RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 NDUFC1O43677 76 aa10.7□□□□□ -0.7
TRAPPC9-210ENST00000521667 C5orf47Q569G3 176 aa10.7□□□□□ -0.7
TRAPPC9-210ENST00000521667 Q5XG85 94 aa10.7□□□□□ -0.7
TRAPPC9-210ENST00000521667 TYMSOSQ8TAI1 123 aa10.69□□□□□ -0.7
TRAPPC9-210ENST00000521667 FAM236DA0A1B0GTK5 79 aa10.68□□□□□ -0.7
TRAPPC9-210ENST00000521667 OXTP01178 125 aa10.68□□□□□ -0.7
TRAPPC9-210ENST00000521667 FAM236CP0DP71 79 aa10.68□□□□□ -0.7
TRAPPC9-210ENST00000521667 EPPK1P58107 5090 aaKnown RBP10.67□□□□□ -0.7
TRAPPC9-210ENST00000521667 KRTAP10-4P60372 401 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC9-210ENST00000521667 LIMD2Q9BT23 127 aa10.65□□□□□ -0.71
TRAPPC9-210ENST00000521667 C4orf48Q5BLP8 95 aa10.63□□□□□ -0.71
TRAPPC9-210ENST00000521667 HSPG2P98160 4391 aa10.63□□□□□ -0.71
TRAPPC9-210ENST00000521667 C1orf195Q5TG92 126 aa10.62□□□□□ -0.71
TRAPPC9-210ENST00000521667 NOTCH2NLQ7Z3S9 236 aa10.62□□□□□ -0.71
TRAPPC9-210ENST00000521667 PRR26Q8N8Z3 221 aa10.62□□□□□ -0.71
TRAPPC9-210ENST00000521667 MP68P56378 58 aa10.62□□□□□ -0.71
TRAPPC9-210ENST00000521667 ZCCHC13Q8WW36 166 aaKnown RBP10.62□□□□□ -0.71
TRAPPC9-210ENST00000521667 SERP1Q9Y6X1 66 aa10.6□□□□□ -0.71
TRAPPC9-210ENST00000521667 SPINK1P00995 79 aa10.6□□□□□ -0.71
TRAPPC9-210ENST00000521667 MRPL34Q9BQ48 92 aaKnown RBP10.6□□□□□ -0.71
TRAPPC9-210ENST00000521667 H0Y9P7 68 aa10.58□□□□□ -0.72
TRAPPC9-210ENST00000521667 TP53AIP1Q9HCN2 124 aa10.58□□□□□ -0.72
TRAPPC9-210ENST00000521667 RYR1P21817 5038 aa10.57□□□□□ -0.72
TRAPPC9-210ENST00000521667 C8orf87E5RJ46 101 aa10.57□□□□□ -0.72
TRAPPC9-210ENST00000521667 ATP5EP56381 51 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC9-210ENST00000521667 LINC00304Q8N9R0 145 aa10.55□□□□□ -0.72
TRAPPC9-210ENST00000521667 H3BPC8 53 aa10.55□□□□□ -0.72
TRAPPC9-210ENST00000521667 LINC00208Q96KT6 92 aa10.55□□□□□ -0.72
TRAPPC9-210ENST00000521667 TRAV22A0A0B4J277 110 aa10.54□□□□□ -0.72
TRAPPC9-210ENST00000521667 NDUFS5O43920 106 aa10.54□□□□□ -0.72
TRAPPC9-210ENST00000521667 KIAA1109Q2LD37 5005 aa10.53□□□□□ -0.72
TRAPPC9-210ENST00000521667 SPAG11AQ6PDA7 123 aa10.53□□□□□ -0.72
TRAPPC9-210ENST00000521667 RPS29P62273 56 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-210ENST00000521667 KRTAP17-1Q9BYP8 105 aa10.51□□□□□ -0.73
TRAPPC9-210ENST00000521667 FAM229AH3BQW9 127 aa10.5□□□□□ -0.73
TRAPPC9-210ENST00000521667 LINC00313P59037 77 aa10.5□□□□□ -0.73
TRAPPC9-210ENST00000521667 C1orf64Q8NEQ6 169 aa10.48□□□□□ -0.73
TRAPPC9-210ENST00000521667 PKHD1L1Q86WI1 4243 aa10.47□□□□□ -0.73
TRAPPC9-210ENST00000521667 C4orf26Q17RF5 130 aa10.46□□□□□ -0.73
TRAPPC9-210ENST00000521667 Q5VSD8 79 aa10.46□□□□□ -0.73
TRAPPC9-210ENST00000521667 SMIM26A0A096LP01 95 aa10.42□□□□□ -0.74
TRAPPC9-210ENST00000521667 Q8N9P0 234 aaPredicted RBP10.4□□□□□ -0.75
TRAPPC9-210ENST00000521667 KRTAP16-1A8MUX0 517 aa10.39□□□□□ -0.75
TRAPPC9-210ENST00000521667 Q5W150 140 aa10.36□□□□□ -0.75
TRAPPC9-210ENST00000521667 FP248Q71RG6 208 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC9-210ENST00000521667 KRTAP13-3Q3SY46 172 aa10.35□□□□□ -0.75
TRAPPC9-210ENST00000521667 LRP1Q07954 4544 aaKnown RBP10.34□□□□□ -0.75
TRAPPC9-210ENST00000521667 SPANXA2-OT1Q8N9U9 137 aa10.33□□□□□ -0.76
TRAPPC9-210ENST00000521667 Q8N1X5 172 aa10.32□□□□□ -0.76
TRAPPC9-210ENST00000521667 CYP4F30PQ9H0H9 118 aa10.32□□□□□ -0.76
TRAPPC9-210ENST00000521667 PRR4Q16378 134 aa10.31□□□□□ -0.76
TRAPPC9-210ENST00000521667 LOC101927531A0A1B0GV80 90 aa10.3□□□□□ -0.76
TRAPPC9-210ENST00000521667 PCOTHQ58A44 107 aa10.29□□□□□ -0.76
TRAPPC9-210ENST00000521667 KRTAP10-8P60410 259 aa10.26□□□□□ -0.77
TRAPPC9-210ENST00000521667 FAT3Q8TDW7 4589 aa10.25□□□□□ -0.77
TRAPPC9-210ENST00000521667 RETNLBQ9BQ08 111 aa10.24□□□□□ -0.77
TRAPPC9-210ENST00000521667 TNXBP22105 4242 aa10.23□□□□□ -0.77
TRAPPC9-210ENST00000521667 IGLV7-46A0A075B6I9 117 aa10.23□□□□□ -0.77
TRAPPC9-210ENST00000521667 MYCBP2O75592 4640 aa10.22□□□□□ -0.77
TRAPPC9-210ENST00000521667 KRTAP4-5Q9BYR2 181 aa10.21□□□□□ -0.77
TRAPPC9-210ENST00000521667 FLG2Q5D862 2391 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC9-210ENST00000521667 BIRC6Q9NR09 4857 aa10.2□□□□□ -0.78
TRAPPC9-210ENST00000521667 C9orf92A6NGG3 77 aa10.16□□□□□ -0.78
TRAPPC9-210ENST00000521667 IGKV2-30P06310 120 aa10.16□□□□□ -0.78
TRAPPC9-210ENST00000521667 MPLKIPQ8TAP9 179 aa10.12□□□□□ -0.79
TRAPPC9-210ENST00000521667 PRO0628Q9UI54 55 aa10.12□□□□□ -0.79
TRAPPC9-210ENST00000521667 C20orf166-AS1Q96NR2 134 aa10.1□□□□□ -0.79
TRAPPC9-210ENST00000521667 A8MUU9 505 aa10.09□□□□□ -0.79
TRAPPC9-210ENST00000521667 HERC2O95714 4834 aa10.08□□□□□ -0.8
TRAPPC9-210ENST00000521667 ABCA13Q86UQ4 5058 aa10.08□□□□□ -0.8
TRAPPC9-210ENST00000521667 IGKV2D-30A0A075B6S6 120 aa10.07□□□□□ -0.8
TRAPPC9-210ENST00000521667 HRES1P13985 223 aa10.07□□□□□ -0.8
TRAPPC9-210ENST00000521667 Q1T7F1 81 aa10.07□□□□□ -0.8
TRAPPC9-210ENST00000521667 MT1HL1P0DM35 61 aa10.06□□□□□ -0.8
TRAPPC9-210ENST00000521667 COA5Q86WW8 74 aa10.04□□□□□ -0.8
TRAPPC9-210ENST00000521667 C7orf65Q6ZTY9 151 aa9.99□□□□□ -0.81
TRAPPC9-210ENST00000521667 BRK1Q8WUW1 75 aa9.97□□□□□ -0.81
TRAPPC9-210ENST00000521667 Q75L30 129 aa9.97□□□□□ -0.81
TRAPPC9-210ENST00000521667 DMAC1Q96GE9 116 aa9.96□□□□□ -0.81
TRAPPC9-210ENST00000521667 DMBT1Q9UGM3 2413 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC9-210ENST00000521667 ACYP2P14621 99 aa9.94□□□□□ -0.82
TRAPPC9-210ENST00000521667 V9GYY9 64 aa9.94□□□□□ -0.82
TRAPPC9-210ENST00000521667 PSPHP1O15172 72 aa9.85□□□□□ -0.83
TRAPPC9-210ENST00000521667 SEC61GP60059 68 aa9.83□□□□□ -0.84
TRAPPC9-210ENST00000521667 XP32Q5T750 250 aa9.83□□□□□ -0.84
TRAPPC9-210ENST00000521667 SPINK7P58062 85 aa9.82□□□□□ -0.84
TRAPPC9-210ENST00000521667 RPL37P61927 97 aaKnown RBP9.82□□□□□ -0.84
TRAPPC9-210ENST00000521667 ATP11AUNQ6ZP68 121 aa9.82□□□□□ -0.84
TRAPPC9-210ENST00000521667 CHKB-CPT1BH3BT56 60 aa9.8□□□□□ -0.84
TRAPPC9-210ENST00000521667 A8MUN3 132 aa9.8□□□□□ -0.84
TRAPPC9-210ENST00000521667 J3QL48 77 aa9.77□□□□□ -0.85
TRAPPC9-210ENST00000521667 Q5VV11 94 aa9.77□□□□□ -0.85
TRAPPC9-210ENST00000521667 PCLOQ9Y6V0 5065 aa9.74□□□□□ -0.85
TRAPPC9-210ENST00000521667 LINC01558Q9Y6Z2 57 aa9.72□□□□□ -0.85
TRAPPC9-210ENST00000521667 TPRXLQ17RH7 258 aa9.7□□□□□ -0.86
TRAPPC9-210ENST00000521667 PRR15LQ9BU68 103 aa9.7□□□□□ -0.86
TRAPPC9-210ENST00000521667 KRTAP3-1Q9BYR8 98 aa9.65□□□□□ -0.86
TRAPPC9-210ENST00000521667 LPAP08519 4548 aa9.64□□□□□ -0.87
TRAPPC9-210ENST00000521667 COX6B2Q6YFQ2 88 aa9.61□□□□□ -0.87
TRAPPC9-210ENST00000521667 A8MU10 97 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms