RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 Q6ZVQ6 151 aa4.3□□□□□ -1.72
CTNNA1-227ENST00000521387 UBL5Q9BZL1 73 aa4.3□□□□□ -1.72
CTNNA1-227ENST00000521387 IGLV5-48A0A075B6I7 105 aa4.29□□□□□ -1.72
CTNNA1-227ENST00000521387 A0A087WVE0 104 aa4.29□□□□□ -1.72
CTNNA1-227ENST00000521387 FAM19A1Q7Z5A9 133 aa4.29□□□□□ -1.72
CTNNA1-227ENST00000521387 C3orf22Q8N5N4 141 aa4.29□□□□□ -1.72
CTNNA1-227ENST00000521387 ATP5EP2Q5VTU8 51 aa4.28□□□□□ -1.72
CTNNA1-227ENST00000521387 SMIM29Q86T20 159 aa4.28□□□□□ -1.72
CTNNA1-227ENST00000521387 A0A1W2PNM2 257 aa4.27□□□□□ -1.73
CTNNA1-227ENST00000521387 CRYGAP11844 174 aa4.27□□□□□ -1.73
CTNNA1-227ENST00000521387 PRLHP81277 87 aa4.27□□□□□ -1.73
CTNNA1-227ENST00000521387 KRTAP6-3Q3LI67 103 aa4.27□□□□□ -1.73
CTNNA1-227ENST00000521387 PKIGQ9Y2B9 76 aa4.26□□□□□ -1.73
CTNNA1-227ENST00000521387 ATOX1O00244 68 aa4.25□□□□□ -1.73
CTNNA1-227ENST00000521387 KRTAP20-1Q3LI63 56 aa4.25□□□□□ -1.73
CTNNA1-227ENST00000521387 MUC12Q9UKN1 5478 aa4.25□□□□□ -1.73
CTNNA1-227ENST00000521387 FLGP20930 4061 aaPredicted RBP4.25□□□□□ -1.73
CTNNA1-227ENST00000521387 A0A0G2JQZ4 141 aa4.24□□□□□ -1.73
CTNNA1-227ENST00000521387 KRTAP1-4P0C5Y4 121 aa4.24□□□□□ -1.73
CTNNA1-227ENST00000521387 CXCL6P80162 114 aa4.24□□□□□ -1.73
CTNNA1-227ENST00000521387 C1orf137Q5JT78 98 aa4.24□□□□□ -1.73
CTNNA1-227ENST00000521387 HIGD2AQ9BW72 106 aa4.24□□□□□ -1.73
CTNNA1-227ENST00000521387 H0Y9J4 135 aa4.23□□□□□ -1.73
CTNNA1-227ENST00000521387 COX7CP15954 63 aa4.23□□□□□ -1.73
CTNNA1-227ENST00000521387 NREPQ16612 68 aa4.23□□□□□ -1.73
CTNNA1-227ENST00000521387 TPRXLQ17RH7 258 aa4.23□□□□□ -1.73
CTNNA1-227ENST00000521387 LINC00474Q9P2X8 69 aa4.23□□□□□ -1.73
CTNNA1-227ENST00000521387 IGLV8-61A0A075B6I0 122 aa4.22□□□□□ -1.73
CTNNA1-227ENST00000521387 UQCRQO14949 82 aa4.22□□□□□ -1.73
CTNNA1-227ENST00000521387 SPRR1BP22528 89 aa4.22□□□□□ -1.73
CTNNA1-227ENST00000521387 UBE2AP49459 152 aa4.22□□□□□ -1.73
CTNNA1-227ENST00000521387 IGFL1Q6UW32 110 aa4.22□□□□□ -1.73
CTNNA1-227ENST00000521387 KRTAP13-1Q8IUC0 172 aa4.22□□□□□ -1.73
CTNNA1-227ENST00000521387 Q8NBF4 154 aa4.22□□□□□ -1.73
CTNNA1-227ENST00000521387 SPRR4Q96PI1 79 aa4.22□□□□□ -1.73
CTNNA1-227ENST00000521387 BCE1O60756 84 aa4.21□□□□□ -1.74
CTNNA1-227ENST00000521387 ASB16-AS1Q495Z4 193 aa4.21□□□□□ -1.74
CTNNA1-227ENST00000521387 SERP2Q8N6R1 65 aa4.21□□□□□ -1.74
CTNNA1-227ENST00000521387 A0A1B0GW54 56 aa4.2□□□□□ -1.74
CTNNA1-227ENST00000521387 F8WEM9 126 aa4.2□□□□□ -1.74
CTNNA1-227ENST00000521387 IGKV4-1P06312 121 aa4.2□□□□□ -1.74
CTNNA1-227ENST00000521387 C9orf153Q5TBE3 101 aa4.2□□□□□ -1.74
CTNNA1-227ENST00000521387 RETNLBQ9BQ08 111 aa4.2□□□□□ -1.74
CTNNA1-227ENST00000521387 SS18L2Q9UHA2 77 aa4.2□□□□□ -1.74
CTNNA1-227ENST00000521387 BPY2O14599 106 aa4.19□□□□□ -1.74
CTNNA1-227ENST00000521387 Q8N9L7 120 aa4.19□□□□□ -1.74
CTNNA1-227ENST00000521387 TRAV7A0A075B6U4 112 aa4.17□□□□□ -1.74
CTNNA1-227ENST00000521387 KRTAP15-1Q3LI76 137 aa4.17□□□□□ -1.74
CTNNA1-227ENST00000521387 CYSTM1Q9H1C7 97 aa4.17□□□□□ -1.74
CTNNA1-227ENST00000521387 DSCR10P59022 87 aa4.16□□□□□ -1.74
CTNNA1-227ENST00000521387 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
CTNNA1-227ENST00000521387 IGLV7-46A0A075B6I9 117 aa4.15□□□□□ -1.75
CTNNA1-227ENST00000521387 A0A087WSZ3 146 aa4.14□□□□□ -1.75
CTNNA1-227ENST00000521387 DEFB116Q30KQ4 102 aa4.14□□□□□ -1.75
CTNNA1-227ENST00000521387 LINC00483Q53H64 154 aa4.14□□□□□ -1.75
CTNNA1-227ENST00000521387 SMIM20Q8N5G0 67 aa4.14□□□□□ -1.75
CTNNA1-227ENST00000521387 GPR98Q8WXG9 6306 aa4.14□□□□□ -1.75
CTNNA1-227ENST00000521387 IGLV9-49A0A0B4J1Y8 123 aa4.12□□□□□ -1.75
CTNNA1-227ENST00000521387 K7EQZ3 153 aa4.12□□□□□ -1.75
CTNNA1-227ENST00000521387 ZNF861PO60384 105 aa4.12□□□□□ -1.75
CTNNA1-227ENST00000521387 IGLV7-43P04211 117 aa4.12□□□□□ -1.75
CTNNA1-227ENST00000521387 C20orf197Q8N268 126 aa4.12□□□□□ -1.75
CTNNA1-227ENST00000521387 ANAPC11Q9NYG5 84 aa4.12□□□□□ -1.75
CTNNA1-227ENST00000521387 KMT2DO14686 5537 aa4.11□□□□□ -1.75
CTNNA1-227ENST00000521387 OCR1Q9BZK8 76 aa4.11□□□□□ -1.75
CTNNA1-227ENST00000521387 LINC00472Q9H8W2 130 aa4.1□□□□□ -1.75
CTNNA1-227ENST00000521387 ZNF706Q9Y5V0 76 aaPredicted RBP4.1□□□□□ -1.75
CTNNA1-227ENST00000521387 M0R2T5 61 aa4.09□□□□□ -1.75
CTNNA1-227ENST00000521387 SNURFQ9Y675 71 aa4.09□□□□□ -1.75
CTNNA1-227ENST00000521387 MOBPQ13875 183 aa4.08□□□□□ -1.76
CTNNA1-227ENST00000521387 HRCT1Q6UXD1 115 aa4.08□□□□□ -1.76
CTNNA1-227ENST00000521387 A0A087X002 238 aa4.07□□□□□ -1.76
CTNNA1-227ENST00000521387 HCG22E2RYF7 251 aa4.07□□□□□ -1.76
CTNNA1-227ENST00000521387 SEC61BP60468 96 aaKnown RBP4.07□□□□□ -1.76
CTNNA1-227ENST00000521387 TMEM258P61165 79 aa4.07□□□□□ -1.76
CTNNA1-227ENST00000521387 KLKP1Q107X0 134 aa4.07□□□□□ -1.76
CTNNA1-227ENST00000521387 WFDC13Q8IUB5 93 aa4.07□□□□□ -1.76
CTNNA1-227ENST00000521387 Q96NJ1 140 aa4.07□□□□□ -1.76
CTNNA1-227ENST00000521387 A8MWP4 228 aa4.06□□□□□ -1.76
CTNNA1-227ENST00000521387 H7BZZ5 65 aa4.06□□□□□ -1.76
CTNNA1-227ENST00000521387 KRTAP13-3Q3SY46 172 aa4.06□□□□□ -1.76
CTNNA1-227ENST00000521387 PRR15Q8IV56 129 aa4.06□□□□□ -1.76
CTNNA1-227ENST00000521387 TMEM254Q8TBM7 123 aa4.06□□□□□ -1.76
CTNNA1-227ENST00000521387 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
CTNNA1-227ENST00000521387 J3KT08 172 aa4.04□□□□□ -1.76
CTNNA1-227ENST00000521387 MMP24-AS1A0A0U1RRL7 71 aa4.03□□□□□ -1.76
CTNNA1-227ENST00000521387 CASC2Q6XLA1 102 aa4.03□□□□□ -1.76
CTNNA1-227ENST00000521387 FAM236DA0A1B0GTK5 79 aa4.02□□□□□ -1.77
CTNNA1-227ENST00000521387 FAM236CP0DP71 79 aa4.02□□□□□ -1.77
CTNNA1-227ENST00000521387 RPS28P62857 69 aaKnown RBP4.02□□□□□ -1.77
CTNNA1-227ENST00000521387 KRTAP19-6Q3LI70 58 aa4.02□□□□□ -1.77
CTNNA1-227ENST00000521387 SSBP3-AS1Q7Z2R9 100 aa4.02□□□□□ -1.77
CTNNA1-227ENST00000521387 SVIPQ8NHG7 77 aa4.02□□□□□ -1.77
CTNNA1-227ENST00000521387 NDUFC1O43677 76 aa4.01□□□□□ -1.77
CTNNA1-227ENST00000521387 KRTAP13-2Q52LG2 175 aa4.01□□□□□ -1.77
CTNNA1-227ENST00000521387 ZCCHC13Q8WW36 166 aaKnown RBP4.01□□□□□ -1.77
CTNNA1-227ENST00000521387 MDN1Q9NU22 5596 aa4.01□□□□□ -1.77
CTNNA1-227ENST00000521387 NDUFB1O75438 58 aa4□□□□□ -1.77
CTNNA1-227ENST00000521387 KRTAP10-7P60409 375 aaPredicted RBP4□□□□□ -1.77
CTNNA1-227ENST00000521387 CD164Q04900 197 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms