RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 LINC00575Q6W349 94 aa7.71□□□□□ -1.18
PRKDC-204ENST00000521331 SVIPQ8NHG7 77 aa7.71□□□□□ -1.18
PRKDC-204ENST00000521331 IGFL1Q6UW32 110 aa7.7□□□□□ -1.18
PRKDC-204ENST00000521331 Q6ZQY7 126 aa7.69□□□□□ -1.18
PRKDC-204ENST00000521331 LINC00643Q86TS7 51 aa7.69□□□□□ -1.18
PRKDC-204ENST00000521331 hADV29S1A0JD25 119 aa7.68□□□□□ -1.18
PRKDC-204ENST00000521331 KRTAP9-7A8MTY7 169 aa7.67□□□□□ -1.18
PRKDC-204ENST00000521331 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.67□□□□□ -1.18
PRKDC-204ENST00000521331 H0YGX0 51 aa7.66□□□□□ -1.18
PRKDC-204ENST00000521331 BAALC-AS2P0C853 105 aa7.65□□□□□ -1.18
PRKDC-204ENST00000521331 Q96NJ1 140 aa7.65□□□□□ -1.18
PRKDC-204ENST00000521331 FAM218AQ96MZ4 157 aa7.64□□□□□ -1.19
PRKDC-204ENST00000521331 KRTAP9-8Q9BYQ0 159 aa7.64□□□□□ -1.19
PRKDC-204ENST00000521331 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.63□□□□□ -1.19
PRKDC-204ENST00000521331 A0A1B0GX51 115 aa7.62□□□□□ -1.19
PRKDC-204ENST00000521331 CCDC179H3BU77 68 aa7.61□□□□□ -1.19
PRKDC-204ENST00000521331 HIST1H4AP62805 103 aaKnown RBP7.61□□□□□ -1.19
PRKDC-204ENST00000521331 C20orf166-AS1Q96NR2 134 aa7.61□□□□□ -1.19
PRKDC-204ENST00000521331 SS18L2Q9UHA2 77 aa7.6□□□□□ -1.19
PRKDC-204ENST00000521331 A8MUU9 505 aa7.59□□□□□ -1.19
PRKDC-204ENST00000521331 USH2AO75445 5202 aa7.57□□□□□ -1.2
PRKDC-204ENST00000521331 SSPOA2VEC9 5147 aa7.56□□□□□ -1.2
PRKDC-204ENST00000521331 UQCRQO14949 82 aa7.55□□□□□ -1.2
PRKDC-204ENST00000521331 FAM236AA0A1B0GUQ0 79 aa7.53□□□□□ -1.2
PRKDC-204ENST00000521331 FAM236BA0A1B0GV22 79 aa7.53□□□□□ -1.2
PRKDC-204ENST00000521331 DNAL4O96015 105 aa7.53□□□□□ -1.2
PRKDC-204ENST00000521331 ATOX1O00244 68 aa7.51□□□□□ -1.21
PRKDC-204ENST00000521331 JMJD7-PLA2G4BH0Y9G9 81 aa7.5□□□□□ -1.21
PRKDC-204ENST00000521331 MT2AP02795 61 aa7.5□□□□□ -1.21
PRKDC-204ENST00000521331 COX7CP15954 63 aa7.5□□□□□ -1.21
PRKDC-204ENST00000521331 ORMDL1Q9P0S3 153 aa7.5□□□□□ -1.21
PRKDC-204ENST00000521331 A0A087WSZ3 146 aa7.49□□□□□ -1.21
PRKDC-204ENST00000521331 FAM236DA0A1B0GTK5 79 aa7.49□□□□□ -1.21
PRKDC-204ENST00000521331 CCKP06307 115 aa7.49□□□□□ -1.21
PRKDC-204ENST00000521331 FAM236CP0DP71 79 aa7.49□□□□□ -1.21
PRKDC-204ENST00000521331 ATP5EP2Q5VTU8 51 aa7.49□□□□□ -1.21
PRKDC-204ENST00000521331 H3BQ85 93 aa7.47□□□□□ -1.21
PRKDC-204ENST00000521331 TMEM256-PLSCR3K7ERE1 68 aa7.47□□□□□ -1.21
PRKDC-204ENST00000521331 DSCR10P59022 87 aa7.47□□□□□ -1.21
PRKDC-204ENST00000521331 LINC00846Q9NV44 126 aa7.47□□□□□ -1.21
PRKDC-204ENST00000521331 FCGBPQ9Y6R7 5405 aaPredicted RBP7.45□□□□□ -1.22
PRKDC-204ENST00000521331 RPS28P62857 69 aaKnown RBP7.45□□□□□ -1.22
PRKDC-204ENST00000521331 C14orf132Q9NPU4 83 aa7.45□□□□□ -1.22
PRKDC-204ENST00000521331 KRTAP19-1Q8IUB9 90 aa7.44□□□□□ -1.22
PRKDC-204ENST00000521331 RBM12B-AS1Q9P1G2 102 aa7.44□□□□□ -1.22
PRKDC-204ENST00000521331 MT1FP04733 61 aa7.43□□□□□ -1.22
PRKDC-204ENST00000521331 LINC00313P59037 77 aa7.43□□□□□ -1.22
PRKDC-204ENST00000521331 SERP2Q8N6R1 65 aa7.43□□□□□ -1.22
PRKDC-204ENST00000521331 LOC110117498A0A087WWA1 95 aa7.42□□□□□ -1.22
PRKDC-204ENST00000521331 KRTAP16-1A8MUX0 517 aa7.42□□□□□ -1.22
PRKDC-204ENST00000521331 KRTAP10-10P60014 251 aa7.41□□□□□ -1.22
PRKDC-204ENST00000521331 MPLKIPQ8TAP9 179 aa7.41□□□□□ -1.22
PRKDC-204ENST00000521331 KRTAP9-3Q9BYQ3 159 aa7.41□□□□□ -1.22
PRKDC-204ENST00000521331 SMIM20Q8N5G0 67 aa7.4□□□□□ -1.22
PRKDC-204ENST00000521331 HRES1P13985 223 aa7.39□□□□□ -1.23
PRKDC-204ENST00000521331 PDE6GP18545 87 aa7.39□□□□□ -1.23
PRKDC-204ENST00000521331 A0A1W2PNM2 257 aa7.38□□□□□ -1.23
PRKDC-204ENST00000521331 IGKV4-1P06312 121 aa7.37□□□□□ -1.23
PRKDC-204ENST00000521331 TMEM258P61165 79 aa7.37□□□□□ -1.23
PRKDC-204ENST00000521331 Q6ZQT0 140 aa7.37□□□□□ -1.23
PRKDC-204ENST00000521331 IGKV3D-7A0A0C4DH55 119 aa7.35□□□□□ -1.23
PRKDC-204ENST00000521331 TRBV7-4A0A0J9YYF1 115 aa7.34□□□□□ -1.23
PRKDC-204ENST00000521331 J3KT08 172 aa7.34□□□□□ -1.23
PRKDC-204ENST00000521331 NOTCH2NLQ7Z3S9 236 aa7.34□□□□□ -1.23
PRKDC-204ENST00000521331 H3BS24 57 aa7.33□□□□□ -1.24
PRKDC-204ENST00000521331 RBM3P98179 157 aaKnown RBP7.33□□□□□ -1.24
PRKDC-204ENST00000521331 UBL5Q9BZL1 73 aa7.33□□□□□ -1.24
PRKDC-204ENST00000521331 CXCL6P80162 114 aa7.31□□□□□ -1.24
PRKDC-204ENST00000521331 A0A087WVE0 104 aa7.3□□□□□ -1.24
PRKDC-204ENST00000521331 LOC100996750A0A140TA64 210 aa7.3□□□□□ -1.24
PRKDC-204ENST00000521331 KRTAP4-6Q9BYQ5 205 aa7.3□□□□□ -1.24
PRKDC-204ENST00000521331 IGHV6-1A0A0B4J1U7 121 aa7.29□□□□□ -1.24
PRKDC-204ENST00000521331 LINC00472Q9H8W2 130 aa7.29□□□□□ -1.24
PRKDC-204ENST00000521331 DEFB116Q30KQ4 102 aa7.28□□□□□ -1.24
PRKDC-204ENST00000521331 CYSTM1Q9H1C7 97 aa7.28□□□□□ -1.24
PRKDC-204ENST00000521331 TRAV7A0A075B6U4 112 aa7.27□□□□□ -1.25
PRKDC-204ENST00000521331 MACF1Q9UPN3 7388 aaKnown RBP7.26□□□□□ -1.25
PRKDC-204ENST00000521331 Q6ZVQ6 151 aa7.26□□□□□ -1.25
PRKDC-204ENST00000521331 C8orf87E5RJ46 101 aa7.25□□□□□ -1.25
PRKDC-204ENST00000521331 KRTAP19-6Q3LI70 58 aa7.25□□□□□ -1.25
PRKDC-204ENST00000521331 DSCR8Q96T75 97 aa7.25□□□□□ -1.25
PRKDC-204ENST00000521331 SYNE2Q8WXH0 6885 aaKnown RBP7.25□□□□□ -1.25
PRKDC-204ENST00000521331 KLKP1Q107X0 134 aa7.23□□□□□ -1.25
PRKDC-204ENST00000521331 A0A1B0GVX0 72 aa7.22□□□□□ -1.25
PRKDC-204ENST00000521331 A0A1B0GW54 56 aa7.22□□□□□ -1.25
PRKDC-204ENST00000521331 ZCCHC13Q8WW36 166 aaKnown RBP7.22□□□□□ -1.25
PRKDC-204ENST00000521331 A8MWP4 228 aa7.2□□□□□ -1.26
PRKDC-204ENST00000521331 SPINK7P58062 85 aa7.2□□□□□ -1.26
PRKDC-204ENST00000521331 H7BZZ5 65 aa7.17□□□□□ -1.26
PRKDC-204ENST00000521331 NDUFC1O43677 76 aa7.17□□□□□ -1.26
PRKDC-204ENST00000521331 C5orf47Q569G3 176 aa7.16□□□□□ -1.26
PRKDC-204ENST00000521331 C20orf197Q8N268 126 aa7.14□□□□□ -1.27
PRKDC-204ENST00000521331 SERP1Q9Y6X1 66 aa7.14□□□□□ -1.27
PRKDC-204ENST00000521331 ATP5EP56381 51 aaPredicted RBP7.13□□□□□ -1.27
PRKDC-204ENST00000521331 WFDC13Q8IUB5 93 aa7.12□□□□□ -1.27
PRKDC-204ENST00000521331 Q8N9P0 234 aaPredicted RBP7.12□□□□□ -1.27
PRKDC-204ENST00000521331 NDUFB1O75438 58 aa7.1□□□□□ -1.27
PRKDC-204ENST00000521331 KRTAP6-3Q3LI67 103 aa7.09□□□□□ -1.27
PRKDC-204ENST00000521331 OCR1Q9BZK8 76 aa7.08□□□□□ -1.28
PRKDC-204ENST00000521331 BPY2O14599 106 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms