RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 KRTAP10-2P60368 255 aa5.97□□□□□ -1.45
SPARC-202ENST00000520687 CIRBP-AS1Q8TBR5 109 aa5.97□□□□□ -1.45
SPARC-202ENST00000520687 DNAH17Q9UFH2 4485 aa5.97□□□□□ -1.45
SPARC-202ENST00000520687 KRTAP29-1A8MX34 341 aaPredicted RBP5.96□□□□□ -1.46
SPARC-202ENST00000520687 MOBPQ13875 183 aa5.96□□□□□ -1.46
SPARC-202ENST00000520687 ZCCHC13Q8WW36 166 aaKnown RBP5.96□□□□□ -1.46
SPARC-202ENST00000520687 DNAH2Q9P225 4427 aa5.96□□□□□ -1.46
SPARC-202ENST00000520687 PKD1P98161 4303 aa5.95□□□□□ -1.46
SPARC-202ENST00000520687 H3BPC8 53 aa5.95□□□□□ -1.46
SPARC-202ENST00000520687 FAM229BQ4G0N7 80 aa5.95□□□□□ -1.46
SPARC-202ENST00000520687 CASC2Q6XLA1 102 aa5.95□□□□□ -1.46
SPARC-202ENST00000520687 SRRM2Q9UQ35 2752 aaKnown RBP5.95□□□□□ -1.46
SPARC-202ENST00000520687 FAM30AQ9NZY2 134 aa5.94□□□□□ -1.46
SPARC-202ENST00000520687 PRO0628Q9UI54 55 aa5.94□□□□□ -1.46
SPARC-202ENST00000520687 DEFB116Q30KQ4 102 aa5.93□□□□□ -1.46
SPARC-202ENST00000520687 MP68P56378 58 aa5.93□□□□□ -1.46
SPARC-202ENST00000520687 KRTAP10-1P60331 282 aa5.93□□□□□ -1.46
SPARC-202ENST00000520687 ASB16-AS1Q495Z4 193 aa5.93□□□□□ -1.46
SPARC-202ENST00000520687 KRTAP9-6A0A140TA67 174 aa5.92□□□□□ -1.46
SPARC-202ENST00000520687 Q96NJ1 140 aa5.92□□□□□ -1.46
SPARC-202ENST00000520687 WFDC13Q8IUB5 93 aa5.91□□□□□ -1.46
SPARC-202ENST00000520687 TP53AIP1Q9HCN2 124 aa5.91□□□□□ -1.46
SPARC-202ENST00000520687 hDV103S1A0JD37 113 aa5.9□□□□□ -1.46
SPARC-202ENST00000520687 APOBP04114 4563 aaKnown RBP5.89□□□□□ -1.47
SPARC-202ENST00000520687 MMP24-AS1A0A0U1RRL7 71 aa5.89□□□□□ -1.47
SPARC-202ENST00000520687 A0A1B0GVX0 72 aa5.89□□□□□ -1.47
SPARC-202ENST00000520687 CYP4F30PQ9H0H9 118 aa5.89□□□□□ -1.47
SPARC-202ENST00000520687 KRTAP9-2Q9BYQ4 174 aa5.88□□□□□ -1.47
SPARC-202ENST00000520687 ANAPC11Q9NYG5 84 aa5.88□□□□□ -1.47
SPARC-202ENST00000520687 C8orf17Q9NRJ1 99 aa5.87□□□□□ -1.47
SPARC-202ENST00000520687 MYCBP2O75592 4640 aa5.87□□□□□ -1.47
SPARC-202ENST00000520687 C8orf87E5RJ46 101 aa5.84□□□□□ -1.47
SPARC-202ENST00000520687 Q1T7F1 81 aa5.84□□□□□ -1.48
SPARC-202ENST00000520687 Q5VSD8 79 aa5.84□□□□□ -1.48
SPARC-202ENST00000520687 C1orf64Q8NEQ6 169 aa5.84□□□□□ -1.48
SPARC-202ENST00000520687 H0Y9P7 68 aa5.83□□□□□ -1.48
SPARC-202ENST00000520687 SPINK6Q6UWN8 80 aa5.83□□□□□ -1.48
SPARC-202ENST00000520687 MPLKIPQ8TAP9 179 aa5.83□□□□□ -1.48
SPARC-202ENST00000520687 LIMD2Q9BT23 127 aa5.83□□□□□ -1.48
SPARC-202ENST00000520687 HMCN2Q8NDA2 5059 aa5.82□□□□□ -1.48
SPARC-202ENST00000520687 DNAH8Q96JB1 4490 aa5.82□□□□□ -1.48
SPARC-202ENST00000520687 IGHV6-1A0A0B4J1U7 121 aa5.82□□□□□ -1.48
SPARC-202ENST00000520687 TRAV22A0A0B4J277 110 aa5.82□□□□□ -1.48
SPARC-202ENST00000520687 MRPL34Q9BQ48 92 aaKnown RBP5.82□□□□□ -1.48
SPARC-202ENST00000520687 FLG2Q5D862 2391 aaPredicted RBP5.82□□□□□ -1.48
SPARC-202ENST00000520687 SPANXA2-OT1Q8N9U9 137 aa5.8□□□□□ -1.48
SPARC-202ENST00000520687 LINC00208Q96KT6 92 aa5.8□□□□□ -1.48
SPARC-202ENST00000520687 LRP1BQ9NZR2 4599 aa5.8□□□□□ -1.48
SPARC-202ENST00000520687 KRTAP13-2Q52LG2 175 aa5.8□□□□□ -1.48
SPARC-202ENST00000520687 KRTAP1-4P0C5Y4 121 aa5.79□□□□□ -1.48
SPARC-202ENST00000520687 BRK1Q8WUW1 75 aa5.79□□□□□ -1.48
SPARC-202ENST00000520687 A0A087X002 238 aa5.78□□□□□ -1.48
SPARC-202ENST00000520687 SPINK1P00995 79 aa5.77□□□□□ -1.49
SPARC-202ENST00000520687 PLA2G1BP04054 148 aaKnown RBP5.77□□□□□ -1.49
SPARC-202ENST00000520687 RPS29P62273 56 aaKnown RBP5.77□□□□□ -1.49
SPARC-202ENST00000520687 SPAG11AQ6PDA7 123 aa5.77□□□□□ -1.49
SPARC-202ENST00000520687 DNAH5Q8TE73 4624 aa5.77□□□□□ -1.49
SPARC-202ENST00000520687 TYMSOSQ8TAI1 123 aa5.76□□□□□ -1.49
SPARC-202ENST00000520687 RNF213Q63HN8 5207 aa5.75□□□□□ -1.49
SPARC-202ENST00000520687 NDUFS5O43920 106 aa5.75□□□□□ -1.49
SPARC-202ENST00000520687 C1orf195Q5TG92 126 aa5.75□□□□□ -1.49
SPARC-202ENST00000520687 V9GYY9 64 aa5.75□□□□□ -1.49
SPARC-202ENST00000520687 LINC00313P59037 77 aa5.74□□□□□ -1.49
SPARC-202ENST00000520687 KRTAP4-8Q9BYQ9 185 aa5.74□□□□□ -1.49
SPARC-202ENST00000520687 FAM229AH3BQW9 127 aa5.73□□□□□ -1.49
SPARC-202ENST00000520687 LOC101927531A0A1B0GV80 90 aa5.72□□□□□ -1.49
SPARC-202ENST00000520687 PRR4Q16378 134 aa5.72□□□□□ -1.49
SPARC-202ENST00000520687 LCE2CQ5TA81 110 aa5.72□□□□□ -1.49
SPARC-202ENST00000520687 IGLV7-46A0A075B6I9 117 aa5.71□□□□□ -1.5
SPARC-202ENST00000520687 XP32Q5T750 250 aa5.71□□□□□ -1.5
SPARC-202ENST00000520687 NOTCH2NLQ7Z3S9 236 aa5.7□□□□□ -1.5
SPARC-202ENST00000520687 Q8N9P0 234 aaPredicted RBP5.7□□□□□ -1.5
SPARC-202ENST00000520687 LINC00304Q8N9R0 145 aa5.68□□□□□ -1.5
SPARC-202ENST00000520687 VPS13BQ7Z7G8 4022 aa5.67□□□□□ -1.5
SPARC-202ENST00000520687 LORP23490 312 aaPredicted RBP5.67□□□□□ -1.5
SPARC-202ENST00000520687 PSPHP1O15172 72 aa5.66□□□□□ -1.5
SPARC-202ENST00000520687 KRTAP13-3Q3SY46 172 aa5.66□□□□□ -1.5
SPARC-202ENST00000520687 Q5VV11 94 aa5.66□□□□□ -1.5
SPARC-202ENST00000520687 A8MUN3 132 aa5.65□□□□□ -1.5
SPARC-202ENST00000520687 FAT1Q14517 4588 aa5.64□□□□□ -1.51
SPARC-202ENST00000520687 SMR3BP02814 79 aaPredicted RBP5.63□□□□□ -1.51
SPARC-202ENST00000520687 KRTAP10-4P60372 401 aaPredicted RBP5.63□□□□□ -1.51
SPARC-202ENST00000520687 PRR26Q8N8Z3 221 aa5.63□□□□□ -1.51
SPARC-202ENST00000520687 KRTAP16-1A8MUX0 517 aa5.63□□□□□ -1.51
SPARC-202ENST00000520687 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.63□□□□□ -1.51
SPARC-202ENST00000520687 COA5Q86WW8 74 aa5.63□□□□□ -1.51
SPARC-202ENST00000520687 PCOTHQ58A44 107 aa5.61□□□□□ -1.51
SPARC-202ENST00000520687 Q5W150 140 aa5.61□□□□□ -1.51
SPARC-202ENST00000520687 Q75L30 129 aa5.6□□□□□ -1.51
SPARC-202ENST00000520687 IGKV2-30P06310 120 aa5.58□□□□□ -1.52
SPARC-202ENST00000520687 PRR15LQ9BU68 103 aa5.58□□□□□ -1.52
SPARC-202ENST00000520687 LINC01558Q9Y6Z2 57 aa5.57□□□□□ -1.52
SPARC-202ENST00000520687 CHKB-CPT1BH3BT56 60 aa5.56□□□□□ -1.52
SPARC-202ENST00000520687 PMAIP1Q13794 54 aa5.56□□□□□ -1.52
SPARC-202ENST00000520687 ACYP2P14621 99 aa5.55□□□□□ -1.52
SPARC-202ENST00000520687 LRP2P98164 4655 aa5.53□□□□□ -1.52
SPARC-202ENST00000520687 HRES1P13985 223 aa5.52□□□□□ -1.53
SPARC-202ENST00000520687 A8MU10 97 aa5.51□□□□□ -1.53
SPARC-202ENST00000520687 DMAC1Q96GE9 116 aa5.51□□□□□ -1.53
SPARC-202ENST00000520687 ATP11AUNQ6ZP68 121 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms