RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 BRK1Q8WUW1 75 aa3.46□□□□□ -1.86
CTNNA1-220ENST00000520260 HIGD2AQ9BW72 106 aa3.46□□□□□ -1.86
CTNNA1-220ENST00000520260 KIAA1109Q2LD37 5005 aa3.46□□□□□ -1.86
CTNNA1-220ENST00000520260 LRP1BQ9NZR2 4599 aa3.45□□□□□ -1.86
CTNNA1-220ENST00000520260 DNAH5Q8TE73 4624 aa3.45□□□□□ -1.86
CTNNA1-220ENST00000520260 Q1T7F1 81 aa3.45□□□□□ -1.86
CTNNA1-220ENST00000520260 Q6ZRX8 168 aa3.45□□□□□ -1.86
CTNNA1-220ENST00000520260 PRR15Q8IV56 129 aa3.45□□□□□ -1.86
CTNNA1-220ENST00000520260 ZCCHC13Q8WW36 166 aaKnown RBP3.45□□□□□ -1.86
CTNNA1-220ENST00000520260 DYNC1H1Q14204 4646 aaKnown RBP3.45□□□□□ -1.86
CTNNA1-220ENST00000520260 RYR1P21817 5038 aa3.44□□□□□ -1.86
CTNNA1-220ENST00000520260 IGLV5-48A0A075B6I7 105 aa3.44□□□□□ -1.86
CTNNA1-220ENST00000520260 CYP4F30PQ9H0H9 118 aa3.44□□□□□ -1.86
CTNNA1-220ENST00000520260 SPRR1AP35321 89 aa3.43□□□□□ -1.86
CTNNA1-220ENST00000520260 SEC61GP60059 68 aa3.43□□□□□ -1.86
CTNNA1-220ENST00000520260 PRLHP81277 87 aa3.43□□□□□ -1.86
CTNNA1-220ENST00000520260 SPAG11AQ6PDA7 123 aa3.43□□□□□ -1.86
CTNNA1-220ENST00000520260 TYMSOSQ8TAI1 123 aa3.43□□□□□ -1.86
CTNNA1-220ENST00000520260 DMBT1Q9UGM3 2413 aaPredicted RBP3.43□□□□□ -1.86
CTNNA1-220ENST00000520260 SRRM2Q9UQ35 2752 aaKnown RBP3.43□□□□□ -1.86
CTNNA1-220ENST00000520260 KRTAP10-4P60372 401 aaPredicted RBP3.42□□□□□ -1.86
CTNNA1-220ENST00000520260 KRTAP7-1Q8IUC3 87 aa3.42□□□□□ -1.86
CTNNA1-220ENST00000520260 MPLKIPQ8TAP9 179 aa3.42□□□□□ -1.86
CTNNA1-220ENST00000520260 HERC2O95714 4834 aa3.42□□□□□ -1.86
CTNNA1-220ENST00000520260 Q8N9L7 120 aa3.41□□□□□ -1.86
CTNNA1-220ENST00000520260 HSPG2P98160 4391 aa3.41□□□□□ -1.86
CTNNA1-220ENST00000520260 APOBP04114 4563 aaKnown RBP3.41□□□□□ -1.86
CTNNA1-220ENST00000520260 SMIM29Q86T20 159 aa3.4□□□□□ -1.87
CTNNA1-220ENST00000520260 KRTAP13-1Q8IUC0 172 aa3.4□□□□□ -1.87
CTNNA1-220ENST00000520260 Q8N377 158 aa3.4□□□□□ -1.87
CTNNA1-220ENST00000520260 Q8NBF4 154 aa3.4□□□□□ -1.87
CTNNA1-220ENST00000520260 C1orf64Q8NEQ6 169 aa3.4□□□□□ -1.87
CTNNA1-220ENST00000520260 SPRR4Q96PI1 79 aa3.4□□□□□ -1.87
CTNNA1-220ENST00000520260 PCLOQ9Y6V0 5065 aa3.4□□□□□ -1.87
CTNNA1-220ENST00000520260 A0A1W2PNM2 257 aa3.39□□□□□ -1.87
CTNNA1-220ENST00000520260 NDUFB1O75438 58 aa3.39□□□□□ -1.87
CTNNA1-220ENST00000520260 PMAIP1Q13794 54 aa3.39□□□□□ -1.87
CTNNA1-220ENST00000520260 SSBP3-AS1Q7Z2R9 100 aa3.39□□□□□ -1.87
CTNNA1-220ENST00000520260 LIMD2Q9BT23 127 aa3.39□□□□□ -1.87
CTNNA1-220ENST00000520260 KRTAP4-16G5E9R7 235 aaPredicted RBP3.38□□□□□ -1.87
CTNNA1-220ENST00000520260 DSCR10P59022 87 aa3.38□□□□□ -1.87
CTNNA1-220ENST00000520260 LINC00483Q53H64 154 aa3.38□□□□□ -1.87
CTNNA1-220ENST00000520260 LINC00304Q8N9R0 145 aa3.38□□□□□ -1.87
CTNNA1-220ENST00000520260 TRAV22A0A0B4J277 110 aa3.37□□□□□ -1.87
CTNNA1-220ENST00000520260 H3BPC8 53 aa3.37□□□□□ -1.87
CTNNA1-220ENST00000520260 SPINK1P00995 79 aa3.37□□□□□ -1.87
CTNNA1-220ENST00000520260 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
CTNNA1-220ENST00000520260 KRTAP11-1Q8IUC1 163 aa3.37□□□□□ -1.87
CTNNA1-220ENST00000520260 PRR26Q8N8Z3 221 aa3.37□□□□□ -1.87
CTNNA1-220ENST00000520260 FLG2Q5D862 2391 aaPredicted RBP3.37□□□□□ -1.87
CTNNA1-220ENST00000520260 IGLV9-49A0A0B4J1Y8 123 aa3.36□□□□□ -1.87
CTNNA1-220ENST00000520260 HCG22E2RYF7 251 aa3.36□□□□□ -1.87
CTNNA1-220ENST00000520260 RPS29P62273 56 aaKnown RBP3.36□□□□□ -1.87
CTNNA1-220ENST00000520260 SPANXA2-OT1Q8N9U9 137 aa3.36□□□□□ -1.87
CTNNA1-220ENST00000520260 Q9BRP9 147 aa3.36□□□□□ -1.87
CTNNA1-220ENST00000520260 VPS13BQ7Z7G8 4022 aa3.36□□□□□ -1.87
CTNNA1-220ENST00000520260 DNAH8Q96JB1 4490 aa3.36□□□□□ -1.87
CTNNA1-220ENST00000520260 KRTAP1-4P0C5Y4 121 aa3.35□□□□□ -1.87
CTNNA1-220ENST00000520260 SPRR1BP22528 89 aa3.35□□□□□ -1.87
CTNNA1-220ENST00000520260 KRTAP10-8P60410 259 aa3.35□□□□□ -1.87
CTNNA1-220ENST00000520260 MOBPQ13875 183 aa3.35□□□□□ -1.87
CTNNA1-220ENST00000520260 DEFB105AQ8NG35 78 aa3.35□□□□□ -1.87
CTNNA1-220ENST00000520260 MP68P56378 58 aa3.34□□□□□ -1.87
CTNNA1-220ENST00000520260 CD164Q04900 197 aa3.34□□□□□ -1.87
CTNNA1-220ENST00000520260 ST20-AS1Q8NBB2 130 aa3.34□□□□□ -1.87
CTNNA1-220ENST00000520260 IGLV8-61A0A075B6I0 122 aa3.33□□□□□ -1.88
CTNNA1-220ENST00000520260 K7EQZ3 153 aa3.33□□□□□ -1.88
CTNNA1-220ENST00000520260 Q5VV11 94 aa3.33□□□□□ -1.88
CTNNA1-220ENST00000520260 ABCA13Q86UQ4 5058 aa3.33□□□□□ -1.88
CTNNA1-220ENST00000520260 A0A087X002 238 aa3.32□□□□□ -1.88
CTNNA1-220ENST00000520260 A8MUN3 132 aa3.32□□□□□ -1.88
CTNNA1-220ENST00000520260 PSPHP1O15172 72 aa3.32□□□□□ -1.88
CTNNA1-220ENST00000520260 FAT1Q14517 4588 aa3.31□□□□□ -1.88
CTNNA1-220ENST00000520260 LOC101927531A0A1B0GV80 90 aa3.31□□□□□ -1.88
CTNNA1-220ENST00000520260 MT1HL1P0DM35 61 aa3.31□□□□□ -1.88
CTNNA1-220ENST00000520260 PRR4Q16378 134 aa3.31□□□□□ -1.88
CTNNA1-220ENST00000520260 Q8N9P0 234 aaPredicted RBP3.31□□□□□ -1.88
CTNNA1-220ENST00000520260 LINC00208Q96KT6 92 aa3.31□□□□□ -1.88
CTNNA1-220ENST00000520260 NDUFS5O43920 106 aa3.3□□□□□ -1.88
CTNNA1-220ENST00000520260 ATP11AUNQ6ZP68 121 aa3.3□□□□□ -1.88
CTNNA1-220ENST00000520260 Q75L30 129 aa3.3□□□□□ -1.88
CTNNA1-220ENST00000520260 ANAPC11Q9NYG5 84 aa3.3□□□□□ -1.88
CTNNA1-220ENST00000520260 H0Y9P7 68 aa3.29□□□□□ -1.88
CTNNA1-220ENST00000520260 KTN1-AS1Q86SY8 53 aa3.29□□□□□ -1.88
CTNNA1-220ENST00000520260 MYCBP2O75592 4640 aa3.28□□□□□ -1.88
CTNNA1-220ENST00000520260 CHKB-CPT1BH3BT56 60 aa3.28□□□□□ -1.88
CTNNA1-220ENST00000520260 KRTAP13-2Q52LG2 175 aa3.28□□□□□ -1.88
CTNNA1-220ENST00000520260 IGFL1Q6UW32 110 aa3.28□□□□□ -1.88
CTNNA1-220ENST00000520260 IGLV7-46A0A075B6I9 117 aa3.27□□□□□ -1.89
CTNNA1-220ENST00000520260 CASC2Q6XLA1 102 aa3.27□□□□□ -1.89
CTNNA1-220ENST00000520260 WFDC13Q8IUB5 93 aa3.27□□□□□ -1.89
CTNNA1-220ENST00000520260 PRR15LQ9BU68 103 aa3.27□□□□□ -1.89
CTNNA1-220ENST00000520260 A6NN06 94 aa3.26□□□□□ -1.89
CTNNA1-220ENST00000520260 A8MWP4 228 aa3.26□□□□□ -1.89
CTNNA1-220ENST00000520260 LINC01558Q9Y6Z2 57 aa3.26□□□□□ -1.89
CTNNA1-220ENST00000520260 A0A087WSZ3 146 aa3.25□□□□□ -1.89
CTNNA1-220ENST00000520260 TPRXLQ17RH7 258 aa3.25□□□□□ -1.89
CTNNA1-220ENST00000520260 LCA10Q71F78 164 aa3.25□□□□□ -1.89
CTNNA1-220ENST00000520260 COA5Q86WW8 74 aa3.25□□□□□ -1.89
CTNNA1-220ENST00000520260 LINC00472Q9H8W2 130 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms