RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 DEFB116Q30KQ4 102 aa7.87□□□□□ -1.15
SDC2-203ENST00000519587 BPY2O14599 106 aa7.86□□□□□ -1.15
SDC2-203ENST00000519587 KRTAP13-3Q3SY46 172 aa7.85□□□□□ -1.15
SDC2-203ENST00000519587 A8MWP4 228 aa7.83□□□□□ -1.16
SDC2-203ENST00000519587 CDIP1Q9H305 208 aa7.83□□□□□ -1.16
SDC2-203ENST00000519587 A0A1B0GVX0 72 aa7.82□□□□□ -1.16
SDC2-203ENST00000519587 K7ERU9 68 aa7.82□□□□□ -1.16
SDC2-203ENST00000519587 IGHV6-1A0A0B4J1U7 121 aa7.81□□□□□ -1.16
SDC2-203ENST00000519587 C9orf92A6NGG3 77 aa7.8□□□□□ -1.16
SDC2-203ENST00000519587 C8orf87E5RJ46 101 aa7.8□□□□□ -1.16
SDC2-203ENST00000519587 ATP5EP2Q5VTU8 51 aa7.8□□□□□ -1.16
SDC2-203ENST00000519587 CXCL6P80162 114 aa7.79□□□□□ -1.16
SDC2-203ENST00000519587 IGKV3D-7A0A0C4DH55 119 aa7.77□□□□□ -1.17
SDC2-203ENST00000519587 DSCR10P59022 87 aa7.77□□□□□ -1.17
SDC2-203ENST00000519587 LINC00313P59037 77 aa7.77□□□□□ -1.17
SDC2-203ENST00000519587 PRR15Q8IV56 129 aa7.77□□□□□ -1.17
SDC2-203ENST00000519587 K7EQZ3 153 aa7.75□□□□□ -1.17
SDC2-203ENST00000519587 LINC00643Q86TS7 51 aa7.75□□□□□ -1.17
SDC2-203ENST00000519587 XP32Q5T750 250 aa7.73□□□□□ -1.17
SDC2-203ENST00000519587 C8orf17Q9NRJ1 99 aa7.73□□□□□ -1.17
SDC2-203ENST00000519587 FAT4Q6V0I7 4981 aa7.72□□□□□ -1.17
SDC2-203ENST00000519587 Q8N9L7 120 aa7.71□□□□□ -1.18
SDC2-203ENST00000519587 MMP24-AS1A0A0U1RRL7 71 aa7.68□□□□□ -1.18
SDC2-203ENST00000519587 NOTCH2NLQ7Z3S9 236 aa7.68□□□□□ -1.18
SDC2-203ENST00000519587 Q75L30 129 aa7.67□□□□□ -1.18
SDC2-203ENST00000519587 hDV103S1A0JD37 113 aa7.66□□□□□ -1.18
SDC2-203ENST00000519587 SEC61BP60468 96 aaKnown RBP7.66□□□□□ -1.18
SDC2-203ENST00000519587 RPL37P61927 97 aaKnown RBP7.66□□□□□ -1.18
SDC2-203ENST00000519587 TMEM254Q8TBM7 123 aa7.66□□□□□ -1.18
SDC2-203ENST00000519587 C20orf166-AS1Q96NR2 134 aa7.66□□□□□ -1.18
SDC2-203ENST00000519587 LPAP08519 4548 aa7.66□□□□□ -1.18
SDC2-203ENST00000519587 KRTAP16-1A8MUX0 517 aa7.65□□□□□ -1.18
SDC2-203ENST00000519587 HCG22E2RYF7 251 aa7.65□□□□□ -1.18
SDC2-203ENST00000519587 HIST1H4AP62805 103 aaKnown RBP7.65□□□□□ -1.18
SDC2-203ENST00000519587 CASC2Q6XLA1 102 aa7.65□□□□□ -1.18
SDC2-203ENST00000519587 KRTAP3-3Q9BYR6 98 aa7.65□□□□□ -1.18
SDC2-203ENST00000519587 KRTAP3-2Q9BYR7 98 aa7.65□□□□□ -1.18
SDC2-203ENST00000519587 MUC2Q02817 5179 aa7.64□□□□□ -1.19
SDC2-203ENST00000519587 A0A0U1RQV1 116 aa7.63□□□□□ -1.19
SDC2-203ENST00000519587 A8MUU9 505 aa7.63□□□□□ -1.19
SDC2-203ENST00000519587 WFDC13Q8IUB5 93 aa7.63□□□□□ -1.19
SDC2-203ENST00000519587 MRPL34Q9BQ48 92 aaKnown RBP7.63□□□□□ -1.19
SDC2-203ENST00000519587 ATP11AUNQ6ZP68 121 aa7.61□□□□□ -1.19
SDC2-203ENST00000519587 Q8N9P0 234 aaPredicted RBP7.59□□□□□ -1.19
SDC2-203ENST00000519587 NDUFS5O43920 106 aa7.58□□□□□ -1.2
SDC2-203ENST00000519587 PCOTHQ58A44 107 aa7.55□□□□□ -1.2
SDC2-203ENST00000519587 LCE2AQ5TA79 106 aaPredicted RBP7.55□□□□□ -1.2
SDC2-203ENST00000519587 IMUPQ9GZP8 106 aa7.55□□□□□ -1.2
SDC2-203ENST00000519587 A0A087WVE0 104 aa7.53□□□□□ -1.2
SDC2-203ENST00000519587 MT-ATP8P03928 68 aa7.53□□□□□ -1.2
SDC2-203ENST00000519587 ZCCHC13Q8WW36 166 aaKnown RBP7.52□□□□□ -1.21
SDC2-203ENST00000519587 TP53AIP1Q9HCN2 124 aa7.5□□□□□ -1.21
SDC2-203ENST00000519587 SCGB1A1P11684 91 aa7.44□□□□□ -1.22
SDC2-203ENST00000519587 FSIP2Q5CZC0 6907 aa7.41□□□□□ -1.22
SDC2-203ENST00000519587 FAM236AA0A1B0GUQ0 79 aa7.41□□□□□ -1.22
SDC2-203ENST00000519587 FAM236BA0A1B0GV22 79 aa7.41□□□□□ -1.22
SDC2-203ENST00000519587 UQCRQO14949 82 aa7.41□□□□□ -1.22
SDC2-203ENST00000519587 MUC17Q685J3 4493 aa7.4□□□□□ -1.22
SDC2-203ENST00000519587 TRAV22A0A0B4J277 110 aa7.39□□□□□ -1.23
SDC2-203ENST00000519587 CRCT1Q9UGL9 99 aa7.39□□□□□ -1.23
SDC2-203ENST00000519587 Q5W150 140 aa7.37□□□□□ -1.23
SDC2-203ENST00000519587 SMIM20Q8N5G0 67 aa7.36□□□□□ -1.23
SDC2-203ENST00000519587 KRTAP4-1Q9BYQ7 146 aa7.36□□□□□ -1.23
SDC2-203ENST00000519587 OCR1Q9BZK8 76 aa7.36□□□□□ -1.23
SDC2-203ENST00000519587 ATOX1O00244 68 aa7.35□□□□□ -1.23
SDC2-203ENST00000519587 SPINK7P58062 85 aa7.35□□□□□ -1.23
SDC2-203ENST00000519587 C7orf65Q6ZTY9 151 aa7.35□□□□□ -1.23
SDC2-203ENST00000519587 IGKV2D-30A0A075B6S6 120 aa7.34□□□□□ -1.23
SDC2-203ENST00000519587 IGKV2-30P06310 120 aa7.34□□□□□ -1.23
SDC2-203ENST00000519587 H0Y9P7 68 aa7.32□□□□□ -1.24
SDC2-203ENST00000519587 MP68P56378 58 aa7.31□□□□□ -1.24
SDC2-203ENST00000519587 LOC101927531A0A1B0GV80 90 aa7.3□□□□□ -1.24
SDC2-203ENST00000519587 TRAV7A0A075B6U4 112 aa7.29□□□□□ -1.24
SDC2-203ENST00000519587 C5orf47Q569G3 176 aa7.29□□□□□ -1.24
SDC2-203ENST00000519587 RBM12B-AS1Q9P1G2 102 aa7.27□□□□□ -1.25
SDC2-203ENST00000519587 H3BPC8 53 aa7.26□□□□□ -1.25
SDC2-203ENST00000519587 HRES1P13985 223 aa7.25□□□□□ -1.25
SDC2-203ENST00000519587 COX6B2Q6YFQ2 88 aa7.24□□□□□ -1.25
SDC2-203ENST00000519587 C1orf64Q8NEQ6 169 aa7.24□□□□□ -1.25
SDC2-203ENST00000519587 LINC00208Q96KT6 92 aa7.24□□□□□ -1.25
SDC2-203ENST00000519587 FAM236DA0A1B0GTK5 79 aa7.22□□□□□ -1.25
SDC2-203ENST00000519587 FAM236CP0DP71 79 aa7.22□□□□□ -1.25
SDC2-203ENST00000519587 CYP4F30PQ9H0H9 118 aa7.22□□□□□ -1.25
SDC2-203ENST00000519587 SERP2Q8N6R1 65 aa7.21□□□□□ -1.26
SDC2-203ENST00000519587 MPLKIPQ8TAP9 179 aa7.19□□□□□ -1.26
SDC2-203ENST00000519587 KRTAP19-2Q3LHN2 52 aa7.14□□□□□ -1.27
SDC2-203ENST00000519587 C4orf26Q17RF5 130 aa7.13□□□□□ -1.27
SDC2-203ENST00000519587 ANAPC13Q9BS18 74 aa7.12□□□□□ -1.27
SDC2-203ENST00000519587 COX7CP15954 63 aa7.1□□□□□ -1.27
SDC2-203ENST00000519587 C20orf197Q8N268 126 aa7.1□□□□□ -1.27
SDC2-203ENST00000519587 LCE2CQ5TA81 110 aa7.09□□□□□ -1.27
SDC2-203ENST00000519587 KLKP1Q107X0 134 aa7.07□□□□□ -1.28
SDC2-203ENST00000519587 SNURFQ9Y675 71 aa7.07□□□□□ -1.28
SDC2-203ENST00000519587 H1FX-AS1Q4G0G2 97 aa7.05□□□□□ -1.28
SDC2-203ENST00000519587 A8MUN3 132 aa7.02□□□□□ -1.29
SDC2-203ENST00000519587 KRTAP9-7A8MTY7 169 aa7.01□□□□□ -1.29
SDC2-203ENST00000519587 M0R2T5 61 aa7□□□□□ -1.29
SDC2-203ENST00000519587 MT1HP80294 61 aa7□□□□□ -1.29
SDC2-203ENST00000519587 NDUFC1O43677 76 aa6.98□□□□□ -1.29
SDC2-203ENST00000519587 KRTAP3-1Q9BYR8 98 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms