RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 FAM236DA0A1B0GTK5 79 aa4.12□□□□□ -1.75
CTNNA1-215ENST00000519309 FAM236CP0DP71 79 aa4.12□□□□□ -1.75
CTNNA1-215ENST00000519309 DSCR10P59022 87 aa4.11□□□□□ -1.75
CTNNA1-215ENST00000519309 SS18L2Q9UHA2 77 aa4.11□□□□□ -1.75
CTNNA1-215ENST00000519309 KRTAP16-1A8MUX0 517 aa4.1□□□□□ -1.75
CTNNA1-215ENST00000519309 HRES1P13985 223 aa4.1□□□□□ -1.75
CTNNA1-215ENST00000519309 PSMB2P49721 201 aa4.1□□□□□ -1.75
CTNNA1-215ENST00000519309 NOTCH2NLQ7Z3S9 236 aa4.1□□□□□ -1.75
CTNNA1-215ENST00000519309 SNCGO76070 127 aa4.09□□□□□ -1.75
CTNNA1-215ENST00000519309 DEFB116Q30KQ4 102 aa4.09□□□□□ -1.75
CTNNA1-215ENST00000519309 ORMDL1Q9P0S3 153 aa4.09□□□□□ -1.75
CTNNA1-215ENST00000519309 RBM12B-AS1Q9P1G2 102 aa4.09□□□□□ -1.75
CTNNA1-215ENST00000519309 UQCR10Q9UDW1 63 aa4.09□□□□□ -1.75
CTNNA1-215ENST00000519309 NEBP20929 6669 aa4.09□□□□□ -1.75
CTNNA1-215ENST00000519309 SIGMAR1Q99720 223 aa4.08□□□□□ -1.76
CTNNA1-215ENST00000519309 KRTAP4-12Q9BQ66 201 aa4.08□□□□□ -1.76
CTNNA1-215ENST00000519309 TRBV7-4A0A0J9YYF1 115 aa4.07□□□□□ -1.76
CTNNA1-215ENST00000519309 DNAL4O96015 105 aa4.07□□□□□ -1.76
CTNNA1-215ENST00000519309 PCP4P48539 62 aa4.07□□□□□ -1.76
CTNNA1-215ENST00000519309 ANKRD29Q8N6D5 301 aa4.07□□□□□ -1.76
CTNNA1-215ENST00000519309 IGKV4-1P06312 121 aa4.06□□□□□ -1.76
CTNNA1-215ENST00000519309 LINC00472Q9H8W2 130 aa4.06□□□□□ -1.76
CTNNA1-215ENST00000519309 TMEM256-PLSCR3K7ERE1 68 aa4.05□□□□□ -1.76
CTNNA1-215ENST00000519309 CCKP06307 115 aa4.05□□□□□ -1.76
CTNNA1-215ENST00000519309 KRTAP4-7Q9BYR0 210 aa4.05□□□□□ -1.76
CTNNA1-215ENST00000519309 MUC12Q9UKN1 5478 aa4.04□□□□□ -1.76
CTNNA1-215ENST00000519309 TRACP01848 142 aa4.04□□□□□ -1.76
CTNNA1-215ENST00000519309 UBE2V1Q13404 147 aa4.04□□□□□ -1.76
CTNNA1-215ENST00000519309 NAA38Q9BRA0 125 aaKnown RBP4.04□□□□□ -1.76
CTNNA1-215ENST00000519309 A8MWP4 228 aa4.03□□□□□ -1.76
CTNNA1-215ENST00000519309 COX6CP09669 75 aa4.03□□□□□ -1.76
CTNNA1-215ENST00000519309 LINC00313P59037 77 aa4.03□□□□□ -1.76
CTNNA1-215ENST00000519309 IGHV6-1A0A0B4J1U7 121 aa4.02□□□□□ -1.77
CTNNA1-215ENST00000519309 H3BQ85 93 aa4.02□□□□□ -1.77
CTNNA1-215ENST00000519309 SCGB1C2P0DMR2 95 aa4.02□□□□□ -1.77
CTNNA1-215ENST00000519309 VPS25Q9BRG1 176 aa4.02□□□□□ -1.77
CTNNA1-215ENST00000519309 Q8N9P0 234 aaPredicted RBP4.01□□□□□ -1.77
CTNNA1-215ENST00000519309 BAALC-AS2P0C853 105 aa4□□□□□ -1.77
CTNNA1-215ENST00000519309 KRTAP5-9P26371 169 aa4□□□□□ -1.77
CTNNA1-215ENST00000519309 KRTAP3-1Q9BYR8 98 aa4□□□□□ -1.77
CTNNA1-215ENST00000519309 A0A1B0GVX0 72 aa3.99□□□□□ -1.77
CTNNA1-215ENST00000519309 RBM3P98179 157 aaKnown RBP3.99□□□□□ -1.77
CTNNA1-215ENST00000519309 MTURNQ8N3F0 131 aa3.99□□□□□ -1.77
CTNNA1-215ENST00000519309 M0R143 59 aa3.97□□□□□ -1.77
CTNNA1-215ENST00000519309 SMIM6P0DI80 62 aa3.97□□□□□ -1.77
CTNNA1-215ENST00000519309 KRTAP19-4Q3LI73 84 aa3.97□□□□□ -1.77
CTNNA1-215ENST00000519309 Q6ZQT0 140 aa3.97□□□□□ -1.77
CTNNA1-215ENST00000519309 DSCR8Q96T75 97 aa3.97□□□□□ -1.77
CTNNA1-215ENST00000519309 C9JAW5 83 aa3.96□□□□□ -1.78
CTNNA1-215ENST00000519309 LOC105371267A0A1B0GV96 52 aa3.95□□□□□ -1.78
CTNNA1-215ENST00000519309 C8orf87E5RJ46 101 aa3.95□□□□□ -1.78
CTNNA1-215ENST00000519309 ATXN8Q156A1 80 aa3.95□□□□□ -1.78
CTNNA1-215ENST00000519309 LOC110117498A0A087WWA1 95 aa3.94□□□□□ -1.78
CTNNA1-215ENST00000519309 BATFQ16520 125 aa3.94□□□□□ -1.78
CTNNA1-215ENST00000519309 C14orf132Q9NPU4 83 aa3.94□□□□□ -1.78
CTNNA1-215ENST00000519309 IGKV3D-7A0A0C4DH55 119 aa3.93□□□□□ -1.78
CTNNA1-215ENST00000519309 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
CTNNA1-215ENST00000519309 ZCCHC13Q8WW36 166 aaKnown RBP3.93□□□□□ -1.78
CTNNA1-215ENST00000519309 KMT2DO14686 5537 aa3.92□□□□□ -1.78
CTNNA1-215ENST00000519309 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
CTNNA1-215ENST00000519309 A6NN06 94 aa3.92□□□□□ -1.78
CTNNA1-215ENST00000519309 J3KT08 172 aa3.92□□□□□ -1.78
CTNNA1-215ENST00000519309 KRTAP2-3P0C7H8 128 aa3.92□□□□□ -1.78
CTNNA1-215ENST00000519309 KRTAP2-4Q9BYR9 128 aa3.92□□□□□ -1.78
CTNNA1-215ENST00000519309 C8orf17Q9NRJ1 99 aa3.92□□□□□ -1.78
CTNNA1-215ENST00000519309 TSTD3H0UI37 97 aa3.91□□□□□ -1.78
CTNNA1-215ENST00000519309 SPINK7P58062 85 aa3.91□□□□□ -1.78
CTNNA1-215ENST00000519309 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
CTNNA1-215ENST00000519309 JMJD7-PLA2G4BH0Y9G9 81 aa3.9□□□□□ -1.79
CTNNA1-215ENST00000519309 MDN1Q9NU22 5596 aa3.89□□□□□ -1.79
CTNNA1-215ENST00000519309 TAX1BP3O14907 124 aa3.89□□□□□ -1.79
CTNNA1-215ENST00000519309 MMP24-AS1A0A0U1RRL7 71 aa3.88□□□□□ -1.79
CTNNA1-215ENST00000519309 LYRM7Q5U5X0 104 aa3.88□□□□□ -1.79
CTNNA1-215ENST00000519309 A0A1B0GW54 56 aa3.87□□□□□ -1.79
CTNNA1-215ENST00000519309 NDUFB1O75438 58 aa3.87□□□□□ -1.79
CTNNA1-215ENST00000519309 Q6ZVQ6 151 aa3.87□□□□□ -1.79
CTNNA1-215ENST00000519309 WFDC13Q8IUB5 93 aa3.87□□□□□ -1.79
CTNNA1-215ENST00000519309 PRR15Q8IV56 129 aa3.87□□□□□ -1.79
CTNNA1-215ENST00000519309 A0A1W2PPM0 123 aa3.86□□□□□ -1.79
CTNNA1-215ENST00000519309 K7EQZ3 153 aa3.86□□□□□ -1.79
CTNNA1-215ENST00000519309 MT1BP07438 61 aa3.86□□□□□ -1.79
CTNNA1-215ENST00000519309 PDE6GP18545 87 aa3.86□□□□□ -1.79
CTNNA1-215ENST00000519309 KRTAP10-5P60370 271 aa3.85□□□□□ -1.79
CTNNA1-215ENST00000519309 NREPQ16612 68 aa3.85□□□□□ -1.79
CTNNA1-215ENST00000519309 LCE1DQ5T752 114 aa3.85□□□□□ -1.79
CTNNA1-215ENST00000519309 H3BT86 120 aa3.84□□□□□ -1.79
CTNNA1-215ENST00000519309 Q8N9L7 120 aa3.83□□□□□ -1.8
CTNNA1-215ENST00000519309 TMEM254Q8TBM7 123 aa3.83□□□□□ -1.8
CTNNA1-215ENST00000519309 MRPL34Q9BQ48 92 aaKnown RBP3.83□□□□□ -1.8
CTNNA1-215ENST00000519309 KRTAP4-9Q9BYQ8 210 aa3.83□□□□□ -1.8
CTNNA1-215ENST00000519309 KRTAP19-8Q3LI54 63 aa3.82□□□□□ -1.8
CTNNA1-215ENST00000519309 Q5W150 140 aa3.82□□□□□ -1.8
CTNNA1-215ENST00000519309 hDV103S1A0JD37 113 aa3.81□□□□□ -1.8
CTNNA1-215ENST00000519309 Q5VV11 94 aa3.81□□□□□ -1.8
CTNNA1-215ENST00000519309 SPCS1Q9Y6A9 102 aa3.8□□□□□ -1.8
CTNNA1-215ENST00000519309 BPY2O14599 106 aa3.79□□□□□ -1.8
CTNNA1-215ENST00000519309 H1FX-AS1Q4G0G2 97 aa3.79□□□□□ -1.8
CTNNA1-215ENST00000519309 NDUFS5O43920 106 aa3.78□□□□□ -1.8
CTNNA1-215ENST00000519309 SPRR2GQ9BYE4 73 aa3.78□□□□□ -1.8
CTNNA1-215ENST00000519309 KRTAP2-2Q9BYT5 123 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms