RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 RPS29P62273 56 aaKnown RBP4.44□□□□□ -1.7
SDCBP-206ENST00000519115 SPAG11AQ6PDA7 123 aa4.44□□□□□ -1.7
SDCBP-206ENST00000519115 TYMSOSQ8TAI1 123 aa4.44□□□□□ -1.7
SDCBP-206ENST00000519115 SS18L2Q9UHA2 77 aa4.44□□□□□ -1.7
SDCBP-206ENST00000519115 KRTAP19-4Q3LI73 84 aa4.43□□□□□ -1.7
SDCBP-206ENST00000519115 ASB16-AS1Q495Z4 193 aa4.43□□□□□ -1.7
SDCBP-206ENST00000519115 SIGMAR1Q99720 223 aa4.43□□□□□ -1.7
SDCBP-206ENST00000519115 LINC00846Q9NV44 126 aa4.43□□□□□ -1.7
SDCBP-206ENST00000519115 KRTAP9-7A8MTY7 169 aa4.42□□□□□ -1.7
SDCBP-206ENST00000519115 CXCL6P80162 114 aa4.42□□□□□ -1.7
SDCBP-206ENST00000519115 NREPQ16612 68 aa4.42□□□□□ -1.7
SDCBP-206ENST00000519115 VPS25Q9BRG1 176 aa4.42□□□□□ -1.7
SDCBP-206ENST00000519115 J3KT08 172 aa4.41□□□□□ -1.7
SDCBP-206ENST00000519115 SPINK1P00995 79 aa4.41□□□□□ -1.7
SDCBP-206ENST00000519115 KRTAP4-11Q9BYQ6 195 aa4.41□□□□□ -1.7
SDCBP-206ENST00000519115 IGLV9-49A0A0B4J1Y8 123 aa4.4□□□□□ -1.71
SDCBP-206ENST00000519115 MOBPQ13875 183 aa4.4□□□□□ -1.71
SDCBP-206ENST00000519115 LCE4AQ5TA78 99 aa4.4□□□□□ -1.71
SDCBP-206ENST00000519115 C9orf153Q5TBE3 101 aa4.4□□□□□ -1.71
SDCBP-206ENST00000519115 Q6ZVQ6 151 aa4.4□□□□□ -1.71
SDCBP-206ENST00000519115 FSIP2Q5CZC0 6907 aa4.39□□□□□ -1.71
SDCBP-206ENST00000519115 LINC00304Q8N9R0 145 aa4.39□□□□□ -1.71
SDCBP-206ENST00000519115 LIMD2Q9BT23 127 aa4.38□□□□□ -1.71
SDCBP-206ENST00000519115 LINC00472Q9H8W2 130 aa4.38□□□□□ -1.71
SDCBP-206ENST00000519115 A0A087WSZ3 146 aa4.37□□□□□ -1.71
SDCBP-206ENST00000519115 A0A1B0GV72 72 aa4.37□□□□□ -1.71
SDCBP-206ENST00000519115 SCGB1A1P11684 91 aa4.37□□□□□ -1.71
SDCBP-206ENST00000519115 PRR4Q16378 134 aa4.37□□□□□ -1.71
SDCBP-206ENST00000519115 HMCN2Q8NDA2 5059 aa4.36□□□□□ -1.71
SDCBP-206ENST00000519115 BPY2O14599 106 aa4.36□□□□□ -1.71
SDCBP-206ENST00000519115 RETNLBQ9BQ08 111 aa4.36□□□□□ -1.71
SDCBP-206ENST00000519115 MT-ATP8P03928 68 aa4.34□□□□□ -1.71
SDCBP-206ENST00000519115 CRCT1Q9UGL9 99 aa4.34□□□□□ -1.71
SDCBP-206ENST00000519115 NDUFB1O75438 58 aa4.33□□□□□ -1.72
SDCBP-206ENST00000519115 KRTAP23-1A1A580 65 aa4.32□□□□□ -1.72
SDCBP-206ENST00000519115 LRP2P98164 4655 aa4.32□□□□□ -1.72
SDCBP-206ENST00000519115 Q96NJ1 140 aa4.32□□□□□ -1.72
SDCBP-206ENST00000519115 A8MWP4 228 aa4.31□□□□□ -1.72
SDCBP-206ENST00000519115 PRR15Q8IV56 129 aa4.31□□□□□ -1.72
SDCBP-206ENST00000519115 A0A0G2JQZ4 141 aa4.3□□□□□ -1.72
SDCBP-206ENST00000519115 DSCR10P59022 87 aa4.3□□□□□ -1.72
SDCBP-206ENST00000519115 SMIM20Q8N5G0 67 aa4.3□□□□□ -1.72
SDCBP-206ENST00000519115 IGKV3D-7A0A0C4DH55 119 aa4.29□□□□□ -1.72
SDCBP-206ENST00000519115 HIST1H4AP62805 103 aaKnown RBP4.29□□□□□ -1.72
SDCBP-206ENST00000519115 C1orf195Q5TG92 126 aa4.29□□□□□ -1.72
SDCBP-206ENST00000519115 HRCT1Q6UXD1 115 aa4.29□□□□□ -1.72
SDCBP-206ENST00000519115 LPAP08519 4548 aa4.29□□□□□ -1.72
SDCBP-206ENST00000519115 IGLV7-46A0A075B6I9 117 aa4.28□□□□□ -1.72
SDCBP-206ENST00000519115 C8orf87E5RJ46 101 aa4.27□□□□□ -1.73
SDCBP-206ENST00000519115 IGKV4-1P06312 121 aa4.27□□□□□ -1.73
SDCBP-206ENST00000519115 LCE5AQ5TCM9 118 aa4.27□□□□□ -1.73
SDCBP-206ENST00000519115 A0A1B0GVX0 72 aa4.26□□□□□ -1.73
SDCBP-206ENST00000519115 FP248Q71RG6 208 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-206ENST00000519115 ATOX1O00244 68 aa4.25□□□□□ -1.73
SDCBP-206ENST00000519115 HCG22E2RYF7 251 aa4.24□□□□□ -1.73
SDCBP-206ENST00000519115 K7EQZ3 153 aa4.24□□□□□ -1.73
SDCBP-206ENST00000519115 TPRXLQ17RH7 258 aa4.24□□□□□ -1.73
SDCBP-206ENST00000519115 FAM236AA0A1B0GUQ0 79 aa4.22□□□□□ -1.73
SDCBP-206ENST00000519115 FAM236BA0A1B0GV22 79 aa4.22□□□□□ -1.73
SDCBP-206ENST00000519115 DEFB116Q30KQ4 102 aa4.22□□□□□ -1.73
SDCBP-206ENST00000519115 TMEM254Q8TBM7 123 aa4.22□□□□□ -1.73
SDCBP-206ENST00000519115 TP53AIP1Q9HCN2 124 aa4.22□□□□□ -1.73
SDCBP-206ENST00000519115 C8orf17Q9NRJ1 99 aa4.22□□□□□ -1.73
SDCBP-206ENST00000519115 hDV103S1A0JD37 113 aa4.21□□□□□ -1.74
SDCBP-206ENST00000519115 LINC00313P59037 77 aa4.21□□□□□ -1.74
SDCBP-206ENST00000519115 KRTAP13-3Q3SY46 172 aa4.21□□□□□ -1.74
SDCBP-206ENST00000519115 TRAV7A0A075B6U4 112 aa4.2□□□□□ -1.74
SDCBP-206ENST00000519115 A0A087WVE0 104 aa4.2□□□□□ -1.74
SDCBP-206ENST00000519115 CASC2Q6XLA1 102 aa4.2□□□□□ -1.74
SDCBP-206ENST00000519115 Q8N9L7 120 aa4.2□□□□□ -1.74
SDCBP-206ENST00000519115 IGHV6-1A0A0B4J1U7 121 aa4.19□□□□□ -1.74
SDCBP-206ENST00000519115 MMP24-AS1A0A0U1RRL7 71 aa4.19□□□□□ -1.74
SDCBP-206ENST00000519115 SERP2Q8N6R1 65 aa4.19□□□□□ -1.74
SDCBP-206ENST00000519115 Q8N9P0 234 aaPredicted RBP4.19□□□□□ -1.74
SDCBP-206ENST00000519115 UQCRQO14949 82 aa4.18□□□□□ -1.74
SDCBP-206ENST00000519115 C5orf47Q569G3 176 aa4.18□□□□□ -1.74
SDCBP-206ENST00000519115 MRPL34Q9BQ48 92 aaKnown RBP4.18□□□□□ -1.74
SDCBP-206ENST00000519115 OCR1Q9BZK8 76 aa4.18□□□□□ -1.74
SDCBP-206ENST00000519115 H3BPC8 53 aa4.17□□□□□ -1.74
SDCBP-206ENST00000519115 ANAPC13Q9BS18 74 aa4.17□□□□□ -1.74
SDCBP-206ENST00000519115 C9orf92A6NGG3 77 aa4.16□□□□□ -1.74
SDCBP-206ENST00000519115 COX7CP15954 63 aa4.16□□□□□ -1.74
SDCBP-206ENST00000519115 KRTAP9-3Q9BYQ3 159 aa4.15□□□□□ -1.75
SDCBP-206ENST00000519115 KRTAP16-1A8MUX0 517 aa4.14□□□□□ -1.75
SDCBP-206ENST00000519115 C20orf166-AS1Q96NR2 134 aa4.14□□□□□ -1.75
SDCBP-206ENST00000519115 A0A0A0MQY5 61 aa4.13□□□□□ -1.75
SDCBP-206ENST00000519115 NOTCH2NLQ7Z3S9 236 aa4.13□□□□□ -1.75
SDCBP-206ENST00000519115 WFDC13Q8IUB5 93 aa4.13□□□□□ -1.75
SDCBP-206ENST00000519115 A8MUU9 505 aa4.12□□□□□ -1.75
SDCBP-206ENST00000519115 NDUFC1O43677 76 aa4.11□□□□□ -1.75
SDCBP-206ENST00000519115 MP68P56378 58 aa4.11□□□□□ -1.75
SDCBP-206ENST00000519115 SEC61BP60468 96 aaKnown RBP4.11□□□□□ -1.75
SDCBP-206ENST00000519115 KLKP1Q107X0 134 aa4.11□□□□□ -1.75
SDCBP-206ENST00000519115 Q75L30 129 aa4.11□□□□□ -1.75
SDCBP-206ENST00000519115 TRAV22A0A0B4J277 110 aa4.1□□□□□ -1.75
SDCBP-206ENST00000519115 KRTAP4-1Q9BYQ7 146 aa4.09□□□□□ -1.75
SDCBP-206ENST00000519115 PCOTHQ58A44 107 aa4.08□□□□□ -1.76
SDCBP-206ENST00000519115 A0A0U1RQV1 116 aa4.07□□□□□ -1.76
SDCBP-206ENST00000519115 NDUFS5O43920 106 aa4.07□□□□□ -1.76
SDCBP-206ENST00000519115 MUC17Q685J3 4493 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms