RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 MT1HP80294 61 aa10.46□□□□□ -0.73
CTNNA1-213ENST00000519113 A0A0G2JQZ4 141 aa10.44□□□□□ -0.74
CTNNA1-213ENST00000519113 KRTAP19-2Q3LHN2 52 aa10.44□□□□□ -0.74
CTNNA1-213ENST00000519113 Q6ZVQ6 151 aa10.43□□□□□ -0.74
CTNNA1-213ENST00000519113 NREPQ16612 68 aa10.41□□□□□ -0.74
CTNNA1-213ENST00000519113 Q6Q795 121 aa10.41□□□□□ -0.74
CTNNA1-213ENST00000519113 ATP5EP2Q5VTU8 51 aa10.4□□□□□ -0.74
CTNNA1-213ENST00000519113 IGKV3D-7A0A0C4DH55 119 aa10.38□□□□□ -0.75
CTNNA1-213ENST00000519113 TRBV7-7A0A0K0K1E9 115 aa10.37□□□□□ -0.75
CTNNA1-213ENST00000519113 LORP23490 312 aaPredicted RBP10.37□□□□□ -0.75
CTNNA1-213ENST00000519113 PCOTHQ58A44 107 aa10.37□□□□□ -0.75
CTNNA1-213ENST00000519113 A0A087WSZ3 146 aa10.35□□□□□ -0.75
CTNNA1-213ENST00000519113 KRTAP10-6P60371 365 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-213ENST00000519113 IMUPQ9GZP8 106 aa10.35□□□□□ -0.75
CTNNA1-213ENST00000519113 CXCL6P80162 114 aa10.32□□□□□ -0.76
CTNNA1-213ENST00000519113 SCGB1A1P11684 91 aa10.31□□□□□ -0.76
CTNNA1-213ENST00000519113 HRCT1Q6UXD1 115 aa10.31□□□□□ -0.76
CTNNA1-213ENST00000519113 BPY2O14599 106 aa10.3□□□□□ -0.76
CTNNA1-213ENST00000519113 M0R2T5 61 aa10.28□□□□□ -0.76
CTNNA1-213ENST00000519113 CD164Q04900 197 aa10.28□□□□□ -0.76
CTNNA1-213ENST00000519113 HIST1H4AP62805 103 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-213ENST00000519113 LIMD2Q9BT23 127 aa10.27□□□□□ -0.77
CTNNA1-213ENST00000519113 C9orf92A6NGG3 77 aa10.26□□□□□ -0.77
CTNNA1-213ENST00000519113 SS18L2Q9UHA2 77 aa10.26□□□□□ -0.77
CTNNA1-213ENST00000519113 COX6B2Q6YFQ2 88 aa10.19□□□□□ -0.78
CTNNA1-213ENST00000519113 LINC00472Q9H8W2 130 aa10.19□□□□□ -0.78
CTNNA1-213ENST00000519113 A0A087WVE0 104 aa10.18□□□□□ -0.78
CTNNA1-213ENST00000519113 J3KT08 172 aa10.18□□□□□ -0.78
CTNNA1-213ENST00000519113 DEFB116Q30KQ4 102 aa10.18□□□□□ -0.78
CTNNA1-213ENST00000519113 FAM236AA0A1B0GUQ0 79 aa10.16□□□□□ -0.78
CTNNA1-213ENST00000519113 FAM236BA0A1B0GV22 79 aa10.16□□□□□ -0.78
CTNNA1-213ENST00000519113 DSCR10P59022 87 aa10.15□□□□□ -0.78
CTNNA1-213ENST00000519113 Q8N9L7 120 aa10.15□□□□□ -0.78
CTNNA1-213ENST00000519113 IGKV4-1P06312 121 aa10.14□□□□□ -0.79
CTNNA1-213ENST00000519113 FLGP20930 4061 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-213ENST00000519113 KRTAP9-7A8MTY7 169 aa10.12□□□□□ -0.79
CTNNA1-213ENST00000519113 Q5XG85 94 aa10.11□□□□□ -0.79
CTNNA1-213ENST00000519113 Q96NJ1 140 aa10.11□□□□□ -0.79
CTNNA1-213ENST00000519113 A8MWP4 228 aa10.1□□□□□ -0.79
CTNNA1-213ENST00000519113 K7EQZ3 153 aa10.1□□□□□ -0.79
CTNNA1-213ENST00000519113 NDUFB1O75438 58 aa10.09□□□□□ -0.79
CTNNA1-213ENST00000519113 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.08□□□□□ -0.8
CTNNA1-213ENST00000519113 RPL37P61927 97 aaKnown RBP10.08□□□□□ -0.8
CTNNA1-213ENST00000519113 PCP4P48539 62 aa10.07□□□□□ -0.8
CTNNA1-213ENST00000519113 ATOX1O00244 68 aa10.06□□□□□ -0.8
CTNNA1-213ENST00000519113 PRR15Q8IV56 129 aa10.06□□□□□ -0.8
CTNNA1-213ENST00000519113 ANAPC13Q9BS18 74 aa10.06□□□□□ -0.8
CTNNA1-213ENST00000519113 C1orf195Q5TG92 126 aa10.02□□□□□ -0.81
CTNNA1-213ENST00000519113 HCG22E2RYF7 251 aa10.01□□□□□ -0.81
CTNNA1-213ENST00000519113 A0A1B0GVX0 72 aa9.99□□□□□ -0.81
CTNNA1-213ENST00000519113 IGHV6-1A0A0B4J1U7 121 aa9.97□□□□□ -0.81
CTNNA1-213ENST00000519113 SMIM20Q8N5G0 67 aa9.97□□□□□ -0.81
CTNNA1-213ENST00000519113 WFDC13Q8IUB5 93 aa9.95□□□□□ -0.82
CTNNA1-213ENST00000519113 CASC2Q6XLA1 102 aa9.94□□□□□ -0.82
CTNNA1-213ENST00000519113 C8orf17Q9NRJ1 99 aa9.93□□□□□ -0.82
CTNNA1-213ENST00000519113 MMP24-AS1A0A0U1RRL7 71 aa9.92□□□□□ -0.82
CTNNA1-213ENST00000519113 SERP2Q8N6R1 65 aa9.92□□□□□ -0.82
CTNNA1-213ENST00000519113 TRAV7A0A075B6U4 112 aa9.9□□□□□ -0.82
CTNNA1-213ENST00000519113 hDV103S1A0JD37 113 aa9.9□□□□□ -0.82
CTNNA1-213ENST00000519113 C8orf87E5RJ46 101 aa9.9□□□□□ -0.82
CTNNA1-213ENST00000519113 COX7CP15954 63 aa9.87□□□□□ -0.83
CTNNA1-213ENST00000519113 SSPOA2VEC9 5147 aa9.86□□□□□ -0.83
CTNNA1-213ENST00000519113 ATP11AUNQ6ZP68 121 aa9.85□□□□□ -0.83
CTNNA1-213ENST00000519113 USH2AO75445 5202 aa9.85□□□□□ -0.83
CTNNA1-213ENST00000519113 UQCRQO14949 82 aa9.84□□□□□ -0.83
CTNNA1-213ENST00000519113 LINC00313P59037 77 aa9.84□□□□□ -0.83
CTNNA1-213ENST00000519113 NOTCH2NLQ7Z3S9 236 aa9.84□□□□□ -0.83
CTNNA1-213ENST00000519113 TMEM254Q8TBM7 123 aa9.84□□□□□ -0.83
CTNNA1-213ENST00000519113 OCR1Q9BZK8 76 aa9.84□□□□□ -0.83
CTNNA1-213ENST00000519113 KRTAP9-8Q9BYQ0 159 aa9.82□□□□□ -0.84
CTNNA1-213ENST00000519113 MRPL34Q9BQ48 92 aaKnown RBP9.81□□□□□ -0.84
CTNNA1-213ENST00000519113 CCDC179H3BU77 68 aa9.8□□□□□ -0.84
CTNNA1-213ENST00000519113 Q75L30 129 aa9.79□□□□□ -0.84
CTNNA1-213ENST00000519113 NDUFS5O43920 106 aa9.76□□□□□ -0.85
CTNNA1-213ENST00000519113 TP53AIP1Q9HCN2 124 aa9.76□□□□□ -0.85
CTNNA1-213ENST00000519113 FCGBPQ9Y6R7 5405 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-213ENST00000519113 C5orf47Q569G3 176 aa9.73□□□□□ -0.85
CTNNA1-213ENST00000519113 C20orf197Q8N268 126 aa9.71□□□□□ -0.86
CTNNA1-213ENST00000519113 KRTAP16-1A8MUX0 517 aa9.69□□□□□ -0.86
CTNNA1-213ENST00000519113 MP68P56378 58 aa9.68□□□□□ -0.86
CTNNA1-213ENST00000519113 Q8N9P0 234 aaPredicted RBP9.67□□□□□ -0.86
CTNNA1-213ENST00000519113 KRTAP19-1Q8IUB9 90 aa9.66□□□□□ -0.86
CTNNA1-213ENST00000519113 H0Y9P7 68 aa9.65□□□□□ -0.86
CTNNA1-213ENST00000519113 TRAV22A0A0B4J277 110 aa9.64□□□□□ -0.87
CTNNA1-213ENST00000519113 SNURFQ9Y675 71 aa9.64□□□□□ -0.87
CTNNA1-213ENST00000519113 KLKP1Q107X0 134 aa9.63□□□□□ -0.87
CTNNA1-213ENST00000519113 H3BPC8 53 aa9.62□□□□□ -0.87
CTNNA1-213ENST00000519113 MT2AP02795 61 aa9.62□□□□□ -0.87
CTNNA1-213ENST00000519113 LCE2BO14633 110 aa9.59□□□□□ -0.87
CTNNA1-213ENST00000519113 LINC00208Q96KT6 92 aa9.58□□□□□ -0.88
CTNNA1-213ENST00000519113 C20orf166-AS1Q96NR2 134 aa9.58□□□□□ -0.88
CTNNA1-213ENST00000519113 NDUFC1O43677 76 aa9.57□□□□□ -0.88
CTNNA1-213ENST00000519113 C1orf64Q8NEQ6 169 aa9.56□□□□□ -0.88
CTNNA1-213ENST00000519113 CYSTM1Q9H1C7 97 aa9.56□□□□□ -0.88
CTNNA1-213ENST00000519113 A8MUU9 505 aa9.55□□□□□ -0.88
CTNNA1-213ENST00000519113 MT1FP04733 61 aa9.54□□□□□ -0.88
CTNNA1-213ENST00000519113 Q5W150 140 aa9.54□□□□□ -0.88
CTNNA1-213ENST00000519113 ZCCHC13Q8WW36 166 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-213ENST00000519113 KRTAP9-3Q9BYQ3 159 aa9.53□□□□□ -0.88
CTNNA1-213ENST00000519113 KRTAP10-10P60014 251 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms