RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 TRAV1-2A0A0B4J238 106 aa1.84□□□□□ -2.11
HMGB1P23-201ENST00000518743 NDUFB6O95139 128 aa1.84□□□□□ -2.11
HMGB1P23-201ENST00000518743 ARMS2P0C7Q2 107 aa1.84□□□□□ -2.11
HMGB1P23-201ENST00000518743 C5orf38Q86SI9 138 aa1.84□□□□□ -2.11
HMGB1P23-201ENST00000518743 TOMM5Q8N4H5 51 aa1.84□□□□□ -2.11
HMGB1P23-201ENST00000518743 SMIM4Q8WVI0 70 aa1.84□□□□□ -2.11
HMGB1P23-201ENST00000518743 SPRR4Q96PI1 79 aa1.84□□□□□ -2.11
HMGB1P23-201ENST00000518743 C6orf48Q9UBA6 75 aa1.84□□□□□ -2.11
HMGB1P23-201ENST00000518743 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.83□□□□□ -2.12
HMGB1P23-201ENST00000518743 LOC110117498A0A087WWA1 95 aa1.83□□□□□ -2.12
HMGB1P23-201ENST00000518743 INE1O15225 51 aa1.83□□□□□ -2.12
HMGB1P23-201ENST00000518743 SIX6O95475 246 aa1.83□□□□□ -2.12
HMGB1P23-201ENST00000518743 TRACP01848 142 aa1.83□□□□□ -2.12
HMGB1P23-201ENST00000518743 COX7CP15954 63 aa1.83□□□□□ -2.12
HMGB1P23-201ENST00000518743 RBM3P98179 157 aaKnown RBP1.83□□□□□ -2.12
HMGB1P23-201ENST00000518743 SSBP1Q04837 148 aaKnown RBP1.83□□□□□ -2.12
HMGB1P23-201ENST00000518743 COL5A1-AS1Q5SY13 56 aa1.83□□□□□ -2.12
HMGB1P23-201ENST00000518743 LIMD2Q9BT23 127 aa1.83□□□□□ -2.12
HMGB1P23-201ENST00000518743 HSPB8Q9UJY1 196 aa1.83□□□□□ -2.12
HMGB1P23-201ENST00000518743 MGPP08493 103 aa1.82□□□□□ -2.12
HMGB1P23-201ENST00000518743 C9orf153Q5TBE3 101 aa1.82□□□□□ -2.12
HMGB1P23-201ENST00000518743 MIC13Q5XKP0 118 aa1.82□□□□□ -2.12
HMGB1P23-201ENST00000518743 Q86TA4 180 aa1.82□□□□□ -2.12
HMGB1P23-201ENST00000518743 PRO1933Q9H354 126 aa1.82□□□□□ -2.12
HMGB1P23-201ENST00000518743 KANTRA0A1W2PQU2 76 aa1.81□□□□□ -2.12
HMGB1P23-201ENST00000518743 F8W1H4 67 aa1.81□□□□□ -2.12
HMGB1P23-201ENST00000518743 H3BRM9 83 aa1.81□□□□□ -2.12
HMGB1P23-201ENST00000518743 K7ERU9 68 aa1.81□□□□□ -2.12
HMGB1P23-201ENST00000518743 UQCRQO14949 82 aa1.81□□□□□ -2.12
HMGB1P23-201ENST00000518743 MT1BP07438 61 aa1.81□□□□□ -2.12
HMGB1P23-201ENST00000518743 OCIAD2Q56VL3 154 aa1.81□□□□□ -2.12
HMGB1P23-201ENST00000518743 MGST2Q99735 147 aa1.81□□□□□ -2.12
HMGB1P23-201ENST00000518743 GSKIPQ9P0R6 139 aa1.81□□□□□ -2.12
HMGB1P23-201ENST00000518743 UBE2L3P68036 154 aaKnown RBP1.8□□□□□ -2.12
HMGB1P23-201ENST00000518743 TMEM14EPQ6UXP3 125 aa1.8□□□□□ -2.12
HMGB1P23-201ENST00000518743 SSBP3-AS1Q7Z2R9 100 aa1.8□□□□□ -2.12
HMGB1P23-201ENST00000518743 BRK1Q8WUW1 75 aa1.8□□□□□ -2.12
HMGB1P23-201ENST00000518743 S100A16Q96FQ6 103 aaKnown RBP1.8□□□□□ -2.12
HMGB1P23-201ENST00000518743 AP1S3Q96PC3 154 aa1.8□□□□□ -2.12
HMGB1P23-201ENST00000518743 CDC42SE1Q9NRR8 79 aa1.8□□□□□ -2.12
HMGB1P23-201ENST00000518743 PSENENQ9NZ42 101 aa1.8□□□□□ -2.12
HMGB1P23-201ENST00000518743 TRBV30A0A0K0K1B3 111 aa1.79□□□□□ -2.12
HMGB1P23-201ENST00000518743 ZNF727A8MUV8 499 aa1.79□□□□□ -2.12
HMGB1P23-201ENST00000518743 C9JAW5 83 aa1.79□□□□□ -2.12
HMGB1P23-201ENST00000518743 FAUP35544 74 aaKnown RBP1.79□□□□□ -2.12
HMGB1P23-201ENST00000518743 PPP1R1CQ8WVI7 109 aa1.79□□□□□ -2.12
HMGB1P23-201ENST00000518743 HBDP02042 147 aa1.78□□□□□ -2.12
HMGB1P23-201ENST00000518743 AKAIN1P0CW23 69 aa1.78□□□□□ -2.12
HMGB1P23-201ENST00000518743 IGLC3P0DOY3 106 aa1.78□□□□□ -2.12
HMGB1P23-201ENST00000518743 FOXA3P55318 350 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P23-201ENST00000518743 SPANXN1Q5VSR9 72 aa1.78□□□□□ -2.12
HMGB1P23-201ENST00000518743 VPS25Q9BRG1 176 aa1.78□□□□□ -2.12
HMGB1P23-201ENST00000518743 UQCR10Q9UDW1 63 aa1.78□□□□□ -2.12
HMGB1P23-201ENST00000518743 ARL2-SNX15V9GYD0 113 aa1.78□□□□□ -2.12
HMGB1P23-201ENST00000518743 UMAD1C9J7I0 102 aa1.77□□□□□ -2.13
HMGB1P23-201ENST00000518743 SSSCA1O60232 199 aa1.77□□□□□ -2.13
HMGB1P23-201ENST00000518743 CASC2Q6XLA1 102 aa1.77□□□□□ -2.13
HMGB1P23-201ENST00000518743 CLEC2BQ92478 149 aa1.77□□□□□ -2.13
HMGB1P23-201ENST00000518743 LOC107984156A0A0G2JMH3 177 aa1.76□□□□□ -2.13
HMGB1P23-201ENST00000518743 M0QY20 66 aa1.76□□□□□ -2.13
HMGB1P23-201ENST00000518743 SFT2D2O95562 160 aa1.76□□□□□ -2.13
HMGB1P23-201ENST00000518743 CD3DP04234 171 aa1.76□□□□□ -2.13
HMGB1P23-201ENST00000518743 KRTAP12-4P60329 112 aa1.76□□□□□ -2.13
HMGB1P23-201ENST00000518743 CKS1BP61024 79 aa1.76□□□□□ -2.13
HMGB1P23-201ENST00000518743 RPL7L1Q6DKI1 246 aaKnown RBP1.76□□□□□ -2.13
HMGB1P23-201ENST00000518743 ARL17AQ8IVW1 177 aa1.76□□□□□ -2.13
HMGB1P23-201ENST00000518743 FAM167A-AS1Q96KT0 104 aa1.76□□□□□ -2.13
HMGB1P23-201ENST00000518743 UBE2L5PA0A1B0GUS4 154 aa1.75□□□□□ -2.13
HMGB1P23-201ENST00000518743 PMCHL1Q16048 86 aa1.75□□□□□ -2.13
HMGB1P23-201ENST00000518743 J3QR89 54 aa1.74□□□□□ -2.13
HMGB1P23-201ENST00000518743 HSD52Q0P140 79 aa1.74□□□□□ -2.13
HMGB1P23-201ENST00000518743 MIR22HGQ0VDD5 57 aa1.74□□□□□ -2.13
HMGB1P23-201ENST00000518743 Q5XG85 94 aa1.74□□□□□ -2.13
HMGB1P23-201ENST00000518743 MRPL54Q6P161 138 aaKnown RBP1.74□□□□□ -2.13
HMGB1P23-201ENST00000518743 C5orf17Q8NAS9 161 aa1.74□□□□□ -2.13
HMGB1P23-201ENST00000518743 C18orf32Q8TCD1 76 aa1.74□□□□□ -2.13
HMGB1P23-201ENST00000518743 OBSCN-AS1Q96MR7 158 aa1.74□□□□□ -2.13
HMGB1P23-201ENST00000518743 PSMG3Q9BT73 122 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P23-201ENST00000518743 CDC42SE2Q9NRR3 84 aa1.74□□□□□ -2.13
HMGB1P23-201ENST00000518743 PIGBOS1A0A0B4J2F0 54 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 NCR2O95944 276 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 SLC25A6P12236 298 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 CKS2P33552 79 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 SEC11AP67812 179 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 SERF2P84101 59 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 BVES-AS1Q5T3Y7 98 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 GTF2H5Q6ZYL4 71 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 SMIM7Q9BQ49 75 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 PMCHL2Q9BQD1 86 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 VAMP8Q9BV40 100 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 ST20Q9HBF5 79 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 MANBALQ9NQG1 85 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 ERG28Q9UKR5 140 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 FAM236AA0A1B0GUQ0 79 aa1.72□□□□□ -2.13
HMGB1P23-201ENST00000518743 FAM236BA0A1B0GV22 79 aa1.72□□□□□ -2.13
HMGB1P23-201ENST00000518743 DNAL4O96015 105 aa1.72□□□□□ -2.13
HMGB1P23-201ENST00000518743 GNG4P50150 75 aa1.72□□□□□ -2.13
HMGB1P23-201ENST00000518743 SPATA45Q537H7 98 aa1.72□□□□□ -2.13
HMGB1P23-201ENST00000518743 SPANXDQ9BXN6 97 aa1.72□□□□□ -2.13
HMGB1P23-201ENST00000518743 K7EP34 96 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms