RNA–Protein interactions for RNA: ENST00000518426.1

CLVS1-202, Transcript of clavesin 1, humanhuman

TSL 4

Gene CLVS1, Length 312 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-202ENST00000518426 GCN1Q92616 2671 aaKnown RBP-0.39□□□□□ -2.47
CLVS1-202ENST00000518426 CEP290O15078 2479 aa-0.39□□□□□ -2.47
CLVS1-202ENST00000518426 INO80Q9ULG1 1556 aaPredicted RBP-0.39□□□□□ -2.47
CLVS1-202ENST00000518426 USH2AO75445 5202 aa-0.4□□□□□ -2.47
CLVS1-202ENST00000518426 LAMA2P24043 3122 aaKnown RBP-0.4□□□□□ -2.47
CLVS1-202ENST00000518426 NIPBLQ6KC79 2804 aaeCLIP-0.4□□□□□ -2.47
CLVS1-202ENST00000518426 DEFB106AQ8N104 65 aa-0.4□□□□□ -2.47
CLVS1-202ENST00000518426 ACACAQ13085 2346 aa-0.4□□□□□ -2.47
CLVS1-202ENST00000518426 STARD9Q9P2P6 4700 aa-0.4□□□□□ -2.47
CLVS1-202ENST00000518426 RIF1Q5UIP0 2472 aaKnown RBP-0.41□□□□□ -2.47
CLVS1-202ENST00000518426 ITSN2Q9NZM3 1697 aa-0.41□□□□□ -2.48
CLVS1-202ENST00000518426 PKD1L2Q7Z442 2459 aa-0.41□□□□□ -2.48
CLVS1-202ENST00000518426 MGAM2Q2M2H8 2515 aa-0.41□□□□□ -2.48
CLVS1-202ENST00000518426 ANKRD11Q6UB99 2663 aaPredicted RBP-0.41□□□□□ -2.48
CLVS1-202ENST00000518426 MUC17Q685J3 4493 aa-0.42□□□□□ -2.48
CLVS1-202ENST00000518426 ASXL1Q8IXJ9 1541 aa-0.42□□□□□ -2.48
CLVS1-202ENST00000518426 FAT3Q8TDW7 4589 aa-0.42□□□□□ -2.48
CLVS1-202ENST00000518426 TEX15Q9BXT5 2789 aa-0.42□□□□□ -2.48
CLVS1-202ENST00000518426 RYR3Q15413 4870 aa-0.42□□□□□ -2.48
CLVS1-202ENST00000518426 DNAH9Q9NYC9 4486 aa-0.42□□□□□ -2.48
CLVS1-202ENST00000518426 MT1AP04731 61 aa-0.42□□□□□ -2.48
CLVS1-202ENST00000518426 S4R3F8 94 aa-0.42□□□□□ -2.48
CLVS1-202ENST00000518426 HYDINQ4G0P3 5121 aa-0.42□□□□□ -2.48
CLVS1-202ENST00000518426 KIAA1109Q2LD37 5005 aa-0.42□□□□□ -2.48
CLVS1-202ENST00000518426 C3P01024 1663 aa-0.43□□□□□ -2.48
CLVS1-202ENST00000518426 LAMA1P25391 3075 aa-0.43□□□□□ -2.48
CLVS1-202ENST00000518426 LAMA3Q16787 3333 aa-0.43□□□□□ -2.48
CLVS1-202ENST00000518426 MTORP42345 2549 aa-0.43□□□□□ -2.48
CLVS1-202ENST00000518426 UBR4Q5T4S7 5183 aa-0.44□□□□□ -2.48
CLVS1-202ENST00000518426 DNAH6Q9C0G6 4158 aa-0.44□□□□□ -2.48
CLVS1-202ENST00000518426 LRRK2Q5S007 2527 aa-0.44□□□□□ -2.48
CLVS1-202ENST00000518426 MINOS1Q5TGZ0 78 aa-0.44□□□□□ -2.48
CLVS1-202ENST00000518426 FAM186AA6NE01 2351 aa-0.44□□□□□ -2.48
CLVS1-202ENST00000518426 KIF1AQ12756 1690 aa-0.44□□□□□ -2.48
CLVS1-202ENST00000518426 CCDC168Q8NDH2 2452 aa-0.44□□□□□ -2.48
CLVS1-202ENST00000518426 PKHD1L1Q86WI1 4243 aa-0.44□□□□□ -2.48
CLVS1-202ENST00000518426 RYR1P21817 5038 aa-0.44□□□□□ -2.48
CLVS1-202ENST00000518426 EPPK1P58107 5090 aaKnown RBP-0.45□□□□□ -2.48
CLVS1-202ENST00000518426 WDR87Q6ZQQ6 2873 aa-0.45□□□□□ -2.48
CLVS1-202ENST00000518426 NBEAQ8NFP9 2946 aa-0.45□□□□□ -2.48
CLVS1-202ENST00000518426 VPS13DQ5THJ4 4388 aa-0.46□□□□□ -2.48
CLVS1-202ENST00000518426 MT1HP80294 61 aa-0.46□□□□□ -2.48
CLVS1-202ENST00000518426 UTP20O75691 2785 aaKnown RBP-0.46□□□□□ -2.48
CLVS1-202ENST00000518426 ABCC6O95255 1503 aa-0.47□□□□□ -2.48
CLVS1-202ENST00000518426 WT1-ASQ06250 92 aa-0.47□□□□□ -2.48
CLVS1-202ENST00000518426 DEFB114Q30KQ6 69 aa-0.47□□□□□ -2.48
CLVS1-202ENST00000518426 MROH1Q8NDA8 1641 aa-0.47□□□□□ -2.48
CLVS1-202ENST00000518426 BIRC6Q9NR09 4857 aa-0.47□□□□□ -2.48
CLVS1-202ENST00000518426 TOGARAM1Q9Y4F4 1720 aa-0.47□□□□□ -2.49
CLVS1-202ENST00000518426 DNMBPQ6XZF7 1577 aa-0.48□□□□□ -2.49
CLVS1-202ENST00000518426 RPS27P42677 84 aaKnown RBP-0.48□□□□□ -2.49
CLVS1-202ENST00000518426 RPS27LQ71UM5 84 aaKnown RBP-0.48□□□□□ -2.49
CLVS1-202ENST00000518426 RELNP78509 3460 aa-0.48□□□□□ -2.49
CLVS1-202ENST00000518426 CEP295Q9C0D2 2601 aa-0.48□□□□□ -2.49
CLVS1-202ENST00000518426 DNAH3Q8TD57 4116 aa-0.49□□□□□ -2.49
CLVS1-202ENST00000518426 DNAH2Q9P225 4427 aa-0.49□□□□□ -2.49
CLVS1-202ENST00000518426 ACACBO00763 2458 aa-0.49□□□□□ -2.49
CLVS1-202ENST00000518426 DEFB1P60022 68 aa-0.49□□□□□ -2.49
CLVS1-202ENST00000518426 ITPR1Q14643 2758 aa-0.49□□□□□ -2.49
CLVS1-202ENST00000518426 NBEAL2Q6ZNJ1 2754 aa-0.49□□□□□ -2.49
CLVS1-202ENST00000518426 ANK3Q12955 4377 aaKnown RBP-0.5□□□□□ -2.49
CLVS1-202ENST00000518426 DNAH11Q96DT5 4516 aa-0.5□□□□□ -2.49
CLVS1-202ENST00000518426 FRYQ5TBA9 3013 aa-0.5□□□□□ -2.49
CLVS1-202ENST00000518426 A0A0C4DFX4 3053 aa-0.5□□□□□ -2.49
CLVS1-202ENST00000518426 MADDQ8WXG6 1647 aa-0.5□□□□□ -2.49
CLVS1-202ENST00000518426 RYR2Q92736 4967 aa-0.5□□□□□ -2.49
CLVS1-202ENST00000518426 MYO9AB2RTY4 2548 aa-0.5□□□□□ -2.49
CLVS1-202ENST00000518426 TLN2Q9Y4G6 2542 aa-0.5□□□□□ -2.49
CLVS1-202ENST00000518426 CELSR3Q9NYQ7 3312 aa-0.51□□□□□ -2.49
CLVS1-202ENST00000518426 PLECQ15149 4684 aaKnown RBP-0.51□□□□□ -2.49
CLVS1-202ENST00000518426 LINC01549A6NIU2 74 aa-0.51□□□□□ -2.49
CLVS1-202ENST00000518426 DEFB110Q30KQ9 67 aa-0.51□□□□□ -2.49
CLVS1-202ENST00000518426 C6orf48Q9UBA6 75 aa-0.51□□□□□ -2.49
CLVS1-202ENST00000518426 SACSQ9NZJ4 4579 aa-0.51□□□□□ -2.49
CLVS1-202ENST00000518426 CFAP46Q8IYW2 2715 aa-0.52□□□□□ -2.49
CLVS1-202ENST00000518426 COL6A5A8TX70 2615 aa-0.52□□□□□ -2.49
CLVS1-202ENST00000518426 MT1HL1P0DM35 61 aa-0.52□□□□□ -2.49
CLVS1-202ENST00000518426 FCER1GP30273 86 aa-0.52□□□□□ -2.49
CLVS1-202ENST00000518426 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.52□□□□□ -2.49
CLVS1-202ENST00000518426 C5orf42Q9H799 3197 aa-0.52□□□□□ -2.49
CLVS1-202ENST00000518426 COL12A1Q99715 3063 aa-0.52□□□□□ -2.49
CLVS1-202ENST00000518426 APOBP04114 4563 aaKnown RBP-0.53□□□□□ -2.49
CLVS1-202ENST00000518426 MT1XP80297 61 aa-0.53□□□□□ -2.49
CLVS1-202ENST00000518426 SPTAN1Q13813 2472 aaKnown RBP-0.54□□□□□ -2.5
CLVS1-202ENST00000518426 RANBP2P49792 3224 aaKnown RBP-0.54□□□□□ -2.5
CLVS1-202ENST00000518426 TRIOO75962 3097 aa-0.54□□□□□ -2.5
CLVS1-202ENST00000518426 SFTA3P0C7M3 94 aa-0.54□□□□□ -2.5
CLVS1-202ENST00000518426 NCBP2-AS2Q69YL0 99 aa-0.54□□□□□ -2.5
CLVS1-202ENST00000518426 CHD7Q9P2D1 2997 aa-0.54□□□□□ -2.5
CLVS1-202ENST00000518426 LRBAP50851 2863 aa-0.55□□□□□ -2.5
CLVS1-202ENST00000518426 KRTAP19-5Q3LI72 72 aa-0.55□□□□□ -2.5
CLVS1-202ENST00000518426 TLN1Q9Y490 2541 aaKnown RBP-0.55□□□□□ -2.5
CLVS1-202ENST00000518426 EFCAB5A4FU69 1503 aa-0.55□□□□□ -2.5
CLVS1-202ENST00000518426 RNF213Q63HN8 5207 aa-0.56□□□□□ -2.5
CLVS1-202ENST00000518426 DNHD1Q96M86 4753 aa-0.56□□□□□ -2.5
CLVS1-202ENST00000518426 CLPSL2Q6UWE3 100 aa-0.56□□□□□ -2.5
CLVS1-202ENST00000518426 SRCAPQ6ZRS2 3230 aa-0.56□□□□□ -2.5
CLVS1-202ENST00000518426 LY75O60449 1722 aa-0.56□□□□□ -2.5
CLVS1-202ENST00000518426 CDC42BPAQ5VT25 1732 aa-0.56□□□□□ -2.5
CLVS1-202ENST00000518426 EYSQ5T1H1 3165 aa-0.57□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms