RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 CCDC179H3BU77 68 aa3.51□□□□□ -1.85
CD47-205ENST00000517766 SS18L2Q9UHA2 77 aa3.51□□□□□ -1.85
CD47-205ENST00000517766 TRAV7A0A075B6U4 112 aa3.5□□□□□ -1.85
CD47-205ENST00000517766 A0A0G2JQZ4 141 aa3.5□□□□□ -1.85
CD47-205ENST00000517766 J3KT08 172 aa3.5□□□□□ -1.85
CD47-205ENST00000517766 DSCR10P59022 87 aa3.49□□□□□ -1.85
CD47-205ENST00000517766 MOBPQ13875 183 aa3.49□□□□□ -1.85
CD47-205ENST00000517766 SSBP3-AS1Q7Z2R9 100 aa3.49□□□□□ -1.85
CD47-205ENST00000517766 TGP01266 2768 aa3.49□□□□□ -1.85
CD47-205ENST00000517766 A0A087X002 238 aa3.48□□□□□ -1.85
CD47-205ENST00000517766 CD164Q04900 197 aa3.48□□□□□ -1.85
CD47-205ENST00000517766 FAM229BQ4G0N7 80 aa3.48□□□□□ -1.85
CD47-205ENST00000517766 NOTCH2NLQ7Z3S9 236 aa3.48□□□□□ -1.85
CD47-205ENST00000517766 Q8N9L7 120 aa3.48□□□□□ -1.85
CD47-205ENST00000517766 LINC00472Q9H8W2 130 aa3.48□□□□□ -1.85
CD47-205ENST00000517766 DNAH8Q96JB1 4490 aa3.48□□□□□ -1.85
CD47-205ENST00000517766 A8MWP4 228 aa3.47□□□□□ -1.85
CD47-205ENST00000517766 K7EQZ3 153 aa3.47□□□□□ -1.85
CD47-205ENST00000517766 NDUFB1O75438 58 aa3.47□□□□□ -1.85
CD47-205ENST00000517766 HECTD4Q9Y4D8 3996 aa3.47□□□□□ -1.85
CD47-205ENST00000517766 FRAS1Q86XX4 4008 aa3.46□□□□□ -1.86
CD47-205ENST00000517766 A0A1B0GVY2 172 aa3.46□□□□□ -1.86
CD47-205ENST00000517766 HCG22E2RYF7 251 aa3.46□□□□□ -1.86
CD47-205ENST00000517766 DNAH11Q96DT5 4516 aa3.45□□□□□ -1.86
CD47-205ENST00000517766 DNAH5Q8TE73 4624 aa3.45□□□□□ -1.86
CD47-205ENST00000517766 DEFB116Q30KQ4 102 aa3.45□□□□□ -1.86
CD47-205ENST00000517766 HRCT1Q6UXD1 115 aa3.45□□□□□ -1.86
CD47-205ENST00000517766 PRR15Q8IV56 129 aa3.45□□□□□ -1.86
CD47-205ENST00000517766 ANAPC11Q9NYG5 84 aa3.45□□□□□ -1.86
CD47-205ENST00000517766 ASB16-AS1Q495Z4 193 aa3.44□□□□□ -1.86
CD47-205ENST00000517766 SPINK6Q6UWN8 80 aa3.44□□□□□ -1.86
CD47-205ENST00000517766 OCR1Q9BZK8 76 aa3.44□□□□□ -1.86
CD47-205ENST00000517766 NDUFC1O43677 76 aa3.43□□□□□ -1.86
CD47-205ENST00000517766 KLKP1Q107X0 134 aa3.43□□□□□ -1.86
CD47-205ENST00000517766 C20orf197Q8N268 126 aa3.43□□□□□ -1.86
CD47-205ENST00000517766 Q96NJ1 140 aa3.43□□□□□ -1.86
CD47-205ENST00000517766 PKD1P98161 4303 aa3.43□□□□□ -1.86
CD47-205ENST00000517766 TMEM258P61165 79 aa3.42□□□□□ -1.86
CD47-205ENST00000517766 C5orf47Q569G3 176 aa3.42□□□□□ -1.86
CD47-205ENST00000517766 Q5XG85 94 aa3.42□□□□□ -1.86
CD47-205ENST00000517766 CASC2Q6XLA1 102 aa3.42□□□□□ -1.86
CD47-205ENST00000517766 WFDC13Q8IUB5 93 aa3.42□□□□□ -1.86
CD47-205ENST00000517766 SACSQ9NZJ4 4579 aa3.42□□□□□ -1.86
CD47-205ENST00000517766 FAT2Q9NYQ8 4349 aa3.42□□□□□ -1.86
CD47-205ENST00000517766 HYDINQ4G0P3 5121 aa3.42□□□□□ -1.86
CD47-205ENST00000517766 KRTAP1-4P0C5Y4 121 aa3.41□□□□□ -1.86
CD47-205ENST00000517766 KRTAP13-2Q52LG2 175 aa3.41□□□□□ -1.86
CD47-205ENST00000517766 TMEM254Q8TBM7 123 aa3.41□□□□□ -1.86
CD47-205ENST00000517766 LIMD2Q9BT23 127 aa3.41□□□□□ -1.86
CD47-205ENST00000517766 MMP24-AS1A0A0U1RRL7 71 aa3.4□□□□□ -1.87
CD47-205ENST00000517766 A0A1B0GVX0 72 aa3.4□□□□□ -1.87
CD47-205ENST00000517766 hDV103S1A0JD37 113 aa3.4□□□□□ -1.87
CD47-205ENST00000517766 TYMSOSQ8TAI1 123 aa3.4□□□□□ -1.87
CD47-205ENST00000517766 C8orf17Q9NRJ1 99 aa3.4□□□□□ -1.87
CD47-205ENST00000517766 A0A0U1RQV1 116 aa3.39□□□□□ -1.87
CD47-205ENST00000517766 C8orf87E5RJ46 101 aa3.39□□□□□ -1.87
CD47-205ENST00000517766 H3BPC8 53 aa3.39□□□□□ -1.87
CD47-205ENST00000517766 TP53AIP1Q9HCN2 124 aa3.39□□□□□ -1.87
CD47-205ENST00000517766 IGHV6-1A0A0B4J1U7 121 aa3.38□□□□□ -1.87
CD47-205ENST00000517766 SPINK1P00995 79 aa3.38□□□□□ -1.87
CD47-205ENST00000517766 MP68P56378 58 aa3.38□□□□□ -1.87
CD47-205ENST00000517766 RPS29P62273 56 aaKnown RBP3.38□□□□□ -1.87
CD47-205ENST00000517766 SPAG11AQ6PDA7 123 aa3.38□□□□□ -1.87
CD47-205ENST00000517766 CYSTM1Q9H1C7 97 aa3.38□□□□□ -1.87
CD47-205ENST00000517766 SNURFQ9Y675 71 aa3.38□□□□□ -1.87
CD47-205ENST00000517766 IGLV7-46A0A075B6I9 117 aa3.37□□□□□ -1.87
CD47-205ENST00000517766 H7BZZ5 65 aa3.37□□□□□ -1.87
CD47-205ENST00000517766 SMR3BP02814 79 aaPredicted RBP3.37□□□□□ -1.87
CD47-205ENST00000517766 ATP5EP56381 51 aaPredicted RBP3.37□□□□□ -1.87
CD47-205ENST00000517766 MRPL34Q9BQ48 92 aaKnown RBP3.37□□□□□ -1.87
CD47-205ENST00000517766 SRRM2Q9UQ35 2752 aaKnown RBP3.36□□□□□ -1.87
CD47-205ENST00000517766 FAM236DA0A1B0GTK5 79 aa3.36□□□□□ -1.87
CD47-205ENST00000517766 FAM236CP0DP71 79 aa3.36□□□□□ -1.87
CD47-205ENST00000517766 H0Y9P7 68 aa3.35□□□□□ -1.87
CD47-205ENST00000517766 KRTAP10-4P60372 401 aaPredicted RBP3.35□□□□□ -1.87
CD47-205ENST00000517766 RPS28P62857 69 aaKnown RBP3.35□□□□□ -1.87
CD47-205ENST00000517766 C1orf195Q5TG92 126 aa3.35□□□□□ -1.87
CD47-205ENST00000517766 LINC00304Q8N9R0 145 aa3.35□□□□□ -1.87
CD47-205ENST00000517766 ZCCHC13Q8WW36 166 aaKnown RBP3.35□□□□□ -1.87
CD47-205ENST00000517766 LRP1BQ9NZR2 4599 aa3.35□□□□□ -1.87
CD47-205ENST00000517766 TRAV22A0A0B4J277 110 aa3.34□□□□□ -1.87
CD47-205ENST00000517766 LINC00313P59037 77 aa3.34□□□□□ -1.87
CD47-205ENST00000517766 NDUFS5O43920 106 aa3.33□□□□□ -1.88
CD47-205ENST00000517766 LINC00208Q96KT6 92 aa3.33□□□□□ -1.88
CD47-205ENST00000517766 DYNC1H1Q14204 4646 aaKnown RBP3.32□□□□□ -1.88
CD47-205ENST00000517766 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
CD47-205ENST00000517766 C1orf64Q8NEQ6 169 aa3.31□□□□□ -1.88
CD47-205ENST00000517766 SERP1Q9Y6X1 66 aa3.31□□□□□ -1.88
CD47-205ENST00000517766 RYR2Q92736 4967 aa3.29□□□□□ -1.88
CD47-205ENST00000517766 APOBP04114 4563 aaKnown RBP3.29□□□□□ -1.88
CD47-205ENST00000517766 VPS13BQ7Z7G8 4022 aa3.29□□□□□ -1.88
CD47-205ENST00000517766 NDUFAF8A1L188 74 aa3.29□□□□□ -1.88
CD47-205ENST00000517766 Q5VSD8 79 aa3.29□□□□□ -1.88
CD47-205ENST00000517766 SPANXA2-OT1Q8N9U9 137 aa3.29□□□□□ -1.88
CD47-205ENST00000517766 CYP4F30PQ9H0H9 118 aa3.29□□□□□ -1.88
CD47-205ENST00000517766 LOC101927531A0A1B0GV80 90 aa3.28□□□□□ -1.88
CD47-205ENST00000517766 KRTAP16-1A8MUX0 517 aa3.28□□□□□ -1.88
CD47-205ENST00000517766 PKHD1P08F94 4074 aa3.26□□□□□ -1.89
CD47-205ENST00000517766 SMIM26A0A096LP01 95 aa3.25□□□□□ -1.89
CD47-205ENST00000517766 KRTAP10-8P60410 259 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms