RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 FAM240AA0A1B0GVK7 77 aa5.98□□□□□ -1.45
TRAPPC9-203ENST00000517667 NDUFV3P56181 108 aaKnown RBP5.98□□□□□ -1.45
TRAPPC9-203ENST00000517667 FCGBPQ9Y6R7 5405 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC9-203ENST00000517667 IGLV5-48A0A075B6I7 105 aa5.97□□□□□ -1.45
TRAPPC9-203ENST00000517667 SMIM29Q86T20 159 aa5.97□□□□□ -1.45
TRAPPC9-203ENST00000517667 DEFB105AQ8NG35 78 aa5.97□□□□□ -1.45
TRAPPC9-203ENST00000517667 OBSCN-AS1Q96MR7 158 aa5.97□□□□□ -1.45
TRAPPC9-203ENST00000517667 VPS25Q9BRG1 176 aa5.96□□□□□ -1.46
TRAPPC9-203ENST00000517667 KRTAP9-8Q9BYQ0 159 aa5.96□□□□□ -1.46
TRAPPC9-203ENST00000517667 C14orf132Q9NPU4 83 aa5.95□□□□□ -1.46
TRAPPC9-203ENST00000517667 LOC110117498A0A087WWA1 95 aa5.94□□□□□ -1.46
TRAPPC9-203ENST00000517667 ATP11AUNQ6ZP68 121 aa5.94□□□□□ -1.46
TRAPPC9-203ENST00000517667 A0A1B0GW54 56 aa5.93□□□□□ -1.46
TRAPPC9-203ENST00000517667 MACF1Q9UPN3 7388 aaKnown RBP5.92□□□□□ -1.46
TRAPPC9-203ENST00000517667 CCKP06307 115 aa5.92□□□□□ -1.46
TRAPPC9-203ENST00000517667 KRTAP19-1Q8IUB9 90 aa5.92□□□□□ -1.46
TRAPPC9-203ENST00000517667 SYNE2Q8WXH0 6885 aaKnown RBP5.92□□□□□ -1.46
TRAPPC9-203ENST00000517667 Q6JHZ5 121 aa5.91□□□□□ -1.46
TRAPPC9-203ENST00000517667 TRBV7-4A0A0J9YYF1 115 aa5.9□□□□□ -1.46
TRAPPC9-203ENST00000517667 A0A1B0GV72 72 aa5.9□□□□□ -1.46
TRAPPC9-203ENST00000517667 Q75L30 129 aa5.9□□□□□ -1.46
TRAPPC9-203ENST00000517667 UBL5Q9BZL1 73 aa5.9□□□□□ -1.46
TRAPPC9-203ENST00000517667 Q6ZQT0 140 aa5.89□□□□□ -1.47
TRAPPC9-203ENST00000517667 A0A0G2JQZ4 141 aa5.86□□□□□ -1.47
TRAPPC9-203ENST00000517667 ATP5EP2Q5VTU8 51 aa5.86□□□□□ -1.47
TRAPPC9-203ENST00000517667 MT2AP02795 61 aa5.85□□□□□ -1.47
TRAPPC9-203ENST00000517667 LINC00643Q86TS7 51 aa5.85□□□□□ -1.47
TRAPPC9-203ENST00000517667 SIGMAR1Q99720 223 aa5.85□□□□□ -1.47
TRAPPC9-203ENST00000517667 LINC00846Q9NV44 126 aa5.85□□□□□ -1.47
TRAPPC9-203ENST00000517667 LCE2BO14633 110 aa5.84□□□□□ -1.47
TRAPPC9-203ENST00000517667 NREPQ16612 68 aa5.81□□□□□ -1.48
TRAPPC9-203ENST00000517667 IGFL1Q6UW32 110 aa5.8□□□□□ -1.48
TRAPPC9-203ENST00000517667 IMUPQ9GZP8 106 aa5.8□□□□□ -1.48
TRAPPC9-203ENST00000517667 SS18L2Q9UHA2 77 aa5.8□□□□□ -1.48
TRAPPC9-203ENST00000517667 MT1FP04733 61 aa5.79□□□□□ -1.48
TRAPPC9-203ENST00000517667 KRTAP9-3Q9BYQ3 159 aa5.79□□□□□ -1.48
TRAPPC9-203ENST00000517667 TRBV7-7A0A0K0K1E9 115 aa5.78□□□□□ -1.48
TRAPPC9-203ENST00000517667 KRTAP10-10P60014 251 aa5.78□□□□□ -1.48
TRAPPC9-203ENST00000517667 Q96NJ1 140 aa5.78□□□□□ -1.48
TRAPPC9-203ENST00000517667 CXCL6P80162 114 aa5.77□□□□□ -1.49
TRAPPC9-203ENST00000517667 Q6ZVQ6 151 aa5.77□□□□□ -1.49
TRAPPC9-203ENST00000517667 A0A1W2PNM2 257 aa5.76□□□□□ -1.49
TRAPPC9-203ENST00000517667 SCGB1A1P11684 91 aa5.76□□□□□ -1.49
TRAPPC9-203ENST00000517667 C20orf166-AS1Q96NR2 134 aa5.76□□□□□ -1.49
TRAPPC9-203ENST00000517667 FAM236DA0A1B0GTK5 79 aa5.75□□□□□ -1.49
TRAPPC9-203ENST00000517667 FAM236CP0DP71 79 aa5.75□□□□□ -1.49
TRAPPC9-203ENST00000517667 BPY2O14599 106 aa5.74□□□□□ -1.49
TRAPPC9-203ENST00000517667 MT-ATP8P03928 68 aa5.74□□□□□ -1.49
TRAPPC9-203ENST00000517667 A0A087WSZ3 146 aa5.73□□□□□ -1.49
TRAPPC9-203ENST00000517667 A8MUU9 505 aa5.73□□□□□ -1.49
TRAPPC9-203ENST00000517667 J3KT08 172 aa5.73□□□□□ -1.49
TRAPPC9-203ENST00000517667 KRTAP19-6Q3LI70 58 aa5.73□□□□□ -1.49
TRAPPC9-203ENST00000517667 HIST1H4AP62805 103 aaKnown RBP5.71□□□□□ -1.5
TRAPPC9-203ENST00000517667 KRTAP6-3Q3LI67 103 aa5.71□□□□□ -1.5
TRAPPC9-203ENST00000517667 IGKV3D-7A0A0C4DH55 119 aa5.7□□□□□ -1.5
TRAPPC9-203ENST00000517667 RBM12B-AS1Q9P1G2 102 aa5.7□□□□□ -1.5
TRAPPC9-203ENST00000517667 NDUFB1O75438 58 aa5.68□□□□□ -1.5
TRAPPC9-203ENST00000517667 MPLKIPQ8TAP9 179 aa5.65□□□□□ -1.5
TRAPPC9-203ENST00000517667 FAM236AA0A1B0GUQ0 79 aa5.64□□□□□ -1.51
TRAPPC9-203ENST00000517667 FAM236BA0A1B0GV22 79 aa5.64□□□□□ -1.51
TRAPPC9-203ENST00000517667 ATOX1O00244 68 aa5.64□□□□□ -1.51
TRAPPC9-203ENST00000517667 SMIM20Q8N5G0 67 aa5.63□□□□□ -1.51
TRAPPC9-203ENST00000517667 A8MWP4 228 aa5.62□□□□□ -1.51
TRAPPC9-203ENST00000517667 IGKV4-1P06312 121 aa5.62□□□□□ -1.51
TRAPPC9-203ENST00000517667 HRES1P13985 223 aa5.62□□□□□ -1.51
TRAPPC9-203ENST00000517667 LINC00472Q9H8W2 130 aa5.61□□□□□ -1.51
TRAPPC9-203ENST00000517667 KRTAP16-1A8MUX0 517 aa5.6□□□□□ -1.51
TRAPPC9-203ENST00000517667 ANAPC13Q9BS18 74 aa5.6□□□□□ -1.51
TRAPPC9-203ENST00000517667 A0A087WVE0 104 aa5.59□□□□□ -1.51
TRAPPC9-203ENST00000517667 DSCR10P59022 87 aa5.59□□□□□ -1.51
TRAPPC9-203ENST00000517667 HCG22E2RYF7 251 aa5.58□□□□□ -1.52
TRAPPC9-203ENST00000517667 K7EQZ3 153 aa5.58□□□□□ -1.52
TRAPPC9-203ENST00000517667 PRR15Q8IV56 129 aa5.58□□□□□ -1.52
TRAPPC9-203ENST00000517667 DEFB116Q30KQ4 102 aa5.57□□□□□ -1.52
TRAPPC9-203ENST00000517667 PCP4P48539 62 aa5.56□□□□□ -1.52
TRAPPC9-203ENST00000517667 LINC00313P59037 77 aa5.56□□□□□ -1.52
TRAPPC9-203ENST00000517667 NOTCH2NLQ7Z3S9 236 aa5.56□□□□□ -1.52
TRAPPC9-203ENST00000517667 Q8N9L7 120 aa5.56□□□□□ -1.52
TRAPPC9-203ENST00000517667 A0A1B0GVX0 72 aa5.55□□□□□ -1.52
TRAPPC9-203ENST00000517667 C8orf87E5RJ46 101 aa5.55□□□□□ -1.52
TRAPPC9-203ENST00000517667 NEBP20929 6669 aa5.55□□□□□ -1.52
TRAPPC9-203ENST00000517667 CASC2Q6XLA1 102 aa5.54□□□□□ -1.52
TRAPPC9-203ENST00000517667 TRAV7A0A075B6U4 112 aa5.52□□□□□ -1.53
TRAPPC9-203ENST00000517667 IGHV6-1A0A0B4J1U7 121 aa5.52□□□□□ -1.53
TRAPPC9-203ENST00000517667 SERP2Q8N6R1 65 aa5.52□□□□□ -1.53
TRAPPC9-203ENST00000517667 hDV103S1A0JD37 113 aa5.51□□□□□ -1.53
TRAPPC9-203ENST00000517667 C8orf17Q9NRJ1 99 aa5.51□□□□□ -1.53
TRAPPC9-203ENST00000517667 WFDC13Q8IUB5 93 aa5.5□□□□□ -1.53
TRAPPC9-203ENST00000517667 UQCRQO14949 82 aa5.49□□□□□ -1.53
TRAPPC9-203ENST00000517667 COX7CP15954 63 aa5.49□□□□□ -1.53
TRAPPC9-203ENST00000517667 Q8N9P0 234 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC9-203ENST00000517667 TMEM254Q8TBM7 123 aa5.49□□□□□ -1.53
TRAPPC9-203ENST00000517667 TP53AIP1Q9HCN2 124 aa5.49□□□□□ -1.53
TRAPPC9-203ENST00000517667 MMP24-AS1A0A0U1RRL7 71 aa5.48□□□□□ -1.53
TRAPPC9-203ENST00000517667 KRTAP20-1Q3LI63 56 aa5.47□□□□□ -1.53
TRAPPC9-203ENST00000517667 MRPL34Q9BQ48 92 aaKnown RBP5.47□□□□□ -1.53
TRAPPC9-203ENST00000517667 MUC12Q9UKN1 5478 aa5.45□□□□□ -1.54
TRAPPC9-203ENST00000517667 NDUFS5O43920 106 aa5.45□□□□□ -1.54
TRAPPC9-203ENST00000517667 MP68P56378 58 aa5.45□□□□□ -1.54
TRAPPC9-203ENST00000517667 C5orf47Q569G3 176 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms