RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 Q1RN00 199 aa4.06□□□□□ -1.76
TNFRSF11B-202ENST00000517352 ARL17AQ8IVW1 177 aa4.06□□□□□ -1.76
TNFRSF11B-202ENST00000517352 UQCR10Q9UDW1 63 aa4.06□□□□□ -1.76
TNFRSF11B-202ENST00000517352 CRCT1Q9UGL9 99 aa4.06□□□□□ -1.76
TNFRSF11B-202ENST00000517352 A0A0J9YXY3 114 aa4.05□□□□□ -1.76
TNFRSF11B-202ENST00000517352 KRTAP16-1A8MUX0 517 aa4.05□□□□□ -1.76
TNFRSF11B-202ENST00000517352 SERF1AO75920 110 aa4.05□□□□□ -1.76
TNFRSF11B-202ENST00000517352 SERP1Q9Y6X1 66 aa4.05□□□□□ -1.76
TNFRSF11B-202ENST00000517352 TEX49A0A1B0GTD5 131 aa4.04□□□□□ -1.76
TNFRSF11B-202ENST00000517352 H3BT86 120 aa4.04□□□□□ -1.76
TNFRSF11B-202ENST00000517352 K7EP34 96 aa4.04□□□□□ -1.76
TNFRSF11B-202ENST00000517352 K7ERJ3 54 aa4.04□□□□□ -1.76
TNFRSF11B-202ENST00000517352 SNCGO76070 127 aa4.04□□□□□ -1.76
TNFRSF11B-202ENST00000517352 LINC01554Q52M75 96 aa4.04□□□□□ -1.76
TNFRSF11B-202ENST00000517352 KRTAP4-1Q9BYQ7 146 aa4.04□□□□□ -1.76
TNFRSF11B-202ENST00000517352 TRBV20-1A0A075B6N2 111 aa4.03□□□□□ -1.76
TNFRSF11B-202ENST00000517352 F8WEM9 126 aa4.03□□□□□ -1.76
TNFRSF11B-202ENST00000517352 TCL1BO95988 128 aa4.03□□□□□ -1.76
TNFRSF11B-202ENST00000517352 MT-ATP8P03928 68 aa4.03□□□□□ -1.76
TNFRSF11B-202ENST00000517352 LINC00308Q8TCZ7 52 aa4.03□□□□□ -1.76
TNFRSF11B-202ENST00000517352 ZNF815PA8K554 130 aa4.02□□□□□ -1.77
TNFRSF11B-202ENST00000517352 NHP2Q9NX24 153 aaKnown RBP4.02□□□□□ -1.77
TNFRSF11B-202ENST00000517352 F8W1H4 67 aa4.01□□□□□ -1.77
TNFRSF11B-202ENST00000517352 SOSTDC1Q6X4U4 206 aa4.01□□□□□ -1.77
TNFRSF11B-202ENST00000517352 C7orf65Q6ZTY9 151 aa4.01□□□□□ -1.77
TNFRSF11B-202ENST00000517352 HIST1H2BLQ99880 126 aa4.01□□□□□ -1.77
TNFRSF11B-202ENST00000517352 TIMM17BO60830 172 aa4□□□□□ -1.77
TNFRSF11B-202ENST00000517352 SPRR1BP22528 89 aa4□□□□□ -1.77
TNFRSF11B-202ENST00000517352 ELOF1P60002 83 aaKnown RBP4□□□□□ -1.77
TNFRSF11B-202ENST00000517352 HIST1H4AP62805 103 aaKnown RBP3.99□□□□□ -1.77
TNFRSF11B-202ENST00000517352 ATP11AUNQ6ZP68 121 aa3.99□□□□□ -1.77
TNFRSF11B-202ENST00000517352 PCP2Q8IVA1 136 aa3.99□□□□□ -1.77
TNFRSF11B-202ENST00000517352 SYS1-DBNDD2H3BUS1 97 aa3.98□□□□□ -1.77
TNFRSF11B-202ENST00000517352 MT1HP80294 61 aa3.98□□□□□ -1.77
TNFRSF11B-202ENST00000517352 RPL37P61927 97 aaKnown RBP3.97□□□□□ -1.77
TNFRSF11B-202ENST00000517352 CAMK2N1Q7Z7J9 78 aa3.97□□□□□ -1.77
TNFRSF11B-202ENST00000517352 TRAV13-2A0A0B4J235 113 aa3.96□□□□□ -1.78
TNFRSF11B-202ENST00000517352 K7ERS5 55 aa3.96□□□□□ -1.78
TNFRSF11B-202ENST00000517352 COX7CP15954 63 aa3.96□□□□□ -1.78
TNFRSF11B-202ENST00000517352 KRTDAPP60985 99 aa3.96□□□□□ -1.78
TNFRSF11B-202ENST00000517352 SMIM29Q86T20 159 aa3.96□□□□□ -1.78
TNFRSF11B-202ENST00000517352 KRTAP3-1Q9BYR8 98 aa3.95□□□□□ -1.78
TNFRSF11B-202ENST00000517352 A0A0G2JQZ4 141 aa3.94□□□□□ -1.78
TNFRSF11B-202ENST00000517352 LITAFQ99732 161 aa3.94□□□□□ -1.78
TNFRSF11B-202ENST00000517352 C8orf17Q9NRJ1 99 aa3.94□□□□□ -1.78
TNFRSF11B-202ENST00000517352 KRTAP10-6P60371 365 aaPredicted RBP3.93□□□□□ -1.78
TNFRSF11B-202ENST00000517352 LUZP6Q538Z0 58 aa3.93□□□□□ -1.78
TNFRSF11B-202ENST00000517352 MUSTN1Q8IVN3 82 aa3.93□□□□□ -1.78
TNFRSF11B-202ENST00000517352 OBSCN-AS1Q96MR7 158 aa3.93□□□□□ -1.78
TNFRSF11B-202ENST00000517352 DSCR8Q96T75 97 aa3.93□□□□□ -1.78
TNFRSF11B-202ENST00000517352 TTTY13Q9BZ97 58 aa3.93□□□□□ -1.78
TNFRSF11B-202ENST00000517352 IGLV5-48A0A075B6I7 105 aa3.92□□□□□ -1.78
TNFRSF11B-202ENST00000517352 ATP5EP56381 51 aaPredicted RBP3.92□□□□□ -1.78
TNFRSF11B-202ENST00000517352 Q6JHZ5 121 aa3.92□□□□□ -1.78
TNFRSF11B-202ENST00000517352 SPCS1Q9Y6A9 102 aa3.92□□□□□ -1.78
TNFRSF11B-202ENST00000517352 hADV29S1A0JD25 119 aa3.91□□□□□ -1.78
TNFRSF11B-202ENST00000517352 SMIM11BQ8TCY0 68 aa3.91□□□□□ -1.78
TNFRSF11B-202ENST00000517352 CLEC2BQ92478 149 aa3.91□□□□□ -1.78
TNFRSF11B-202ENST00000517352 C3orf79P0CE67 100 aa3.9□□□□□ -1.79
TNFRSF11B-202ENST00000517352 Q96NJ1 140 aa3.9□□□□□ -1.79
TNFRSF11B-202ENST00000517352 KRTAP19-2Q3LHN2 52 aa3.89□□□□□ -1.79
TNFRSF11B-202ENST00000517352 Q6ZQY7 126 aa3.89□□□□□ -1.79
TNFRSF11B-202ENST00000517352 PPDPFLQ8WWR9 84 aa3.89□□□□□ -1.79
TNFRSF11B-202ENST00000517352 TRBV7-7A0A0K0K1E9 115 aa3.88□□□□□ -1.79
TNFRSF11B-202ENST00000517352 A6NED7 52 aa3.88□□□□□ -1.79
TNFRSF11B-202ENST00000517352 ATOX1O00244 68 aa3.88□□□□□ -1.79
TNFRSF11B-202ENST00000517352 A0A1W2PPM0 123 aa3.87□□□□□ -1.79
TNFRSF11B-202ENST00000517352 BPY2O14599 106 aa3.87□□□□□ -1.79
TNFRSF11B-202ENST00000517352 CFC1P0CG37 223 aa3.87□□□□□ -1.79
TNFRSF11B-202ENST00000517352 SPATA45Q537H7 98 aa3.87□□□□□ -1.79
TNFRSF11B-202ENST00000517352 BVES-AS1Q5T3Y7 98 aa3.87□□□□□ -1.79
TNFRSF11B-202ENST00000517352 LINC00575Q6W349 94 aa3.87□□□□□ -1.79
TNFRSF11B-202ENST00000517352 IGFL1Q6UW32 110 aa3.86□□□□□ -1.79
TNFRSF11B-202ENST00000517352 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.85□□□□□ -1.79
TNFRSF11B-202ENST00000517352 H3BUT2 72 aa3.84□□□□□ -1.79
TNFRSF11B-202ENST00000517352 ETDBQ3ZM63 59 aa3.83□□□□□ -1.8
TNFRSF11B-202ENST00000517352 FLGP20930 4061 aaPredicted RBP3.82□□□□□ -1.8
TNFRSF11B-202ENST00000517352 A0A1B0GVX0 72 aa3.82□□□□□ -1.8
TNFRSF11B-202ENST00000517352 A8MWP4 228 aa3.82□□□□□ -1.8
TNFRSF11B-202ENST00000517352 A6NN06 94 aa3.81□□□□□ -1.8
TNFRSF11B-202ENST00000517352 ADM2Q7Z4H4 148 aa3.81□□□□□ -1.8
TNFRSF11B-202ENST00000517352 A0A087WSZ3 146 aa3.8□□□□□ -1.8
TNFRSF11B-202ENST00000517352 RBM3P98179 157 aaKnown RBP3.8□□□□□ -1.8
TNFRSF11B-202ENST00000517352 H0YGX0 51 aa3.79□□□□□ -1.8
TNFRSF11B-202ENST00000517352 DSCR10P59022 87 aa3.79□□□□□ -1.8
TNFRSF11B-202ENST00000517352 hDV103S1A0JD37 113 aa3.78□□□□□ -1.8
TNFRSF11B-202ENST00000517352 SERP2Q8N6R1 65 aa3.78□□□□□ -1.8
TNFRSF11B-202ENST00000517352 LINC00846Q9NV44 126 aa3.78□□□□□ -1.8
TNFRSF11B-202ENST00000517352 USH2AO75445 5202 aa3.78□□□□□ -1.8
TNFRSF11B-202ENST00000517352 DNAL4O96015 105 aa3.77□□□□□ -1.81
TNFRSF11B-202ENST00000517352 CCKP06307 115 aa3.77□□□□□ -1.81
TNFRSF11B-202ENST00000517352 IGKV4-1P06312 121 aa3.77□□□□□ -1.81
TNFRSF11B-202ENST00000517352 C2orf91Q6ZV80 131 aa3.77□□□□□ -1.81
TNFRSF11B-202ENST00000517352 CEND1Q8N111 149 aa3.77□□□□□ -1.81
TNFRSF11B-202ENST00000517352 C20orf166-AS1Q96NR2 134 aa3.77□□□□□ -1.81
TNFRSF11B-202ENST00000517352 A0A0B4J2C4 111 aa3.76□□□□□ -1.81
TNFRSF11B-202ENST00000517352 A8MUU9 505 aa3.76□□□□□ -1.81
TNFRSF11B-202ENST00000517352 NDUFC1O43677 76 aa3.75□□□□□ -1.81
TNFRSF11B-202ENST00000517352 KRTAP10-10P60014 251 aa3.74□□□□□ -1.81
TNFRSF11B-202ENST00000517352 Q1T7F1 81 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms