RNA–Protein interactions for RNA: ENST00000516918.1

SCARNA11.1-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 132 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.1-201ENST00000516918 KRTAP9-8Q9BYQ0 159 aa3.61□□□□□ -1.83
SCARNA11.1-201ENST00000516918 FCGBPQ9Y6R7 5405 aaPredicted RBP3.6□□□□□ -1.83
SCARNA11.1-201ENST00000516918 A0A087WSZ3 146 aa3.6□□□□□ -1.83
SCARNA11.1-201ENST00000516918 A0A1B0GV72 72 aa3.6□□□□□ -1.83
SCARNA11.1-201ENST00000516918 A0A1W2PNM2 257 aa3.6□□□□□ -1.83
SCARNA11.1-201ENST00000516918 ATP11AUNQ6ZP68 121 aa3.6□□□□□ -1.83
SCARNA11.1-201ENST00000516918 OBSCN-AS1Q96MR7 158 aa3.6□□□□□ -1.83
SCARNA11.1-201ENST00000516918 VPS25Q9BRG1 176 aa3.6□□□□□ -1.83
SCARNA11.1-201ENST00000516918 LOC110117498A0A087WWA1 95 aa3.59□□□□□ -1.83
SCARNA11.1-201ENST00000516918 K7EP34 96 aa3.59□□□□□ -1.83
SCARNA11.1-201ENST00000516918 KRTAP19-1Q8IUB9 90 aa3.58□□□□□ -1.84
SCARNA11.1-201ENST00000516918 NREPQ16612 68 aa3.57□□□□□ -1.84
SCARNA11.1-201ENST00000516918 Q6ZQT0 140 aa3.57□□□□□ -1.84
SCARNA11.1-201ENST00000516918 Q75L30 129 aa3.57□□□□□ -1.84
SCARNA11.1-201ENST00000516918 C14orf132Q9NPU4 83 aa3.57□□□□□ -1.84
SCARNA11.1-201ENST00000516918 J3KT08 172 aa3.56□□□□□ -1.84
SCARNA11.1-201ENST00000516918 LCE2BO14633 110 aa3.56□□□□□ -1.84
SCARNA11.1-201ENST00000516918 MT2AP02795 61 aa3.56□□□□□ -1.84
SCARNA11.1-201ENST00000516918 IGKV4-1P06312 121 aa3.56□□□□□ -1.84
SCARNA11.1-201ENST00000516918 NDUFB1O75438 58 aa3.55□□□□□ -1.84
SCARNA11.1-201ENST00000516918 MTURNQ8N3F0 131 aa3.55□□□□□ -1.84
SCARNA11.1-201ENST00000516918 Q96NJ1 140 aa3.55□□□□□ -1.84
SCARNA11.1-201ENST00000516918 LINC00472Q9H8W2 130 aa3.55□□□□□ -1.84
SCARNA11.1-201ENST00000516918 SYNE2Q8WXH0 6885 aaKnown RBP3.55□□□□□ -1.84
SCARNA11.1-201ENST00000516918 SMCPP49901 116 aaPredicted RBP3.54□□□□□ -1.84
SCARNA11.1-201ENST00000516918 LINC00313P59037 77 aa3.54□□□□□ -1.84
SCARNA11.1-201ENST00000516918 MT1FP04733 61 aa3.53□□□□□ -1.84
SCARNA11.1-201ENST00000516918 DEFB116Q30KQ4 102 aa3.53□□□□□ -1.84
SCARNA11.1-201ENST00000516918 PRO0461Q9UI25 63 aa3.53□□□□□ -1.84
SCARNA11.1-201ENST00000516918 MACF1Q9UPN3 7388 aaKnown RBP3.52□□□□□ -1.85
SCARNA11.1-201ENST00000516918 KRTAP10-10P60014 251 aa3.51□□□□□ -1.85
SCARNA11.1-201ENST00000516918 ETDBQ3ZM63 59 aa3.51□□□□□ -1.85
SCARNA11.1-201ENST00000516918 SIGMAR1Q99720 223 aa3.51□□□□□ -1.85
SCARNA11.1-201ENST00000516918 KRTAP9-3Q9BYQ3 159 aa3.51□□□□□ -1.85
SCARNA11.1-201ENST00000516918 IGHV6-1A0A0B4J1U7 121 aa3.5□□□□□ -1.85
SCARNA11.1-201ENST00000516918 FAM236DA0A1B0GTK5 79 aa3.5□□□□□ -1.85
SCARNA11.1-201ENST00000516918 ACYP1P07311 99 aa3.5□□□□□ -1.85
SCARNA11.1-201ENST00000516918 FAM236CP0DP71 79 aa3.5□□□□□ -1.85
SCARNA11.1-201ENST00000516918 C20orf166-AS1Q96NR2 134 aa3.5□□□□□ -1.85
SCARNA11.1-201ENST00000516918 UBL5Q9BZL1 73 aa3.5□□□□□ -1.85
SCARNA11.1-201ENST00000516918 A8MUU9 505 aa3.49□□□□□ -1.85
SCARNA11.1-201ENST00000516918 C8orf87E5RJ46 101 aa3.49□□□□□ -1.85
SCARNA11.1-201ENST00000516918 BPY2O14599 106 aa3.49□□□□□ -1.85
SCARNA11.1-201ENST00000516918 A0A1B0GV90 55 aa3.48□□□□□ -1.85
SCARNA11.1-201ENST00000516918 A0A1B0GVX0 72 aa3.48□□□□□ -1.85
SCARNA11.1-201ENST00000516918 A8MWP4 228 aa3.48□□□□□ -1.85
SCARNA11.1-201ENST00000516918 DSCR10P59022 87 aa3.47□□□□□ -1.85
SCARNA11.1-201ENST00000516918 PRR15Q8IV56 129 aa3.47□□□□□ -1.85
SCARNA11.1-201ENST00000516918 KRTAP16-1A8MUX0 517 aa3.46□□□□□ -1.86
SCARNA11.1-201ENST00000516918 Q6ZVQ6 151 aa3.46□□□□□ -1.86
SCARNA11.1-201ENST00000516918 LINC00846Q9NV44 126 aa3.46□□□□□ -1.86
SCARNA11.1-201ENST00000516918 J3QR89 54 aa3.45□□□□□ -1.86
SCARNA11.1-201ENST00000516918 IGKV3D-7A0A0C4DH55 119 aa3.44□□□□□ -1.86
SCARNA11.1-201ENST00000516918 HRES1P13985 223 aa3.44□□□□□ -1.86
SCARNA11.1-201ENST00000516918 KRTAP19-6Q3LI70 58 aa3.44□□□□□ -1.86
SCARNA11.1-201ENST00000516918 RBM12B-AS1Q9P1G2 102 aa3.44□□□□□ -1.86
SCARNA11.1-201ENST00000516918 CXCL6P80162 114 aa3.43□□□□□ -1.86
SCARNA11.1-201ENST00000516918 NOTCH2NLQ7Z3S9 236 aa3.43□□□□□ -1.86
SCARNA11.1-201ENST00000516918 C8orf17Q9NRJ1 99 aa3.43□□□□□ -1.86
SCARNA11.1-201ENST00000516918 FAM240AA0A1B0GVK7 77 aa3.42□□□□□ -1.86
SCARNA11.1-201ENST00000516918 hDV103S1A0JD37 113 aa3.42□□□□□ -1.86
SCARNA11.1-201ENST00000516918 MPLKIPQ8TAP9 179 aa3.42□□□□□ -1.86
SCARNA11.1-201ENST00000516918 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
SCARNA11.1-201ENST00000516918 Q8N9P0 234 aaPredicted RBP3.41□□□□□ -1.86
SCARNA11.1-201ENST00000516918 K7EQZ3 153 aa3.4□□□□□ -1.87
SCARNA11.1-201ENST00000516918 TMEM254Q8TBM7 123 aa3.4□□□□□ -1.87
SCARNA11.1-201ENST00000516918 MRPL34Q9BQ48 92 aaKnown RBP3.4□□□□□ -1.87
SCARNA11.1-201ENST00000516918 NDUFS5O43920 106 aa3.39□□□□□ -1.87
SCARNA11.1-201ENST00000516918 CASC2Q6XLA1 102 aa3.39□□□□□ -1.87
SCARNA11.1-201ENST00000516918 LINC00643Q86TS7 51 aa3.39□□□□□ -1.87
SCARNA11.1-201ENST00000516918 MMP24-AS1A0A0U1RRL7 71 aa3.37□□□□□ -1.87
SCARNA11.1-201ENST00000516918 ATP5EP2Q5VTU8 51 aa3.37□□□□□ -1.87
SCARNA11.1-201ENST00000516918 Q8N9L7 120 aa3.37□□□□□ -1.87
SCARNA11.1-201ENST00000516918 ZCCHC13Q8WW36 166 aaKnown RBP3.37□□□□□ -1.87
SCARNA11.1-201ENST00000516918 HCG22E2RYF7 251 aa3.36□□□□□ -1.87
SCARNA11.1-201ENST00000516918 K7ERU9 68 aa3.36□□□□□ -1.87
SCARNA11.1-201ENST00000516918 HIST1H4AP62805 103 aaKnown RBP3.36□□□□□ -1.87
SCARNA11.1-201ENST00000516918 WFDC13Q8IUB5 93 aa3.36□□□□□ -1.87
SCARNA11.1-201ENST00000516918 TP53AIP1Q9HCN2 124 aa3.36□□□□□ -1.87
SCARNA11.1-201ENST00000516918 NEBP20929 6669 aa3.36□□□□□ -1.87
SCARNA11.1-201ENST00000516918 SPINK7P58062 85 aa3.33□□□□□ -1.88
SCARNA11.1-201ENST00000516918 IMUPQ9GZP8 106 aa3.3□□□□□ -1.88
SCARNA11.1-201ENST00000516918 SCGB1A1P11684 91 aa3.29□□□□□ -1.88
SCARNA11.1-201ENST00000516918 Q5W150 140 aa3.29□□□□□ -1.88
SCARNA11.1-201ENST00000516918 UQCRQO14949 82 aa3.28□□□□□ -1.88
SCARNA11.1-201ENST00000516918 IGKV2D-30A0A075B6S6 120 aa3.27□□□□□ -1.89
SCARNA11.1-201ENST00000516918 IGKV2-30P06310 120 aa3.27□□□□□ -1.89
SCARNA11.1-201ENST00000516918 KRTAP20-1Q3LI63 56 aa3.27□□□□□ -1.89
SCARNA11.1-201ENST00000516918 MUC12Q9UKN1 5478 aa3.27□□□□□ -1.89
SCARNA11.1-201ENST00000516918 ATOX1O00244 68 aa3.26□□□□□ -1.89
SCARNA11.1-201ENST00000516918 C5orf47Q569G3 176 aa3.26□□□□□ -1.89
SCARNA11.1-201ENST00000516918 C7orf65Q6ZTY9 151 aa3.26□□□□□ -1.89
SCARNA11.1-201ENST00000516918 A0A087WVE0 104 aa3.25□□□□□ -1.89
SCARNA11.1-201ENST00000516918 MP68P56378 58 aa3.24□□□□□ -1.89
SCARNA11.1-201ENST00000516918 TRAV22A0A0B4J277 110 aa3.23□□□□□ -1.89
SCARNA11.1-201ENST00000516918 LOC101927531A0A1B0GV80 90 aa3.23□□□□□ -1.89
SCARNA11.1-201ENST00000516918 A6NN06 94 aa3.23□□□□□ -1.89
SCARNA11.1-201ENST00000516918 SMIM20Q8N5G0 67 aa3.23□□□□□ -1.89
SCARNA11.1-201ENST00000516918 CYP4F30PQ9H0H9 118 aa3.23□□□□□ -1.89
SCARNA11.1-201ENST00000516918 MT-ATP8P03928 68 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 297.9 ms