RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 ZNF720Q7Z2F6 126 aa-6.07□□□□□ -3.38
SNORA40.13-201ENST00000516379 CCNB3Q8WWL7 1395 aa-6.07□□□□□ -3.38
SNORA40.13-201ENST00000516379 MED14O60244 1454 aa-6.08□□□□□ -3.38
SNORA40.13-201ENST00000516379 AKAIN1P0CW23 69 aa-6.1□□□□□ -3.39
SNORA40.13-201ENST00000516379 PLGLAQ15195 96 aa-6.1□□□□□ -3.39
SNORA40.13-201ENST00000516379 DEFB131BA0A096LNP1 70 aa-6.11□□□□□ -3.39
SNORA40.13-201ENST00000516379 KIF21BO75037 1637 aa-6.11□□□□□ -3.39
SNORA40.13-201ENST00000516379 CYB5AP00167 134 aa-6.12□□□□□ -3.39
SNORA40.13-201ENST00000516379 CD163L1Q9NR16 1453 aa-6.12□□□□□ -3.39
SNORA40.13-201ENST00000516379 ARFGEF2Q9Y6D5 1785 aa-6.12□□□□□ -3.39
SNORA40.13-201ENST00000516379 PIK3C2BO00750 1634 aa-6.13□□□□□ -3.39
SNORA40.13-201ENST00000516379 MYOM2P54296 1465 aa-6.13□□□□□ -3.39
SNORA40.13-201ENST00000516379 NCBP2-AS2Q69YL0 99 aa-6.13□□□□□ -3.39
SNORA40.13-201ENST00000516379 SVBPQ8N300 66 aa-6.13□□□□□ -3.39
SNORA40.13-201ENST00000516379 TJP1Q07157 1748 aa-6.13□□□□□ -3.39
SNORA40.13-201ENST00000516379 NRKQ7Z2Y5 1582 aa-6.14□□□□□ -3.39
SNORA40.13-201ENST00000516379 MINOS1Q5TGZ0 78 aa-6.14□□□□□ -3.39
SNORA40.13-201ENST00000516379 PPLO60437 1756 aa-6.14□□□□□ -3.39
SNORA40.13-201ENST00000516379 CROCC2H7BZ55 1655 aa-6.14□□□□□ -3.39
SNORA40.13-201ENST00000516379 CFAP47Q6ZTR5 3102 aa-6.15□□□□□ -3.39
SNORA40.13-201ENST00000516379 SFTA3P0C7M3 94 aa-6.16□□□□□ -3.4
SNORA40.13-201ENST00000516379 NRAPQ86VF7 1730 aa-6.17□□□□□ -3.4
SNORA40.13-201ENST00000516379 CLTCQ00610 1675 aaKnown RBP-6.17□□□□□ -3.4
SNORA40.13-201ENST00000516379 UBR1Q8IWV7 1749 aa-6.19□□□□□ -3.4
SNORA40.13-201ENST00000516379 NDUFA4O00483 81 aa-6.19□□□□□ -3.4
SNORA40.13-201ENST00000516379 ACBD7Q8N6N7 88 aa-6.19□□□□□ -3.4
SNORA40.13-201ENST00000516379 IER3IP1Q9Y5U9 82 aa-6.19□□□□□ -3.4
SNORA40.13-201ENST00000516379 ROCK2O75116 1388 aaKnown RBP-6.19□□□□□ -3.4
SNORA40.13-201ENST00000516379 MAP3K4Q9Y6R4 1608 aa-6.2□□□□□ -3.4
SNORA40.13-201ENST00000516379 RPL13AP3Q6NVV1 102 aa-6.2□□□□□ -3.4
SNORA40.13-201ENST00000516379 NDUFB1O75438 58 aa-6.21□□□□□ -3.4
SNORA40.13-201ENST00000516379 PYDC1Q8WXC3 89 aa-6.21□□□□□ -3.4
SNORA40.13-201ENST00000516379 NCOA2Q15596 1464 aa-6.22□□□□□ -3.4
SNORA40.13-201ENST00000516379 USP34Q70CQ2 3546 aa-6.22□□□□□ -3.41
SNORA40.13-201ENST00000516379 GNGT2O14610 69 aa-6.23□□□□□ -3.41
SNORA40.13-201ENST00000516379 IFI27P40305 119 aaPredicted RBP-6.23□□□□□ -3.41
SNORA40.13-201ENST00000516379 CRIP1P50238 77 aa-6.23□□□□□ -3.41
SNORA40.13-201ENST00000516379 C20orf78Q9BR46 151 aa-6.23□□□□□ -3.41
SNORA40.13-201ENST00000516379 RNF17Q9BXT8 1623 aaKnown RBP-6.24□□□□□ -3.41
SNORA40.13-201ENST00000516379 SNAPC5O75971 98 aa-6.24□□□□□ -3.41
SNORA40.13-201ENST00000516379 MRPS10P82664 201 aaKnown RBP-6.24□□□□□ -3.41
SNORA40.13-201ENST00000516379 CCDC88BA6NC98 1476 aa-6.25□□□□□ -3.41
SNORA40.13-201ENST00000516379 C6orf48Q9UBA6 75 aa-6.25□□□□□ -3.41
SNORA40.13-201ENST00000516379 MRPL33O75394 65 aaKnown RBP-6.26□□□□□ -3.41
SNORA40.13-201ENST00000516379 FCER1GP30273 86 aa-6.26□□□□□ -3.41
SNORA40.13-201ENST00000516379 NALCNQ8IZF0 1738 aa-6.26□□□□□ -3.41
SNORA40.13-201ENST00000516379 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-6.26□□□□□ -3.41
SNORA40.13-201ENST00000516379 RICTORQ6R327 1708 aa-6.28□□□□□ -3.41
SNORA40.13-201ENST00000516379 HMGN2P05204 90 aaKnown RBP-6.28□□□□□ -3.41
SNORA40.13-201ENST00000516379 INO80Q9ULG1 1556 aaPredicted RBP-6.28□□□□□ -3.42
SNORA40.13-201ENST00000516379 ATOX1O00244 68 aa-6.29□□□□□ -3.42
SNORA40.13-201ENST00000516379 UQCRHLA0A096LP55 91 aa-6.3□□□□□ -3.42
SNORA40.13-201ENST00000516379 EPRSP07814 1512 aaKnown RBP-6.3□□□□□ -3.42
SNORA40.13-201ENST00000516379 PMCHL2Q9BQD1 86 aa-6.31□□□□□ -3.42
SNORA40.13-201ENST00000516379 PZPP20742 1482 aa-6.33□□□□□ -3.42
SNORA40.13-201ENST00000516379 KIF14Q15058 1648 aa-6.33□□□□□ -3.42
SNORA40.13-201ENST00000516379 NEXMIFQ5QGS0 1516 aa-6.34□□□□□ -3.42
SNORA40.13-201ENST00000516379 UMAD1C9J7I0 102 aa-6.34□□□□□ -3.42
SNORA40.13-201ENST00000516379 FANCAO15360 1455 aa-6.35□□□□□ -3.43
SNORA40.13-201ENST00000516379 LINC00032P0C843 101 aa-6.36□□□□□ -3.43
SNORA40.13-201ENST00000516379 PPP3R1P63098 170 aa-6.37□□□□□ -3.43
SNORA40.13-201ENST00000516379 PREX2Q70Z35 1606 aa-6.39□□□□□ -3.43
SNORA40.13-201ENST00000516379 KCNQ1DNQ9H478 68 aa-6.39□□□□□ -3.43
SNORA40.13-201ENST00000516379 ZFYVE16Q7Z3T8 1539 aa-6.4□□□□□ -3.43
SNORA40.13-201ENST00000516379 MYO5CQ9NQX4 1742 aa-6.4□□□□□ -3.43
SNORA40.13-201ENST00000516379 URB2Q14146 1524 aaKnown RBP-6.4□□□□□ -3.43
SNORA40.13-201ENST00000516379 GNG4P50150 75 aa-6.41□□□□□ -3.44
SNORA40.13-201ENST00000516379 COL5A1-AS1Q5SY13 56 aa-6.41□□□□□ -3.44
SNORA40.13-201ENST00000516379 ASXL1Q8IXJ9 1541 aa-6.41□□□□□ -3.44
SNORA40.13-201ENST00000516379 ARHGAP35Q9NRY4 1499 aa-6.41□□□□□ -3.44
SNORA40.13-201ENST00000516379 MYO3AQ8NEV4 1616 aa-6.43□□□□□ -3.44
SNORA40.13-201ENST00000516379 FAM208AQ9UK61 1670 aaKnown RBP-6.45□□□□□ -3.44
SNORA40.13-201ENST00000516379 HFM1A2PYH4 1435 aa-6.46□□□□□ -3.44
SNORA40.13-201ENST00000516379 FAUP35544 74 aaKnown RBP-6.46□□□□□ -3.44
SNORA40.13-201ENST00000516379 MYMXA0A1B0GTQ4 84 aa-6.47□□□□□ -3.45
SNORA40.13-201ENST00000516379 CFAP43Q8NDM7 1665 aa-6.48□□□□□ -3.45
SNORA40.13-201ENST00000516379 UBL5Q9BZL1 73 aa-6.48□□□□□ -3.45
SNORA40.13-201ENST00000516379 DPY30Q9C005 99 aa-6.48□□□□□ -3.45
SNORA40.13-201ENST00000516379 UNC13AQ9UPW8 1703 aa-6.49□□□□□ -3.45
SNORA40.13-201ENST00000516379 NREPQ16612 68 aa-6.49□□□□□ -3.45
SNORA40.13-201ENST00000516379 PEA15Q15121 130 aa-6.51□□□□□ -3.45
SNORA40.13-201ENST00000516379 UNC80Q8N2C7 3258 aa-6.51□□□□□ -3.45
SNORA40.13-201ENST00000516379 NHSQ6T4R5 1651 aa-6.52□□□□□ -3.45
SNORA40.13-201ENST00000516379 SMIM11AP58511 58 aa-6.52□□□□□ -3.45
SNORA40.13-201ENST00000516379 NDUFA2O43678 99 aa-6.53□□□□□ -3.45
SNORA40.13-201ENST00000516379 SARNPP82979 210 aaKnown RBP-6.54□□□□□ -3.46
SNORA40.13-201ENST00000516379 EEA1Q15075 1411 aa-6.54□□□□□ -3.46
SNORA40.13-201ENST00000516379 CLASP1Q7Z460 1538 aa-6.55□□□□□ -3.46
SNORA40.13-201ENST00000516379 CORTO00230 105 aa-6.56□□□□□ -3.46
SNORA40.13-201ENST00000516379 CEBPZOSA8MTT3 80 aa-6.57□□□□□ -3.46
SNORA40.13-201ENST00000516379 HMGA1P17096 107 aaKnown RBP-6.57□□□□□ -3.46
SNORA40.13-201ENST00000516379 TMEM203Q969S6 136 aa-6.57□□□□□ -3.46
SNORA40.13-201ENST00000516379 RABAC1Q9UI14 185 aa-6.57□□□□□ -3.46
SNORA40.13-201ENST00000516379 DNAH12Q6ZR08 3092 aa-6.58□□□□□ -3.46
SNORA40.13-201ENST00000516379 AKAP12Q02952 1782 aa-6.59□□□□□ -3.47
SNORA40.13-201ENST00000516379 S100A1P23297 94 aa-6.6□□□□□ -3.47
SNORA40.13-201ENST00000516379 GTF2H5Q6ZYL4 71 aa-6.6□□□□□ -3.47
SNORA40.13-201ENST00000516379 KAAG1Q9UBP8 84 aa-6.61□□□□□ -3.47
SNORA40.13-201ENST00000516379 RALGAPBQ86X10 1494 aa-6.61□□□□□ -3.47
SNORA40.13-201ENST00000516379 S100A8P05109 93 aa-6.62□□□□□ -3.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms