RNA–Protein interactions for RNA: ENST00000515675.1

AFP-207, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 317 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-207ENST00000515675 DEFB106AQ8N104 65 aa0.21□□□□□ -2.38
AFP-207ENST00000515675 TMEM167BQ9NRX6 74 aa0.21□□□□□ -2.38
AFP-207ENST00000515675 NSD1Q96L73 2696 aaPredicted RBP0.21□□□□□ -2.38
AFP-207ENST00000515675 USP9YO00507 2555 aaPredicted RBP0.21□□□□□ -2.38
AFP-207ENST00000515675 MTORP42345 2549 aa0.21□□□□□ -2.38
AFP-207ENST00000515675 LYSTQ99698 3801 aa0.21□□□□□ -2.38
AFP-207ENST00000515675 ABCA5Q8WWZ7 1642 aa0.2□□□□□ -2.38
AFP-207ENST00000515675 HECTD1Q9ULT8 2610 aa0.2□□□□□ -2.38
AFP-207ENST00000515675 USP9XQ93008 2570 aaPredicted RBP0.2□□□□□ -2.38
AFP-207ENST00000515675 MYO9AB2RTY4 2548 aa0.2□□□□□ -2.38
AFP-207ENST00000515675 ACACBO00763 2458 aa0.2□□□□□ -2.38
AFP-207ENST00000515675 PRRC2CQ9Y520 2896 aaKnown RBP0.2□□□□□ -2.38
AFP-207ENST00000515675 STAB1Q9NY15 2570 aa0.2□□□□□ -2.38
AFP-207ENST00000515675 ANKHD1Q8IWZ3 2542 aaKnown RBP0.2□□□□□ -2.38
AFP-207ENST00000515675 TLN2Q9Y4G6 2542 aa0.2□□□□□ -2.38
AFP-207ENST00000515675 GPR98Q8WXG9 6306 aa0.2□□□□□ -2.38
AFP-207ENST00000515675 COL6A5A8TX70 2615 aa0.19□□□□□ -2.38
AFP-207ENST00000515675 HECTD4Q9Y4D8 3996 aa0.19□□□□□ -2.38
AFP-207ENST00000515675 HSPG2P98160 4391 aa0.19□□□□□ -2.38
AFP-207ENST00000515675 SPRR2BP35325 72 aa0.19□□□□□ -2.38
AFP-207ENST00000515675 SETXQ7Z333 2677 aaKnown RBP0.19□□□□□ -2.38
AFP-207ENST00000515675 SYNE2Q8WXH0 6885 aaKnown RBP0.18□□□□□ -2.38
AFP-207ENST00000515675 MGAM2Q2M2H8 2515 aa0.18□□□□□ -2.38
AFP-207ENST00000515675 SMIM27A0A1W2PRY6 76 aa0.18□□□□□ -2.38
AFP-207ENST00000515675 TNRC18O15417 2968 aaPredicted RBP0.18□□□□□ -2.38
AFP-207ENST00000515675 TLN1Q9Y490 2541 aaKnown RBP0.18□□□□□ -2.38
AFP-207ENST00000515675 LRP1BQ9NZR2 4599 aa0.17□□□□□ -2.38
AFP-207ENST00000515675 VPS13BQ7Z7G8 4022 aa0.17□□□□□ -2.38
AFP-207ENST00000515675 FLNBO75369 2602 aaKnown RBP0.17□□□□□ -2.38
AFP-207ENST00000515675 FLNCQ14315 2725 aa0.16□□□□□ -2.38
AFP-207ENST00000515675 ITPR3Q14573 2671 aa0.16□□□□□ -2.38
AFP-207ENST00000515675 GCN1Q92616 2671 aaKnown RBP0.16□□□□□ -2.38
AFP-207ENST00000515675 CUBNO60494 3623 aa0.16□□□□□ -2.38
AFP-207ENST00000515675 TEP1Q99973 2627 aaKnown RBP0.16□□□□□ -2.38
AFP-207ENST00000515675 CEP295Q9C0D2 2601 aa0.16□□□□□ -2.38
AFP-207ENST00000515675 IQGAP1P46940 1657 aa0.16□□□□□ -2.38
AFP-207ENST00000515675 LMO7Q8WWI1 1683 aa0.16□□□□□ -2.38
AFP-207ENST00000515675 ANKRD11Q6UB99 2663 aaPredicted RBP0.16□□□□□ -2.38
AFP-207ENST00000515675 NBEAL1Q6ZS30 2694 aa0.16□□□□□ -2.38
AFP-207ENST00000515675 KIF21BO75037 1637 aa0.16□□□□□ -2.38
AFP-207ENST00000515675 FSIP2Q5CZC0 6907 aa0.16□□□□□ -2.38
AFP-207ENST00000515675 UTP20O75691 2785 aaKnown RBP0.16□□□□□ -2.38
AFP-207ENST00000515675 H3BUA1 57 aa0.15□□□□□ -2.39
AFP-207ENST00000515675 HIVEP1P15822 2718 aa0.15□□□□□ -2.39
AFP-207ENST00000515675 NBEAL2Q6ZNJ1 2754 aa0.14□□□□□ -2.39
AFP-207ENST00000515675 PKD1P98161 4303 aa0.14□□□□□ -2.39
AFP-207ENST00000515675 DDX60Q8IY21 1712 aaKnown RBP0.14□□□□□ -2.39
AFP-207ENST00000515675 MACF1Q9UPN3 7388 aaKnown RBP0.14□□□□□ -2.39
AFP-207ENST00000515675 IGLV5-48A0A075B6I7 105 aa0.14□□□□□ -2.39
AFP-207ENST00000515675 ABRACLQ9P1F3 81 aa0.14□□□□□ -2.39
AFP-207ENST00000515675 SACSQ9NZJ4 4579 aa0.14□□□□□ -2.39
AFP-207ENST00000515675 NFAT5O94916 1531 aa0.13□□□□□ -2.39
AFP-207ENST00000515675 NEBP20929 6669 aa0.13□□□□□ -2.39
AFP-207ENST00000515675 TENM2Q9NT68 2774 aa0.13□□□□□ -2.39
AFP-207ENST00000515675 SRRM2Q9UQ35 2752 aaKnown RBP0.13□□□□□ -2.39
AFP-207ENST00000515675 CENPEQ02224 2701 aa0.13□□□□□ -2.39
AFP-207ENST00000515675 CFAP46Q8IYW2 2715 aa0.13□□□□□ -2.39
AFP-207ENST00000515675 SPRR2GQ9BYE4 73 aa0.13□□□□□ -2.39
AFP-207ENST00000515675 ITPR1Q14643 2758 aa0.13□□□□□ -2.39
AFP-207ENST00000515675 TEX15Q9BXT5 2789 aa0.13□□□□□ -2.39
AFP-207ENST00000515675 AKAP9Q99996 3911 aa0.12□□□□□ -2.39
AFP-207ENST00000515675 NBPF19A0A087WUL8 3843 aa0.12□□□□□ -2.39
AFP-207ENST00000515675 COL7A1Q02388 2944 aa0.12□□□□□ -2.39
AFP-207ENST00000515675 ZANQ9Y493 2812 aa0.12□□□□□ -2.39
AFP-207ENST00000515675 ITPR2Q14571 2701 aa0.12□□□□□ -2.39
AFP-207ENST00000515675 PKHD1L1Q86WI1 4243 aa0.12□□□□□ -2.39
AFP-207ENST00000515675 H3BNG1 76 aa0.12□□□□□ -2.39
AFP-207ENST00000515675 TFF3Q07654 80 aa0.12□□□□□ -2.39
AFP-207ENST00000515675 KRTAP6-2Q3LI66 62 aa0.12□□□□□ -2.39
AFP-207ENST00000515675 NF1P21359 2839 aa0.12□□□□□ -2.39
AFP-207ENST00000515675 LRP2P98164 4655 aa0.12□□□□□ -2.39
AFP-207ENST00000515675 TRRAPQ9Y4A5 3859 aa0.12□□□□□ -2.39
AFP-207ENST00000515675 TGP01266 2768 aa0.11□□□□□ -2.39
AFP-207ENST00000515675 IQGAP2Q13576 1575 aa0.11□□□□□ -2.39
AFP-207ENST00000515675 DCHS2Q6V1P9 2916 aa0.11□□□□□ -2.39
AFP-207ENST00000515675 MXRA5Q9NR99 2828 aa0.11□□□□□ -2.39
AFP-207ENST00000515675 DNAH3Q8TD57 4116 aa0.11□□□□□ -2.39
AFP-207ENST00000515675 DNAH9Q9NYC9 4486 aa0.11□□□□□ -2.39
AFP-207ENST00000515675 ANK3Q12955 4377 aaKnown RBP0.11□□□□□ -2.39
AFP-207ENST00000515675 C9orf92A6NGG3 77 aa0.11□□□□□ -2.39
AFP-207ENST00000515675 SPRR2AP35326 72 aa0.11□□□□□ -2.39
AFP-207ENST00000515675 TIMM8BQ9Y5J9 83 aaPredicted RBP0.11□□□□□ -2.39
AFP-207ENST00000515675 PKHD1P08F94 4074 aa0.11□□□□□ -2.39
AFP-207ENST00000515675 CMYA5Q8N3K9 4069 aa0.11□□□□□ -2.39
AFP-207ENST00000515675 DSTQ03001 7570 aaKnown RBP0.11□□□□□ -2.39
AFP-207ENST00000515675 FAT3Q8TDW7 4589 aa0.11□□□□□ -2.39
AFP-207ENST00000515675 MAP1AP78559 2803 aaPredicted RBP0.11□□□□□ -2.39
AFP-207ENST00000515675 SVEP1Q4LDE5 3571 aa0.11□□□□□ -2.39
AFP-207ENST00000515675 FAM208AQ9UK61 1670 aaKnown RBP0.11□□□□□ -2.39
AFP-207ENST00000515675 LRBAP50851 2863 aa0.11□□□□□ -2.39
AFP-207ENST00000515675 APOBP04114 4563 aaKnown RBP0.11□□□□□ -2.39
AFP-207ENST00000515675 HYDINQ4G0P3 5121 aa0.1□□□□□ -2.39
AFP-207ENST00000515675 COL6A3P12111 3177 aa0.1□□□□□ -2.39
AFP-207ENST00000515675 SPENQ96T58 3664 aaKnown RBP0.1□□□□□ -2.39
AFP-207ENST00000515675 WDR87Q6ZQQ6 2873 aa0.1□□□□□ -2.39
AFP-207ENST00000515675 TOMM5Q8N4H5 51 aa0.1□□□□□ -2.39
AFP-207ENST00000515675 KAAG1Q9UBP8 84 aa0.1□□□□□ -2.39
AFP-207ENST00000515675 DNAH11Q96DT5 4516 aa0.1□□□□□ -2.39
AFP-207ENST00000515675 FLGP20930 4061 aaPredicted RBP0.09□□□□□ -2.39
AFP-207ENST00000515675 HERC1Q15751 4861 aa0.09□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms