RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 IGHV6-1A0A0B4J1U7 121 aa5.4□□□□□ -1.54
SMAD1-216ENST00000515527 TRAV12-1A0A0B4J245 112 aa5.4□□□□□ -1.54
SMAD1-216ENST00000515527 KRTAP9-9Q9BYP9 154 aa5.4□□□□□ -1.54
SMAD1-216ENST00000515527 KRTAP9-4Q9BYQ2 154 aa5.4□□□□□ -1.54
SMAD1-216ENST00000515527 HIST1H2BKO60814 126 aa5.39□□□□□ -1.55
SMAD1-216ENST00000515527 HIST1H2BJP06899 126 aa5.39□□□□□ -1.55
SMAD1-216ENST00000515527 HIST1H2BOP23527 126 aa5.39□□□□□ -1.55
SMAD1-216ENST00000515527 HIST1H2BBP33778 126 aa5.39□□□□□ -1.55
SMAD1-216ENST00000515527 HIST1H2BDP58876 126 aa5.39□□□□□ -1.55
SMAD1-216ENST00000515527 HIST1H2BCP62807 126 aa5.39□□□□□ -1.55
SMAD1-216ENST00000515527 HIST2H2BEQ16778 126 aa5.39□□□□□ -1.55
SMAD1-216ENST00000515527 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.39□□□□□ -1.55
SMAD1-216ENST00000515527 GTF2H5Q6ZYL4 71 aa5.39□□□□□ -1.55
SMAD1-216ENST00000515527 HIST1H2BHQ93079 126 aa5.39□□□□□ -1.55
SMAD1-216ENST00000515527 HIST1H2BNQ99877 126 aa5.39□□□□□ -1.55
SMAD1-216ENST00000515527 HIST1H2BMQ99879 126 aa5.39□□□□□ -1.55
SMAD1-216ENST00000515527 C3orf79P0CE67 100 aa5.38□□□□□ -1.55
SMAD1-216ENST00000515527 TEN1Q86WV5 123 aa5.38□□□□□ -1.55
SMAD1-216ENST00000515527 UQCR10Q9UDW1 63 aa5.38□□□□□ -1.55
SMAD1-216ENST00000515527 BATFQ16520 125 aa5.37□□□□□ -1.55
SMAD1-216ENST00000515527 Q6ZQY7 126 aa5.37□□□□□ -1.55
SMAD1-216ENST00000515527 YPEL4Q96NS1 127 aa5.37□□□□□ -1.55
SMAD1-216ENST00000515527 HSPB8Q9UJY1 196 aa5.36□□□□□ -1.55
SMAD1-216ENST00000515527 VAMP8Q9BV40 100 aa5.35□□□□□ -1.55
SMAD1-216ENST00000515527 LCA10Q71F78 164 aa5.34□□□□□ -1.55
SMAD1-216ENST00000515527 SMIM20Q8N5G0 67 aa5.34□□□□□ -1.55
SMAD1-216ENST00000515527 URB1-AS1Q96HZ7 61 aa5.34□□□□□ -1.55
SMAD1-216ENST00000515527 AHNAKQ09666 5890 aaKnown RBP5.33□□□□□ -1.56
SMAD1-216ENST00000515527 HSD52Q0P140 79 aa5.33□□□□□ -1.56
SMAD1-216ENST00000515527 PRR15Q8IV56 129 aa5.33□□□□□ -1.56
SMAD1-216ENST00000515527 SEC61GP60059 68 aa5.32□□□□□ -1.56
SMAD1-216ENST00000515527 LYRM7Q5U5X0 104 aa5.32□□□□□ -1.56
SMAD1-216ENST00000515527 IFI27L1Q96BM0 104 aa5.32□□□□□ -1.56
SMAD1-216ENST00000515527 TRGC2P03986 189 aa5.31□□□□□ -1.56
SMAD1-216ENST00000515527 A6NDN8 102 aa5.3□□□□□ -1.56
SMAD1-216ENST00000515527 LINC00310P59036 64 aa5.3□□□□□ -1.56
SMAD1-216ENST00000515527 DSCR8Q96T75 97 aa5.3□□□□□ -1.56
SMAD1-216ENST00000515527 SERF1AO75920 110 aa5.29□□□□□ -1.56
SMAD1-216ENST00000515527 HERVK_113P61574 105 aa5.29□□□□□ -1.56
SMAD1-216ENST00000515527 DEFB116Q30KQ4 102 aa5.29□□□□□ -1.56
SMAD1-216ENST00000515527 KRTAP19-4Q3LI73 84 aa5.28□□□□□ -1.56
SMAD1-216ENST00000515527 ANAPC13Q9BS18 74 aa5.28□□□□□ -1.56
SMAD1-216ENST00000515527 hADV29S1A0JD25 119 aa5.27□□□□□ -1.57
SMAD1-216ENST00000515527 LITAFQ99732 161 aa5.27□□□□□ -1.57
SMAD1-216ENST00000515527 C8orf87E5RJ46 101 aa5.26□□□□□ -1.57
SMAD1-216ENST00000515527 LCE5AQ5TCM9 118 aa5.26□□□□□ -1.57
SMAD1-216ENST00000515527 CSAG1Q6PB30 78 aa5.26□□□□□ -1.57
SMAD1-216ENST00000515527 LINC00575Q6W349 94 aa5.26□□□□□ -1.57
SMAD1-216ENST00000515527 CRIPTQ9P021 101 aa5.26□□□□□ -1.57
SMAD1-216ENST00000515527 RPS28P62857 69 aaKnown RBP5.25□□□□□ -1.57
SMAD1-216ENST00000515527 IGKV3D-7A0A0C4DH55 119 aa5.24□□□□□ -1.57
SMAD1-216ENST00000515527 HSBP1O75506 76 aa5.24□□□□□ -1.57
SMAD1-216ENST00000515527 C18orf32Q8TCD1 76 aa5.24□□□□□ -1.57
SMAD1-216ENST00000515527 PAM16Q9Y3D7 125 aa5.24□□□□□ -1.57
SMAD1-216ENST00000515527 SPATA45Q537H7 98 aa5.23□□□□□ -1.57
SMAD1-216ENST00000515527 SMIM11BQ8TCY0 68 aa5.23□□□□□ -1.57
SMAD1-216ENST00000515527 V9GYY9 64 aa5.23□□□□□ -1.57
SMAD1-216ENST00000515527 A0A1B0GX51 115 aa5.22□□□□□ -1.57
SMAD1-216ENST00000515527 TAX1BP3O14907 124 aa5.22□□□□□ -1.57
SMAD1-216ENST00000515527 PPDPFLQ8WWR9 84 aa5.22□□□□□ -1.57
SMAD1-216ENST00000515527 J3KT08 172 aa5.21□□□□□ -1.58
SMAD1-216ENST00000515527 K7EP34 96 aa5.21□□□□□ -1.58
SMAD1-216ENST00000515527 KRTAP10-7P60409 375 aaPredicted RBP5.21□□□□□ -1.58
SMAD1-216ENST00000515527 PMCHL2Q9BQD1 86 aa5.21□□□□□ -1.58
SMAD1-216ENST00000515527 A0A1B0GVX0 72 aa5.2□□□□□ -1.58
SMAD1-216ENST00000515527 F8W1H4 67 aa5.2□□□□□ -1.58
SMAD1-216ENST00000515527 TIMM17BO60830 172 aa5.2□□□□□ -1.58
SMAD1-216ENST00000515527 PLNP26678 52 aa5.19□□□□□ -1.58
SMAD1-216ENST00000515527 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.19□□□□□ -1.58
SMAD1-216ENST00000515527 PLAC4Q8WY50 150 aa5.19□□□□□ -1.58
SMAD1-216ENST00000515527 C9orf118A6NHY6 69 aa5.18□□□□□ -1.58
SMAD1-216ENST00000515527 PRO0628Q9UI54 55 aa5.18□□□□□ -1.58
SMAD1-216ENST00000515527 RAB37Q96AX2 223 aa5.17□□□□□ -1.58
SMAD1-216ENST00000515527 MUC5ACP98088 5654 aa5.16□□□□□ -1.58
SMAD1-216ENST00000515527 KRTAP10-12P60413 245 aa5.16□□□□□ -1.58
SMAD1-216ENST00000515527 S4R3F8 94 aa5.16□□□□□ -1.58
SMAD1-216ENST00000515527 FABP2P12104 132 aa5.15□□□□□ -1.59
SMAD1-216ENST00000515527 BVES-AS1Q5T3Y7 98 aa5.15□□□□□ -1.59
SMAD1-216ENST00000515527 KRTAP5-4Q6L8H1 288 aa5.15□□□□□ -1.59
SMAD1-216ENST00000515527 LINC00472Q9H8W2 130 aa5.15□□□□□ -1.59
SMAD1-216ENST00000515527 C9JAW5 83 aa5.13□□□□□ -1.59
SMAD1-216ENST00000515527 DPM2O94777 84 aa5.13□□□□□ -1.59
SMAD1-216ENST00000515527 IFITM1P13164 125 aa5.13□□□□□ -1.59
SMAD1-216ENST00000515527 CYSTM1Q9H1C7 97 aa5.13□□□□□ -1.59
SMAD1-216ENST00000515527 TRAPPC1Q9Y5R8 145 aa5.12□□□□□ -1.59
SMAD1-216ENST00000515527 SPCS1Q9Y6A9 102 aa5.12□□□□□ -1.59
SMAD1-216ENST00000515527 NDUFV3P56181 108 aaKnown RBP5.11□□□□□ -1.59
SMAD1-216ENST00000515527 KRTAP19-3Q7Z4W3 81 aa5.11□□□□□ -1.59
SMAD1-216ENST00000515527 KRTAP4-7Q9BYR0 210 aa5.11□□□□□ -1.59
SMAD1-216ENST00000515527 A0A1W2PPM0 123 aa5.1□□□□□ -1.59
SMAD1-216ENST00000515527 IGKCP01834 107 aa5.1□□□□□ -1.59
SMAD1-216ENST00000515527 KRTDAPP60985 99 aa5.1□□□□□ -1.59
SMAD1-216ENST00000515527 MUC5BQ9HC84 5762 aaPredicted RBP5.1□□□□□ -1.59
SMAD1-216ENST00000515527 E9PLD3 99 aa5.09□□□□□ -1.59
SMAD1-216ENST00000515527 C4orf26Q17RF5 130 aa5.09□□□□□ -1.59
SMAD1-216ENST00000515527 IGKV2D-30A0A075B6S6 120 aa5.08□□□□□ -1.6
SMAD1-216ENST00000515527 IGKV2-30P06310 120 aa5.08□□□□□ -1.6
SMAD1-216ENST00000515527 H3BMG7 143 aa5.07□□□□□ -1.6
SMAD1-216ENST00000515527 PDE6GP18545 87 aa5.07□□□□□ -1.6
SMAD1-216ENST00000515527 COPS9Q8WXC6 57 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms