RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 RNF213Q63HN8 5207 aa6.65□□□□□ -1.34
PDLIM5-220ENST00000514830 Q6ZVQ6 151 aa6.65□□□□□ -1.34
PDLIM5-220ENST00000514830 UBL5Q9BZL1 73 aa6.65□□□□□ -1.34
PDLIM5-220ENST00000514830 IGKV4-1P06312 121 aa6.64□□□□□ -1.35
PDLIM5-220ENST00000514830 KRTAP13-3Q3SY46 172 aa6.64□□□□□ -1.35
PDLIM5-220ENST00000514830 A0A0U1RQV1 116 aa6.63□□□□□ -1.35
PDLIM5-220ENST00000514830 J3QR89 54 aa6.63□□□□□ -1.35
PDLIM5-220ENST00000514830 SIGMAR1Q99720 223 aa6.61□□□□□ -1.35
PDLIM5-220ENST00000514830 A8MWP4 228 aa6.6□□□□□ -1.35
PDLIM5-220ENST00000514830 DEFB116Q30KQ4 102 aa6.6□□□□□ -1.35
PDLIM5-220ENST00000514830 A0A1B0GVX0 72 aa6.59□□□□□ -1.35
PDLIM5-220ENST00000514830 BPY2O14599 106 aa6.59□□□□□ -1.35
PDLIM5-220ENST00000514830 NDUFB1O75438 58 aa6.58□□□□□ -1.36
PDLIM5-220ENST00000514830 DSCR10P59022 87 aa6.58□□□□□ -1.36
PDLIM5-220ENST00000514830 C8orf87E5RJ46 101 aa6.57□□□□□ -1.36
PDLIM5-220ENST00000514830 CXCL6P80162 114 aa6.57□□□□□ -1.36
PDLIM5-220ENST00000514830 IGKV3D-7A0A0C4DH55 119 aa6.56□□□□□ -1.36
PDLIM5-220ENST00000514830 K7ERU9 68 aa6.56□□□□□ -1.36
PDLIM5-220ENST00000514830 PRR15Q8IV56 129 aa6.56□□□□□ -1.36
PDLIM5-220ENST00000514830 ATP5EP2Q5VTU8 51 aa6.55□□□□□ -1.36
PDLIM5-220ENST00000514830 LINC00313P59037 77 aa6.54□□□□□ -1.36
PDLIM5-220ENST00000514830 CDIP1Q9H305 208 aa6.54□□□□□ -1.36
PDLIM5-220ENST00000514830 IGHV6-1A0A0B4J1U7 121 aa6.53□□□□□ -1.36
PDLIM5-220ENST00000514830 LINC00643Q86TS7 51 aa6.53□□□□□ -1.36
PDLIM5-220ENST00000514830 C9orf92A6NGG3 77 aa6.52□□□□□ -1.37
PDLIM5-220ENST00000514830 KRTAP16-1A8MUX0 517 aa6.52□□□□□ -1.37
PDLIM5-220ENST00000514830 K7EQZ3 153 aa6.52□□□□□ -1.37
PDLIM5-220ENST00000514830 LPAP08519 4548 aa6.52□□□□□ -1.37
PDLIM5-220ENST00000514830 KRTAP4-8Q9BYQ9 185 aa6.51□□□□□ -1.37
PDLIM5-220ENST00000514830 NOTCH2NLQ7Z3S9 236 aa6.5□□□□□ -1.37
PDLIM5-220ENST00000514830 C8orf17Q9NRJ1 99 aa6.5□□□□□ -1.37
PDLIM5-220ENST00000514830 C20orf166-AS1Q96NR2 134 aa6.49□□□□□ -1.37
PDLIM5-220ENST00000514830 MMP24-AS1A0A0U1RRL7 71 aa6.48□□□□□ -1.37
PDLIM5-220ENST00000514830 Q75L30 129 aa6.48□□□□□ -1.37
PDLIM5-220ENST00000514830 A8MUU9 505 aa6.47□□□□□ -1.37
PDLIM5-220ENST00000514830 RPL37P61927 97 aaKnown RBP6.46□□□□□ -1.38
PDLIM5-220ENST00000514830 Q8N9L7 120 aa6.46□□□□□ -1.38
PDLIM5-220ENST00000514830 Q8N9P0 234 aaPredicted RBP6.45□□□□□ -1.38
PDLIM5-220ENST00000514830 TMEM254Q8TBM7 123 aa6.45□□□□□ -1.38
PDLIM5-220ENST00000514830 hDV103S1A0JD37 113 aa6.44□□□□□ -1.38
PDLIM5-220ENST00000514830 KRTAP9-2Q9BYQ4 174 aa6.44□□□□□ -1.38
PDLIM5-220ENST00000514830 SEC61BP60468 96 aaKnown RBP6.43□□□□□ -1.38
PDLIM5-220ENST00000514830 HCG22E2RYF7 251 aa6.42□□□□□ -1.38
PDLIM5-220ENST00000514830 MRPL34Q9BQ48 92 aaKnown RBP6.42□□□□□ -1.38
PDLIM5-220ENST00000514830 CASC2Q6XLA1 102 aa6.41□□□□□ -1.38
PDLIM5-220ENST00000514830 IMUPQ9GZP8 106 aa6.39□□□□□ -1.39
PDLIM5-220ENST00000514830 MUC17Q685J3 4493 aa6.38□□□□□ -1.39
PDLIM5-220ENST00000514830 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.37□□□□□ -1.39
PDLIM5-220ENST00000514830 HIST1H4AP62805 103 aaKnown RBP6.37□□□□□ -1.39
PDLIM5-220ENST00000514830 ATP11AUNQ6ZP68 121 aa6.37□□□□□ -1.39
PDLIM5-220ENST00000514830 WFDC13Q8IUB5 93 aa6.37□□□□□ -1.39
PDLIM5-220ENST00000514830 KRTAP9-6A0A140TA67 174 aa6.35□□□□□ -1.39
PDLIM5-220ENST00000514830 PCOTHQ58A44 107 aa6.35□□□□□ -1.39
PDLIM5-220ENST00000514830 MT-ATP8P03928 68 aa6.33□□□□□ -1.4
PDLIM5-220ENST00000514830 ZCCHC13Q8WW36 166 aaKnown RBP6.33□□□□□ -1.4
PDLIM5-220ENST00000514830 A0A087WVE0 104 aa6.32□□□□□ -1.4
PDLIM5-220ENST00000514830 TP53AIP1Q9HCN2 124 aa6.32□□□□□ -1.4
PDLIM5-220ENST00000514830 NDUFS5O43920 106 aa6.29□□□□□ -1.4
PDLIM5-220ENST00000514830 MUC2Q02817 5179 aa6.28□□□□□ -1.4
PDLIM5-220ENST00000514830 KRTAP4-1Q9BYQ7 146 aa6.26□□□□□ -1.41
PDLIM5-220ENST00000514830 Q5W150 140 aa6.25□□□□□ -1.41
PDLIM5-220ENST00000514830 UQCRQO14949 82 aa6.23□□□□□ -1.41
PDLIM5-220ENST00000514830 OCR1Q9BZK8 76 aa6.23□□□□□ -1.41
PDLIM5-220ENST00000514830 FAT4Q6V0I7 4981 aa6.21□□□□□ -1.41
PDLIM5-220ENST00000514830 LCE3BQ5TA77 95 aa6.21□□□□□ -1.42
PDLIM5-220ENST00000514830 KRTAP4-12Q9BQ66 201 aa6.2□□□□□ -1.42
PDLIM5-220ENST00000514830 TRAV22A0A0B4J277 110 aa6.19□□□□□ -1.42
PDLIM5-220ENST00000514830 FAM236AA0A1B0GUQ0 79 aa6.19□□□□□ -1.42
PDLIM5-220ENST00000514830 FAM236BA0A1B0GV22 79 aa6.19□□□□□ -1.42
PDLIM5-220ENST00000514830 SPINK7P58062 85 aa6.19□□□□□ -1.42
PDLIM5-220ENST00000514830 SMIM20Q8N5G0 67 aa6.19□□□□□ -1.42
PDLIM5-220ENST00000514830 SCGB1A1P11684 91 aa6.18□□□□□ -1.42
PDLIM5-220ENST00000514830 ATOX1O00244 68 aa6.17□□□□□ -1.42
PDLIM5-220ENST00000514830 C7orf65Q6ZTY9 151 aa6.16□□□□□ -1.42
PDLIM5-220ENST00000514830 IGKV2-30P06310 120 aa6.15□□□□□ -1.42
PDLIM5-220ENST00000514830 C5orf47Q569G3 176 aa6.15□□□□□ -1.42
PDLIM5-220ENST00000514830 MPLKIPQ8TAP9 179 aa6.15□□□□□ -1.42
PDLIM5-220ENST00000514830 HRES1P13985 223 aa6.14□□□□□ -1.43
PDLIM5-220ENST00000514830 TRAV7A0A075B6U4 112 aa6.13□□□□□ -1.43
PDLIM5-220ENST00000514830 LOC101927531A0A1B0GV80 90 aa6.13□□□□□ -1.43
PDLIM5-220ENST00000514830 H0Y9P7 68 aa6.13□□□□□ -1.43
PDLIM5-220ENST00000514830 H3BPC8 53 aa6.12□□□□□ -1.43
PDLIM5-220ENST00000514830 KRTAP19-2Q3LHN2 52 aa6.12□□□□□ -1.43
PDLIM5-220ENST00000514830 IGKV2D-30A0A075B6S6 120 aa6.11□□□□□ -1.43
PDLIM5-220ENST00000514830 MP68P56378 58 aa6.11□□□□□ -1.43
PDLIM5-220ENST00000514830 CYP4F30PQ9H0H9 118 aa6.1□□□□□ -1.43
PDLIM5-220ENST00000514830 SERP2Q8N6R1 65 aa6.07□□□□□ -1.44
PDLIM5-220ENST00000514830 C1orf64Q8NEQ6 169 aa6.07□□□□□ -1.44
PDLIM5-220ENST00000514830 RBM12B-AS1Q9P1G2 102 aa6.07□□□□□ -1.44
PDLIM5-220ENST00000514830 CRCT1Q9UGL9 99 aa6.07□□□□□ -1.44
PDLIM5-220ENST00000514830 LINC00208Q96KT6 92 aa6.06□□□□□ -1.44
PDLIM5-220ENST00000514830 KRTAP9-9Q9BYP9 154 aa6.06□□□□□ -1.44
PDLIM5-220ENST00000514830 KRTAP9-4Q9BYQ2 154 aa6.06□□□□□ -1.44
PDLIM5-220ENST00000514830 KRTAP19-1Q8IUB9 90 aa6.04□□□□□ -1.44
PDLIM5-220ENST00000514830 COX6B2Q6YFQ2 88 aa6.01□□□□□ -1.45
PDLIM5-220ENST00000514830 KRTAP4-8A0A0G2JLE6 195 aa6□□□□□ -1.45
PDLIM5-220ENST00000514830 FLGP20930 4061 aaPredicted RBP5.99□□□□□ -1.45
PDLIM5-220ENST00000514830 FAM236DA0A1B0GTK5 79 aa5.98□□□□□ -1.45
PDLIM5-220ENST00000514830 FAM236CP0DP71 79 aa5.98□□□□□ -1.45
PDLIM5-220ENST00000514830 COX7CP15954 63 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms