RNA–Protein interactions for RNA: ENST00000513557.5

GYPB-214, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 277 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-214ENST00000513557 ATP5EP56381 51 aaPredicted RBP1.84□□□□□ -2.11
GYPB-214ENST00000513557 KRTAP10-4P60372 401 aaPredicted RBP1.84□□□□□ -2.11
GYPB-214ENST00000513557 COL5A1-AS1Q5SY13 56 aa1.84□□□□□ -2.11
GYPB-214ENST00000513557 ALKAL2Q6UX46 152 aa1.84□□□□□ -2.11
GYPB-214ENST00000513557 C5orf38Q86SI9 138 aa1.84□□□□□ -2.11
GYPB-214ENST00000513557 ST20Q9HBF5 79 aa1.84□□□□□ -2.11
GYPB-214ENST00000513557 LINC00959A0A1B0GUT2 108 aa1.83□□□□□ -2.12
GYPB-214ENST00000513557 ADIRFQ15847 76 aa1.83□□□□□ -2.12
GYPB-214ENST00000513557 C9orf62Q8N4C0 152 aa1.83□□□□□ -2.12
GYPB-214ENST00000513557 DMAC1Q96GE9 116 aa1.83□□□□□ -2.12
GYPB-214ENST00000513557 CDC42SE1Q9NRR8 79 aa1.83□□□□□ -2.12
GYPB-214ENST00000513557 C22orf24Q9Y442 160 aa1.83□□□□□ -2.12
GYPB-214ENST00000513557 A0A1B0GUT8 65 aa1.82□□□□□ -2.12
GYPB-214ENST00000513557 C7orf77A4D0Y5 90 aa1.82□□□□□ -2.12
GYPB-214ENST00000513557 HIGD1CA8MV81 97 aa1.82□□□□□ -2.12
GYPB-214ENST00000513557 JMJD7-PLA2G4BH0Y9G9 81 aa1.82□□□□□ -2.12
GYPB-214ENST00000513557 MT1HL1P0DM35 61 aa1.82□□□□□ -2.12
GYPB-214ENST00000513557 SPAG11BQ08648 103 aa1.82□□□□□ -2.12
GYPB-214ENST00000513557 Q8N8P6 123 aa1.82□□□□□ -2.12
GYPB-214ENST00000513557 PLAC8Q9NZF1 115 aa1.82□□□□□ -2.12
GYPB-214ENST00000513557 TOMM7Q9P0U1 55 aa1.82□□□□□ -2.12
GYPB-214ENST00000513557 SNURFQ9Y675 71 aa1.82□□□□□ -2.12
GYPB-214ENST00000513557 UBR4Q5T4S7 5183 aa1.82□□□□□ -2.12
GYPB-214ENST00000513557 DNAH8Q96JB1 4490 aa1.81□□□□□ -2.12
GYPB-214ENST00000513557 GVQW2A0A096LPI5 108 aaPredicted RBP1.81□□□□□ -2.12
GYPB-214ENST00000513557 INE1O15225 51 aa1.81□□□□□ -2.12
GYPB-214ENST00000513557 RPL39P62891 51 aaKnown RBP1.81□□□□□ -2.12
GYPB-214ENST00000513557 C9orf116Q5BN46 136 aaPredicted RBP1.81□□□□□ -2.12
GYPB-214ENST00000513557 ZCCHC13Q8WW36 166 aaKnown RBP1.81□□□□□ -2.12
GYPB-214ENST00000513557 LINC00474Q9P2X8 69 aa1.81□□□□□ -2.12
GYPB-214ENST00000513557 TRBV10-3A0A0K0K1G6 114 aa1.8□□□□□ -2.12
GYPB-214ENST00000513557 D6R8Y8 96 aa1.8□□□□□ -2.12
GYPB-214ENST00000513557 IGKCP01834 107 aa1.8□□□□□ -2.12
GYPB-214ENST00000513557 PDE6GP18545 87 aa1.8□□□□□ -2.12
GYPB-214ENST00000513557 UBE2D1P51668 147 aa1.8□□□□□ -2.12
GYPB-214ENST00000513557 SPINK6Q6UWN8 80 aa1.8□□□□□ -2.12
GYPB-214ENST00000513557 UNQ6190/PRO20217Q6UXQ8 127 aa1.8□□□□□ -2.12
GYPB-214ENST00000513557 LINC01600Q96MT4 127 aa1.8□□□□□ -2.12
GYPB-214ENST00000513557 DSCR8Q96T75 97 aa1.8□□□□□ -2.12
GYPB-214ENST00000513557 CDC42SE2Q9NRR3 84 aa1.8□□□□□ -2.12
GYPB-214ENST00000513557 FAT3Q8TDW7 4589 aa1.79□□□□□ -2.12
GYPB-214ENST00000513557 NDUFA1O15239 70 aa1.79□□□□□ -2.12
GYPB-214ENST00000513557 POLR2KP53803 58 aaKnown RBP1.79□□□□□ -2.12
GYPB-214ENST00000513557 CSAG1Q6PB30 78 aa1.79□□□□□ -2.12
GYPB-214ENST00000513557 SNHG12Q9BXW3 62 aa1.79□□□□□ -2.12
GYPB-214ENST00000513557 UBE2D4Q9Y2X8 147 aa1.79□□□□□ -2.12
GYPB-214ENST00000513557 V9GYV3 84 aa1.79□□□□□ -2.12
GYPB-214ENST00000513557 PPP1R17O96001 155 aa1.78□□□□□ -2.12
GYPB-214ENST00000513557 IFI27P40305 119 aaPredicted RBP1.78□□□□□ -2.12
GYPB-214ENST00000513557 PEA15Q15121 130 aa1.78□□□□□ -2.12
GYPB-214ENST00000513557 S100A7L2Q5SY68 101 aa1.78□□□□□ -2.12
GYPB-214ENST00000513557 SMIM2Q9BVW6 85 aa1.78□□□□□ -2.12
GYPB-214ENST00000513557 CNFNQ9BYD5 112 aa1.78□□□□□ -2.12
GYPB-214ENST00000513557 MRPL35Q9NZE8 188 aaKnown RBP1.78□□□□□ -2.12
GYPB-214ENST00000513557 C6orf48Q9UBA6 75 aa1.78□□□□□ -2.12
GYPB-214ENST00000513557 HMCN2Q8NDA2 5059 aa1.77□□□□□ -2.13
GYPB-214ENST00000513557 LOC110117498A0A087WWA1 95 aa1.77□□□□□ -2.13
GYPB-214ENST00000513557 DNAL4O96015 105 aa1.77□□□□□ -2.13
GYPB-214ENST00000513557 RBM3P98179 157 aaKnown RBP1.77□□□□□ -2.13
GYPB-214ENST00000513557 KRTAP6-3Q3LI67 103 aa1.77□□□□□ -2.13
GYPB-214ENST00000513557 SPATA45Q537H7 98 aa1.77□□□□□ -2.13
GYPB-214ENST00000513557 LIMD2Q9BT23 127 aa1.77□□□□□ -2.13
GYPB-214ENST00000513557 LRP2P98164 4655 aa1.76□□□□□ -2.13
GYPB-214ENST00000513557 TEX49A0A1B0GTD5 131 aa1.76□□□□□ -2.13
GYPB-214ENST00000513557 SMIM27A0A1W2PRY6 76 aa1.76□□□□□ -2.13
GYPB-214ENST00000513557 CCKP06307 115 aa1.76□□□□□ -2.13
GYPB-214ENST00000513557 KRTAP13-1Q8IUC0 172 aa1.76□□□□□ -2.13
GYPB-214ENST00000513557 IFI27L1Q96BM0 104 aa1.76□□□□□ -2.13
GYPB-214ENST00000513557 C20orf78Q9BR46 151 aa1.76□□□□□ -2.13
GYPB-214ENST00000513557 CYSTM1Q9H1C7 97 aa1.76□□□□□ -2.13
GYPB-214ENST00000513557 RNF213Q63HN8 5207 aa1.76□□□□□ -2.13
GYPB-214ENST00000513557 TRAV23DV6A0A075B6W5 121 aa1.75□□□□□ -2.13
GYPB-214ENST00000513557 TRAV13-2A0A0B4J235 113 aa1.75□□□□□ -2.13
GYPB-214ENST00000513557 SPTSSBQ8NFR3 76 aa1.75□□□□□ -2.13
GYPB-214ENST00000513557 ZNF625Q96I27 306 aaPredicted RBP1.75□□□□□ -2.13
GYPB-214ENST00000513557 CYP4F30PQ9H0H9 118 aa1.75□□□□□ -2.13
GYPB-214ENST00000513557 CDKN2A-AS1Q9UH64 79 aa1.75□□□□□ -2.13
GYPB-214ENST00000513557 LPAP08519 4548 aa1.74□□□□□ -2.13
GYPB-214ENST00000513557 PKHD1L1Q86WI1 4243 aa1.74□□□□□ -2.13
GYPB-214ENST00000513557 TRBV30A0A0K0K1B3 111 aa1.74□□□□□ -2.13
GYPB-214ENST00000513557 KRTDAPP60985 99 aa1.74□□□□□ -2.13
GYPB-214ENST00000513557 PRLHP81277 87 aa1.74□□□□□ -2.13
GYPB-214ENST00000513557 COX7B2Q8TF08 81 aa1.74□□□□□ -2.13
GYPB-214ENST00000513557 SMCO4Q9NRQ5 59 aa1.74□□□□□ -2.13
GYPB-214ENST00000513557 F8VRH5 84 aa1.73□□□□□ -2.13
GYPB-214ENST00000513557 BCE1O60756 84 aa1.73□□□□□ -2.13
GYPB-214ENST00000513557 PMCHL1Q16048 86 aa1.73□□□□□ -2.13
GYPB-214ENST00000513557 LCE1CQ5T751 118 aa1.73□□□□□ -2.13
GYPB-214ENST00000513557 LCE1BQ5T7P3 118 aa1.73□□□□□ -2.13
GYPB-214ENST00000513557 TNXBP22105 4242 aa1.72□□□□□ -2.13
GYPB-214ENST00000513557 HCG22E2RYF7 251 aa1.72□□□□□ -2.13
GYPB-214ENST00000513557 LINC00158P58513 81 aa1.72□□□□□ -2.13
GYPB-214ENST00000513557 SEC11AP67812 179 aa1.72□□□□□ -2.13
GYPB-214ENST00000513557 KRTAP13-4Q3LI77 160 aa1.72□□□□□ -2.13
GYPB-214ENST00000513557 TMEM170BQ5T4T1 132 aa1.72□□□□□ -2.13
GYPB-214ENST00000513557 Q8IZM0 81 aa1.72□□□□□ -2.13
GYPB-214ENST00000513557 VAMP8Q9BV40 100 aa1.72□□□□□ -2.13
GYPB-214ENST00000513557 NXT2Q9NPJ8 142 aaKnown RBP1.72□□□□□ -2.13
GYPB-214ENST00000513557 OBSCNQ5VST9 7968 aa1.72□□□□□ -2.13
GYPB-214ENST00000513557 IGKV3D-7A0A0C4DH55 119 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms