RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 Q96NJ1 140 aa7.06□□□□□ -1.28
PDPN-210ENST00000513143 LINC00472Q9H8W2 130 aa7.06□□□□□ -1.28
PDPN-210ENST00000513143 LINC00846Q9NV44 126 aa7.05□□□□□ -1.28
PDPN-210ENST00000513143 HERC1Q15751 4861 aa7.04□□□□□ -1.28
PDPN-210ENST00000513143 FAM240AA0A1B0GVK7 77 aa7.04□□□□□ -1.28
PDPN-210ENST00000513143 ACYP1P07311 99 aa7.04□□□□□ -1.28
PDPN-210ENST00000513143 NREPQ16612 68 aa7.04□□□□□ -1.28
PDPN-210ENST00000513143 FP248Q71RG6 208 aaPredicted RBP7.04□□□□□ -1.28
PDPN-210ENST00000513143 J3QR89 54 aa7.02□□□□□ -1.28
PDPN-210ENST00000513143 Q6ZVQ6 151 aa7.02□□□□□ -1.28
PDPN-210ENST00000513143 UBL5Q9BZL1 73 aa7.01□□□□□ -1.29
PDPN-210ENST00000513143 PRR4Q16378 134 aa7.01□□□□□ -1.29
PDPN-210ENST00000513143 DEFB116Q30KQ4 102 aa7.01□□□□□ -1.29
PDPN-210ENST00000513143 J3KT08 172 aa7□□□□□ -1.29
PDPN-210ENST00000513143 IGKV4-1P06312 121 aa7□□□□□ -1.29
PDPN-210ENST00000513143 KRTAP4-11Q9BYQ6 195 aa7□□□□□ -1.29
PDPN-210ENST00000513143 IGLV7-46A0A075B6I9 117 aa6.99□□□□□ -1.29
PDPN-210ENST00000513143 KRTAP9-7A8MTY7 169 aa6.98□□□□□ -1.29
PDPN-210ENST00000513143 SIGMAR1Q99720 223 aa6.97□□□□□ -1.29
PDPN-210ENST00000513143 K7ERU9 68 aa6.96□□□□□ -1.3
PDPN-210ENST00000513143 BPY2O14599 106 aa6.96□□□□□ -1.3
PDPN-210ENST00000513143 DSCR10P59022 87 aa6.94□□□□□ -1.3
PDPN-210ENST00000513143 A8MWP4 228 aa6.93□□□□□ -1.3
PDPN-210ENST00000513143 KRTAP13-3Q3SY46 172 aa6.93□□□□□ -1.3
PDPN-210ENST00000513143 NDUFB1O75438 58 aa6.92□□□□□ -1.3
PDPN-210ENST00000513143 TPRXLQ17RH7 258 aa6.92□□□□□ -1.3
PDPN-210ENST00000513143 IGKV3D-7A0A0C4DH55 119 aa6.91□□□□□ -1.3
PDPN-210ENST00000513143 A0A1B0GVX0 72 aa6.91□□□□□ -1.3
PDPN-210ENST00000513143 CXCL6P80162 114 aa6.91□□□□□ -1.3
PDPN-210ENST00000513143 HMCN2Q8NDA2 5059 aa6.91□□□□□ -1.3
PDPN-210ENST00000513143 LINC00643Q86TS7 51 aa6.9□□□□□ -1.3
PDPN-210ENST00000513143 CDIP1Q9H305 208 aa6.9□□□□□ -1.3
PDPN-210ENST00000513143 IGHV6-1A0A0B4J1U7 121 aa6.89□□□□□ -1.31
PDPN-210ENST00000513143 PRR15Q8IV56 129 aa6.89□□□□□ -1.31
PDPN-210ENST00000513143 C9orf92A6NGG3 77 aa6.88□□□□□ -1.31
PDPN-210ENST00000513143 K7EQZ3 153 aa6.88□□□□□ -1.31
PDPN-210ENST00000513143 ATP5EP2Q5VTU8 51 aa6.88□□□□□ -1.31
PDPN-210ENST00000513143 LPAP08519 4548 aa6.88□□□□□ -1.31
PDPN-210ENST00000513143 C8orf87E5RJ46 101 aa6.87□□□□□ -1.31
PDPN-210ENST00000513143 LINC00313P59037 77 aa6.87□□□□□ -1.31
PDPN-210ENST00000513143 NOTCH2NLQ7Z3S9 236 aa6.87□□□□□ -1.31
PDPN-210ENST00000513143 Q8N9L7 120 aa6.86□□□□□ -1.31
PDPN-210ENST00000513143 KRTAP19-4Q3LI73 84 aa6.85□□□□□ -1.31
PDPN-210ENST00000513143 C8orf17Q9NRJ1 99 aa6.84□□□□□ -1.31
PDPN-210ENST00000513143 LRP2P98164 4655 aa6.82□□□□□ -1.32
PDPN-210ENST00000513143 MMP24-AS1A0A0U1RRL7 71 aa6.81□□□□□ -1.32
PDPN-210ENST00000513143 KRTAP16-1A8MUX0 517 aa6.81□□□□□ -1.32
PDPN-210ENST00000513143 LCE5AQ5TCM9 118 aa6.81□□□□□ -1.32
PDPN-210ENST00000513143 hDV103S1A0JD37 113 aa6.77□□□□□ -1.32
PDPN-210ENST00000513143 HIST1H4AP62805 103 aaKnown RBP6.77□□□□□ -1.32
PDPN-210ENST00000513143 C20orf166-AS1Q96NR2 134 aa6.77□□□□□ -1.32
PDPN-210ENST00000513143 HCG22E2RYF7 251 aa6.76□□□□□ -1.33
PDPN-210ENST00000513143 TMEM254Q8TBM7 123 aa6.76□□□□□ -1.33
PDPN-210ENST00000513143 A8MUU9 505 aa6.76□□□□□ -1.33
PDPN-210ENST00000513143 MT-ATP8P03928 68 aa6.76□□□□□ -1.33
PDPN-210ENST00000513143 CASC2Q6XLA1 102 aa6.76□□□□□ -1.33
PDPN-210ENST00000513143 Q75L30 129 aa6.76□□□□□ -1.33
PDPN-210ENST00000513143 WFDC13Q8IUB5 93 aa6.76□□□□□ -1.33
PDPN-210ENST00000513143 MRPL34Q9BQ48 92 aaKnown RBP6.76□□□□□ -1.33
PDPN-210ENST00000513143 RPL37P61927 97 aaKnown RBP6.75□□□□□ -1.33
PDPN-210ENST00000513143 Q8N9P0 234 aaPredicted RBP6.75□□□□□ -1.33
PDPN-210ENST00000513143 IMUPQ9GZP8 106 aa6.74□□□□□ -1.33
PDPN-210ENST00000513143 A0A087WVE0 104 aa6.73□□□□□ -1.33
PDPN-210ENST00000513143 KRTAP9-3Q9BYQ3 159 aa6.73□□□□□ -1.33
PDPN-210ENST00000513143 SEC61BP60468 96 aaKnown RBP6.69□□□□□ -1.34
PDPN-210ENST00000513143 NDUFS5O43920 106 aa6.67□□□□□ -1.34
PDPN-210ENST00000513143 ATP11AUNQ6ZP68 121 aa6.67□□□□□ -1.34
PDPN-210ENST00000513143 MUC17Q685J3 4493 aa6.66□□□□□ -1.34
PDPN-210ENST00000513143 PCOTHQ58A44 107 aa6.66□□□□□ -1.34
PDPN-210ENST00000513143 ZCCHC13Q8WW36 166 aaKnown RBP6.63□□□□□ -1.35
PDPN-210ENST00000513143 TP53AIP1Q9HCN2 124 aa6.62□□□□□ -1.35
PDPN-210ENST00000513143 H3BS24 57 aa6.61□□□□□ -1.35
PDPN-210ENST00000513143 Q5W150 140 aa6.59□□□□□ -1.35
PDPN-210ENST00000513143 UBR4Q5T4S7 5183 aa6.58□□□□□ -1.36
PDPN-210ENST00000513143 FAM236AA0A1B0GUQ0 79 aa6.58□□□□□ -1.36
PDPN-210ENST00000513143 FAM236BA0A1B0GV22 79 aa6.58□□□□□ -1.36
PDPN-210ENST00000513143 SCGB1A1P11684 91 aa6.57□□□□□ -1.36
PDPN-210ENST00000513143 OCR1Q9BZK8 76 aa6.57□□□□□ -1.36
PDPN-210ENST00000513143 KRTAP4-1Q9BYQ7 146 aa6.56□□□□□ -1.36
PDPN-210ENST00000513143 UQCRQO14949 82 aa6.55□□□□□ -1.36
PDPN-210ENST00000513143 TRAV22A0A0B4J277 110 aa6.51□□□□□ -1.37
PDPN-210ENST00000513143 ATOX1O00244 68 aa6.5□□□□□ -1.37
PDPN-210ENST00000513143 SMIM20Q8N5G0 67 aa6.5□□□□□ -1.37
PDPN-210ENST00000513143 SPINK7P58062 85 aa6.5□□□□□ -1.37
PDPN-210ENST00000513143 RNF213Q63HN8 5207 aa6.48□□□□□ -1.37
PDPN-210ENST00000513143 TRAV7A0A075B6U4 112 aa6.48□□□□□ -1.37
PDPN-210ENST00000513143 H0Y9P7 68 aa6.48□□□□□ -1.37
PDPN-210ENST00000513143 C5orf47Q569G3 176 aa6.48□□□□□ -1.37
PDPN-210ENST00000513143 IGKV2-30P06310 120 aa6.47□□□□□ -1.37
PDPN-210ENST00000513143 MUC2Q02817 5179 aa6.46□□□□□ -1.37
PDPN-210ENST00000513143 IGKV2D-30A0A075B6S6 120 aa6.46□□□□□ -1.38
PDPN-210ENST00000513143 C7orf65Q6ZTY9 151 aa6.46□□□□□ -1.38
PDPN-210ENST00000513143 LOC101927531A0A1B0GV80 90 aa6.44□□□□□ -1.38
PDPN-210ENST00000513143 MP68P56378 58 aa6.44□□□□□ -1.38
PDPN-210ENST00000513143 HRES1P13985 223 aa6.43□□□□□ -1.38
PDPN-210ENST00000513143 KRTAP5-3Q6L8H2 238 aa6.43□□□□□ -1.38
PDPN-210ENST00000513143 H3BPC8 53 aa6.42□□□□□ -1.38
PDPN-210ENST00000513143 SERP2Q8N6R1 65 aa6.42□□□□□ -1.38
PDPN-210ENST00000513143 C1orf64Q8NEQ6 169 aa6.42□□□□□ -1.38
PDPN-210ENST00000513143 LINC00208Q96KT6 92 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms