RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 H0YGX0 51 aa3.57□□□□□ -1.84
RFC1-215ENST00000512881 NDUFV3P56181 108 aaKnown RBP3.56□□□□□ -1.84
RFC1-215ENST00000512881 Q6Q795 121 aa3.56□□□□□ -1.84
RFC1-215ENST00000512881 TEN1Q86WV5 123 aa3.56□□□□□ -1.84
RFC1-215ENST00000512881 FAM218AQ96MZ4 157 aa3.56□□□□□ -1.84
RFC1-215ENST00000512881 Q96NJ1 140 aa3.56□□□□□ -1.84
RFC1-215ENST00000512881 HIGD1BQ9P298 99 aa3.56□□□□□ -1.84
RFC1-215ENST00000512881 SS18L2Q9UHA2 77 aa3.56□□□□□ -1.84
RFC1-215ENST00000512881 USH2AO75445 5202 aa3.56□□□□□ -1.84
RFC1-215ENST00000512881 A0A0B4J2C4 111 aa3.55□□□□□ -1.84
RFC1-215ENST00000512881 SPATA45Q537H7 98 aa3.55□□□□□ -1.84
RFC1-215ENST00000512881 A0A087WSZ3 146 aa3.54□□□□□ -1.84
RFC1-215ENST00000512881 H3BMG7 143 aa3.54□□□□□ -1.84
RFC1-215ENST00000512881 FABP2P12104 132 aa3.54□□□□□ -1.84
RFC1-215ENST00000512881 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
RFC1-215ENST00000512881 C2orf91Q6ZV80 131 aa3.54□□□□□ -1.84
RFC1-215ENST00000512881 PRAC1Q96KF2 57 aa3.54□□□□□ -1.84
RFC1-215ENST00000512881 A0A1B0GX51 115 aa3.53□□□□□ -1.84
RFC1-215ENST00000512881 A8MUU9 505 aa3.53□□□□□ -1.84
RFC1-215ENST00000512881 CEND1Q8N111 149 aa3.53□□□□□ -1.84
RFC1-215ENST00000512881 C20orf166-AS1Q96NR2 134 aa3.53□□□□□ -1.84
RFC1-215ENST00000512881 VAMP8Q9BV40 100 aa3.53□□□□□ -1.84
RFC1-215ENST00000512881 PRO1854Q9UHT4 67 aa3.53□□□□□ -1.84
RFC1-215ENST00000512881 SSPOA2VEC9 5147 aa3.52□□□□□ -1.85
RFC1-215ENST00000512881 A0A1W2PNM2 257 aa3.51□□□□□ -1.85
RFC1-215ENST00000512881 FXYD2P54710 66 aa3.51□□□□□ -1.85
RFC1-215ENST00000512881 UBE2V1Q13404 147 aa3.51□□□□□ -1.85
RFC1-215ENST00000512881 ANKRD29Q8N6D5 301 aa3.5□□□□□ -1.85
RFC1-215ENST00000512881 TRBV20-1A0A075B6N2 111 aa3.49□□□□□ -1.85
RFC1-215ENST00000512881 LINC00313P59037 77 aa3.49□□□□□ -1.85
RFC1-215ENST00000512881 SIGMAR1Q99720 223 aa3.49□□□□□ -1.85
RFC1-215ENST00000512881 TRBV7-4A0A0J9YYF1 115 aa3.48□□□□□ -1.85
RFC1-215ENST00000512881 A0A1B0GV72 72 aa3.48□□□□□ -1.85
RFC1-215ENST00000512881 H3BQ85 93 aa3.48□□□□□ -1.85
RFC1-215ENST00000512881 DNAL4O96015 105 aa3.48□□□□□ -1.85
RFC1-215ENST00000512881 IGKV4-1P06312 121 aa3.48□□□□□ -1.85
RFC1-215ENST00000512881 PSMB2P49721 201 aa3.48□□□□□ -1.85
RFC1-215ENST00000512881 ORMDL1Q9P0S3 153 aa3.48□□□□□ -1.85
RFC1-215ENST00000512881 TMEM256-PLSCR3K7ERE1 68 aa3.47□□□□□ -1.85
RFC1-215ENST00000512881 K7ERJ3 54 aa3.47□□□□□ -1.85
RFC1-215ENST00000512881 DEFB116Q30KQ4 102 aa3.47□□□□□ -1.85
RFC1-215ENST00000512881 COX6CP09669 75 aa3.46□□□□□ -1.86
RFC1-215ENST00000512881 HSD52Q0P140 79 aa3.46□□□□□ -1.86
RFC1-215ENST00000512881 LINC00472Q9H8W2 130 aa3.46□□□□□ -1.86
RFC1-215ENST00000512881 CCKP06307 115 aa3.45□□□□□ -1.86
RFC1-215ENST00000512881 PYY3Q5JQD4 70 aa3.45□□□□□ -1.86
RFC1-215ENST00000512881 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
RFC1-215ENST00000512881 IGHV6-1A0A0B4J1U7 121 aa3.44□□□□□ -1.86
RFC1-215ENST00000512881 TRACP01848 142 aa3.44□□□□□ -1.86
RFC1-215ENST00000512881 FCGBPQ9Y6R7 5405 aaPredicted RBP3.44□□□□□ -1.86
RFC1-215ENST00000512881 FAM236DA0A1B0GTK5 79 aa3.43□□□□□ -1.86
RFC1-215ENST00000512881 SCGB1C2P0DMR2 95 aa3.43□□□□□ -1.86
RFC1-215ENST00000512881 FAM236CP0DP71 79 aa3.43□□□□□ -1.86
RFC1-215ENST00000512881 HRES1P13985 223 aa3.42□□□□□ -1.86
RFC1-215ENST00000512881 RBM3P98179 157 aaKnown RBP3.42□□□□□ -1.86
RFC1-215ENST00000512881 VPS25Q9BRG1 176 aa3.42□□□□□ -1.86
RFC1-215ENST00000512881 RBM12B-AS1Q9P1G2 102 aa3.42□□□□□ -1.86
RFC1-215ENST00000512881 UQCR10Q9UDW1 63 aa3.42□□□□□ -1.86
RFC1-215ENST00000512881 A0A1B0GVX0 72 aa3.41□□□□□ -1.86
RFC1-215ENST00000512881 MT2AP02795 61 aa3.41□□□□□ -1.86
RFC1-215ENST00000512881 KRTAP12-2P59991 146 aa3.41□□□□□ -1.86
RFC1-215ENST00000512881 DSCR8Q96T75 97 aa3.41□□□□□ -1.86
RFC1-215ENST00000512881 C8orf87E5RJ46 101 aa3.4□□□□□ -1.87
RFC1-215ENST00000512881 BAALC-AS2P0C853 105 aa3.4□□□□□ -1.87
RFC1-215ENST00000512881 C9JAW5 83 aa3.39□□□□□ -1.87
RFC1-215ENST00000512881 J3KT08 172 aa3.39□□□□□ -1.87
RFC1-215ENST00000512881 KRTAP4-3Q9BYR4 195 aa3.39□□□□□ -1.87
RFC1-215ENST00000512881 MT1FP04733 61 aa3.38□□□□□ -1.87
RFC1-215ENST00000512881 LCE3AQ5TA76 89 aa3.38□□□□□ -1.87
RFC1-215ENST00000512881 Q6ZQT0 140 aa3.38□□□□□ -1.87
RFC1-215ENST00000512881 ZCCHC13Q8WW36 166 aaKnown RBP3.38□□□□□ -1.87
RFC1-215ENST00000512881 SPINK7P58062 85 aa3.37□□□□□ -1.87
RFC1-215ENST00000512881 KRTAP10-10P60014 251 aa3.37□□□□□ -1.87
RFC1-215ENST00000512881 MTURNQ8N3F0 131 aa3.37□□□□□ -1.87
RFC1-215ENST00000512881 NDUFB1O75438 58 aa3.36□□□□□ -1.87
RFC1-215ENST00000512881 LOC110117498A0A087WWA1 95 aa3.34□□□□□ -1.87
RFC1-215ENST00000512881 A0A1B0GW54 56 aa3.34□□□□□ -1.87
RFC1-215ENST00000512881 A8MWP4 228 aa3.34□□□□□ -1.87
RFC1-215ENST00000512881 JMJD7-PLA2G4BH0Y9G9 81 aa3.34□□□□□ -1.87
RFC1-215ENST00000512881 ATXN8Q156A1 80 aa3.34□□□□□ -1.87
RFC1-215ENST00000512881 NAA38Q9BRA0 125 aaKnown RBP3.34□□□□□ -1.87
RFC1-215ENST00000512881 C8orf17Q9NRJ1 99 aa3.34□□□□□ -1.87
RFC1-215ENST00000512881 IGKV3D-7A0A0C4DH55 119 aa3.33□□□□□ -1.88
RFC1-215ENST00000512881 PDE6GP18545 87 aa3.33□□□□□ -1.88
RFC1-215ENST00000512881 LYRM7Q5U5X0 104 aa3.33□□□□□ -1.88
RFC1-215ENST00000512881 M0R143 59 aa3.32□□□□□ -1.88
RFC1-215ENST00000512881 NREPQ16612 68 aa3.31□□□□□ -1.88
RFC1-215ENST00000512881 Q6ZVQ6 151 aa3.31□□□□□ -1.88
RFC1-215ENST00000512881 WFDC13Q8IUB5 93 aa3.31□□□□□ -1.88
RFC1-215ENST00000512881 PRR15Q8IV56 129 aa3.31□□□□□ -1.88
RFC1-215ENST00000512881 C14orf132Q9NPU4 83 aa3.31□□□□□ -1.88
RFC1-215ENST00000512881 MACF1Q9UPN3 7388 aaKnown RBP3.3□□□□□ -1.88
RFC1-215ENST00000512881 SYNE2Q8WXH0 6885 aaKnown RBP3.29□□□□□ -1.88
RFC1-215ENST00000512881 A8MU10 97 aa3.29□□□□□ -1.88
RFC1-215ENST00000512881 MRPL34Q9BQ48 92 aaKnown RBP3.28□□□□□ -1.88
RFC1-215ENST00000512881 MMP24-AS1A0A0U1RRL7 71 aa3.27□□□□□ -1.89
RFC1-215ENST00000512881 TMEM254Q8TBM7 123 aa3.27□□□□□ -1.89
RFC1-215ENST00000512881 hDV103S1A0JD37 113 aa3.26□□□□□ -1.89
RFC1-215ENST00000512881 H1FX-AS1Q4G0G2 97 aa3.26□□□□□ -1.89
RFC1-215ENST00000512881 K7EQZ3 153 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms