RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 FABP2P12104 132 aa3.66□□□□□ -1.82
USP46-208ENST00000512656 PAM16Q9Y3D7 125 aa3.66□□□□□ -1.82
USP46-208ENST00000512656 DSCR10P59022 87 aa3.65□□□□□ -1.83
USP46-208ENST00000512656 LINC00313P59037 77 aa3.65□□□□□ -1.83
USP46-208ENST00000512656 SIGMAR1Q99720 223 aa3.65□□□□□ -1.83
USP46-208ENST00000512656 HIGD1BQ9P298 99 aa3.65□□□□□ -1.83
USP46-208ENST00000512656 USH2AO75445 5202 aa3.65□□□□□ -1.83
USP46-208ENST00000512656 FAM236DA0A1B0GTK5 79 aa3.64□□□□□ -1.83
USP46-208ENST00000512656 H3BQ85 93 aa3.64□□□□□ -1.83
USP46-208ENST00000512656 FAM236CP0DP71 79 aa3.64□□□□□ -1.83
USP46-208ENST00000512656 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
USP46-208ENST00000512656 FAM218AQ96MZ4 157 aa3.64□□□□□ -1.83
USP46-208ENST00000512656 S100A1P23297 94 aa3.63□□□□□ -1.83
USP46-208ENST00000512656 C14orf144Q96I85 54 aa3.63□□□□□ -1.83
USP46-208ENST00000512656 RBM12B-AS1Q9P1G2 102 aa3.63□□□□□ -1.83
USP46-208ENST00000512656 PRO1854Q9UHT4 67 aa3.63□□□□□ -1.83
USP46-208ENST00000512656 TRBV7-4A0A0J9YYF1 115 aa3.62□□□□□ -1.83
USP46-208ENST00000512656 DNAL4O96015 105 aa3.62□□□□□ -1.83
USP46-208ENST00000512656 IGKV4-1P06312 121 aa3.62□□□□□ -1.83
USP46-208ENST00000512656 SPATA45Q537H7 98 aa3.62□□□□□ -1.83
USP46-208ENST00000512656 ANKRD29Q8N6D5 301 aa3.62□□□□□ -1.83
USP46-208ENST00000512656 SSPOA2VEC9 5147 aa3.61□□□□□ -1.83
USP46-208ENST00000512656 A0A1W2PNM2 257 aa3.61□□□□□ -1.83
USP46-208ENST00000512656 CEND1Q8N111 149 aa3.61□□□□□ -1.83
USP46-208ENST00000512656 VAMP8Q9BV40 100 aa3.61□□□□□ -1.83
USP46-208ENST00000512656 ORMDL1Q9P0S3 153 aa3.61□□□□□ -1.83
USP46-208ENST00000512656 KRTAP16-1A8MUX0 517 aa3.59□□□□□ -1.83
USP46-208ENST00000512656 TMEM256-PLSCR3K7ERE1 68 aa3.59□□□□□ -1.83
USP46-208ENST00000512656 TRACP01848 142 aa3.59□□□□□ -1.83
USP46-208ENST00000512656 COX6CP09669 75 aa3.59□□□□□ -1.83
USP46-208ENST00000512656 C2orf91Q6ZV80 131 aa3.59□□□□□ -1.83
USP46-208ENST00000512656 MTURNQ8N3F0 131 aa3.59□□□□□ -1.83
USP46-208ENST00000512656 IGHV6-1A0A0B4J1U7 121 aa3.58□□□□□ -1.84
USP46-208ENST00000512656 MT2AP02795 61 aa3.58□□□□□ -1.84
USP46-208ENST00000512656 CCKP06307 115 aa3.58□□□□□ -1.84
USP46-208ENST00000512656 PSMB2P49721 201 aa3.58□□□□□ -1.84
USP46-208ENST00000512656 LINC00472Q9H8W2 130 aa3.58□□□□□ -1.84
USP46-208ENST00000512656 FCGBPQ9Y6R7 5405 aaPredicted RBP3.57□□□□□ -1.84
USP46-208ENST00000512656 A0A1B0GV72 72 aa3.57□□□□□ -1.84
USP46-208ENST00000512656 C8orf87E5RJ46 101 aa3.57□□□□□ -1.84
USP46-208ENST00000512656 HRES1P13985 223 aa3.57□□□□□ -1.84
USP46-208ENST00000512656 FXYD2P54710 66 aa3.57□□□□□ -1.84
USP46-208ENST00000512656 KRTAP10-10P60014 251 aa3.57□□□□□ -1.84
USP46-208ENST00000512656 DEFB116Q30KQ4 102 aa3.57□□□□□ -1.84
USP46-208ENST00000512656 KRTAP5-4Q6L8H1 288 aa3.57□□□□□ -1.84
USP46-208ENST00000512656 UBE2V1Q13404 147 aa3.56□□□□□ -1.84
USP46-208ENST00000512656 HSD52Q0P140 79 aa3.55□□□□□ -1.84
USP46-208ENST00000512656 NOTCH2NLQ7Z3S9 236 aa3.55□□□□□ -1.84
USP46-208ENST00000512656 A0A1B0GVX0 72 aa3.54□□□□□ -1.84
USP46-208ENST00000512656 J3KT08 172 aa3.54□□□□□ -1.84
USP46-208ENST00000512656 MT1FP04733 61 aa3.54□□□□□ -1.84
USP46-208ENST00000512656 VPS25Q9BRG1 176 aa3.54□□□□□ -1.84
USP46-208ENST00000512656 LINC00846Q9NV44 126 aa3.54□□□□□ -1.84
USP46-208ENST00000512656 RBM3P98179 157 aaKnown RBP3.53□□□□□ -1.84
USP46-208ENST00000512656 ZCCHC13Q8WW36 166 aaKnown RBP3.53□□□□□ -1.84
USP46-208ENST00000512656 DSCR8Q96T75 97 aa3.53□□□□□ -1.84
USP46-208ENST00000512656 K7ERJ3 54 aa3.52□□□□□ -1.85
USP46-208ENST00000512656 NDUFB1O75438 58 aa3.52□□□□□ -1.85
USP46-208ENST00000512656 SCGB1C2P0DMR2 95 aa3.52□□□□□ -1.85
USP46-208ENST00000512656 KRTAP4-4Q9BYR3 166 aa3.52□□□□□ -1.85
USP46-208ENST00000512656 C9JAW5 83 aa3.51□□□□□ -1.85
USP46-208ENST00000512656 SPINK7P58062 85 aa3.51□□□□□ -1.85
USP46-208ENST00000512656 LYRM7Q5U5X0 104 aa3.51□□□□□ -1.85
USP46-208ENST00000512656 SVIPQ8NHG7 77 aa3.51□□□□□ -1.85
USP46-208ENST00000512656 A8MWP4 228 aa3.49□□□□□ -1.85
USP46-208ENST00000512656 BAALC-AS2P0C853 105 aa3.49□□□□□ -1.85
USP46-208ENST00000512656 KRTAP5-9P26371 169 aa3.49□□□□□ -1.85
USP46-208ENST00000512656 Q6ZQT0 140 aa3.49□□□□□ -1.85
USP46-208ENST00000512656 A0A1B0GW54 56 aa3.48□□□□□ -1.85
USP46-208ENST00000512656 UQCR10Q9UDW1 63 aa3.48□□□□□ -1.85
USP46-208ENST00000512656 WFDC13Q8IUB5 93 aa3.47□□□□□ -1.85
USP46-208ENST00000512656 JMJD7-PLA2G4BH0Y9G9 81 aa3.46□□□□□ -1.86
USP46-208ENST00000512656 PDE6GP18545 87 aa3.46□□□□□ -1.86
USP46-208ENST00000512656 PYY3Q5JQD4 70 aa3.46□□□□□ -1.86
USP46-208ENST00000512656 C8orf17Q9NRJ1 99 aa3.46□□□□□ -1.86
USP46-208ENST00000512656 Q6ZVQ6 151 aa3.45□□□□□ -1.86
USP46-208ENST00000512656 LOC110117498A0A087WWA1 95 aa3.44□□□□□ -1.86
USP46-208ENST00000512656 ATXN8Q156A1 80 aa3.44□□□□□ -1.86
USP46-208ENST00000512656 KRTAP19-6Q3LI70 58 aa3.44□□□□□ -1.86
USP46-208ENST00000512656 IGKV3D-7A0A0C4DH55 119 aa3.43□□□□□ -1.86
USP46-208ENST00000512656 NREPQ16612 68 aa3.42□□□□□ -1.86
USP46-208ENST00000512656 H1FX-AS1Q4G0G2 97 aa3.42□□□□□ -1.86
USP46-208ENST00000512656 PRR15Q8IV56 129 aa3.42□□□□□ -1.86
USP46-208ENST00000512656 LCE3CQ5T5A8 94 aa3.41□□□□□ -1.86
USP46-208ENST00000512656 TMEM254Q8TBM7 123 aa3.41□□□□□ -1.86
USP46-208ENST00000512656 MRPL34Q9BQ48 92 aaKnown RBP3.41□□□□□ -1.86
USP46-208ENST00000512656 SYNE2Q8WXH0 6885 aaKnown RBP3.4□□□□□ -1.86
USP46-208ENST00000512656 M0R143 59 aa3.4□□□□□ -1.87
USP46-208ENST00000512656 C14orf132Q9NPU4 83 aa3.4□□□□□ -1.87
USP46-208ENST00000512656 MACF1Q9UPN3 7388 aaKnown RBP3.4□□□□□ -1.87
USP46-208ENST00000512656 NDUFS5O43920 106 aa3.39□□□□□ -1.87
USP46-208ENST00000512656 MMP24-AS1A0A0U1RRL7 71 aa3.38□□□□□ -1.87
USP46-208ENST00000512656 hDV103S1A0JD37 113 aa3.38□□□□□ -1.87
USP46-208ENST00000512656 NAA38Q9BRA0 125 aaKnown RBP3.37□□□□□ -1.87
USP46-208ENST00000512656 C7orf65Q6ZTY9 151 aa3.36□□□□□ -1.87
USP46-208ENST00000512656 K7EQZ3 153 aa3.35□□□□□ -1.87
USP46-208ENST00000512656 KRTAP6-3Q3LI67 103 aa3.35□□□□□ -1.87
USP46-208ENST00000512656 BPY2O14599 106 aa3.34□□□□□ -1.87
USP46-208ENST00000512656 H3BT86 120 aa3.32□□□□□ -1.88
USP46-208ENST00000512656 CXCL6P80162 114 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms