RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 COL6A5A8TX70 2615 aa3.25□□□□□ -1.89
TRAPPC11-209ENST00000512476 LCE6AA0A183 80 aa3.25□□□□□ -1.89
TRAPPC11-209ENST00000512476 COA5Q86WW8 74 aa3.25□□□□□ -1.89
TRAPPC11-209ENST00000512476 HTN3P15516 51 aa3.25□□□□□ -1.89
TRAPPC11-209ENST00000512476 ACYP2P14621 99 aa3.24□□□□□ -1.89
TRAPPC11-209ENST00000512476 A0A096LPF7 62 aa3.23□□□□□ -1.89
TRAPPC11-209ENST00000512476 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
TRAPPC11-209ENST00000512476 H3BNG1 76 aa3.23□□□□□ -1.89
TRAPPC11-209ENST00000512476 PKD1L1Q8TDX9 2849 aa3.22□□□□□ -1.89
TRAPPC11-209ENST00000512476 NDUFB1O75438 58 aa3.22□□□□□ -1.89
TRAPPC11-209ENST00000512476 KRTAP21-3Q3LHN1 58 aa3.22□□□□□ -1.89
TRAPPC11-209ENST00000512476 IGLV4-60A0A075B6I1 120 aa3.22□□□□□ -1.89
TRAPPC11-209ENST00000512476 DEFB131BA0A096LNP1 70 aa3.21□□□□□ -1.9
TRAPPC11-209ENST00000512476 KRTAP1-4P0C5Y4 121 aa3.21□□□□□ -1.9
TRAPPC11-209ENST00000512476 OBSCN-AS1Q96MR7 158 aa3.21□□□□□ -1.9
TRAPPC11-209ENST00000512476 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
TRAPPC11-209ENST00000512476 NBEAL2Q6ZNJ1 2754 aa3.21□□□□□ -1.9
TRAPPC11-209ENST00000512476 LELP1Q5T871 98 aa3.21□□□□□ -1.9
TRAPPC11-209ENST00000512476 COX6A2Q02221 97 aa3.2□□□□□ -1.9
TRAPPC11-209ENST00000512476 UBL5Q9BZL1 73 aa3.2□□□□□ -1.9
TRAPPC11-209ENST00000512476 CDKN2A-AS1Q9UH64 79 aa3.2□□□□□ -1.9
TRAPPC11-209ENST00000512476 A0A1B0GU69 56 aa3.19□□□□□ -1.9
TRAPPC11-209ENST00000512476 FLG2Q5D862 2391 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC11-209ENST00000512476 INE1O15225 51 aa3.18□□□□□ -1.9
TRAPPC11-209ENST00000512476 ANGP03950 147 aaKnown RBP3.18□□□□□ -1.9
TRAPPC11-209ENST00000512476 CLPSL2Q6UWE3 100 aa3.18□□□□□ -1.9
TRAPPC11-209ENST00000512476 HUWE1Q7Z6Z7 4374 aaKnown RBP3.18□□□□□ -1.9
TRAPPC11-209ENST00000512476 NOTCH1P46531 2555 aa3.18□□□□□ -1.9
TRAPPC11-209ENST00000512476 TENM3Q9P273 2699 aa3.17□□□□□ -1.9
TRAPPC11-209ENST00000512476 WFDC10BQ8IUB3 73 aa3.17□□□□□ -1.9
TRAPPC11-209ENST00000512476 MGAM2Q2M2H8 2515 aa3.17□□□□□ -1.9
TRAPPC11-209ENST00000512476 SSBP3-AS1Q7Z2R9 100 aa3.17□□□□□ -1.9
TRAPPC11-209ENST00000512476 NBEAL1Q6ZS30 2694 aa3.16□□□□□ -1.9
TRAPPC11-209ENST00000512476 HAMPP81172 84 aa3.16□□□□□ -1.9
TRAPPC11-209ENST00000512476 NDUFA1O15239 70 aa3.15□□□□□ -1.91
TRAPPC11-209ENST00000512476 LINC01556Q5JQF7 62 aa3.15□□□□□ -1.91
TRAPPC11-209ENST00000512476 Q6ZQY7 126 aa3.15□□□□□ -1.91
TRAPPC11-209ENST00000512476 DNAH9Q9NYC9 4486 aa3.14□□□□□ -1.91
TRAPPC11-209ENST00000512476 DNHD1Q96M86 4753 aa3.14□□□□□ -1.91
TRAPPC11-209ENST00000512476 ANAPC11Q9NYG5 84 aa3.14□□□□□ -1.91
TRAPPC11-209ENST00000512476 TOMM7Q9P0U1 55 aa3.14□□□□□ -1.91
TRAPPC11-209ENST00000512476 APLNQ9ULZ1 77 aa3.14□□□□□ -1.91
TRAPPC11-209ENST00000512476 Q8IZM0 81 aa3.13□□□□□ -1.91
TRAPPC11-209ENST00000512476 CRIPTQ9P021 101 aa3.13□□□□□ -1.91
TRAPPC11-209ENST00000512476 M0R2N4 97 aa3.13□□□□□ -1.91
TRAPPC11-209ENST00000512476 COX17Q14061 63 aa3.13□□□□□ -1.91
TRAPPC11-209ENST00000512476 COX7BP24311 80 aa3.12□□□□□ -1.91
TRAPPC11-209ENST00000512476 KRTAP10-6P60371 365 aaPredicted RBP3.12□□□□□ -1.91
TRAPPC11-209ENST00000512476 IGKV2-28A0A075B6P5 120 aa3.11□□□□□ -1.91
TRAPPC11-209ENST00000512476 LY6G6CO95867 125 aa3.11□□□□□ -1.91
TRAPPC11-209ENST00000512476 IGKV2D-28P01615 120 aa3.11□□□□□ -1.91
TRAPPC11-209ENST00000512476 COL7A1Q02388 2944 aa3.1□□□□□ -1.91
TRAPPC11-209ENST00000512476 Q6ZRX8 168 aa3.1□□□□□ -1.91
TRAPPC11-209ENST00000512476 UBE2DNLQ8IWF7 75 aa3.1□□□□□ -1.91
TRAPPC11-209ENST00000512476 LINC00308Q8TCZ7 52 aa3.1□□□□□ -1.91
TRAPPC11-209ENST00000512476 KRTAP9-3Q9BYQ3 159 aa3.1□□□□□ -1.91
TRAPPC11-209ENST00000512476 LINC00158P58513 81 aa3.1□□□□□ -1.91
TRAPPC11-209ENST00000512476 UNQ6190/PRO20217Q6UXQ8 127 aa3.09□□□□□ -1.91
TRAPPC11-209ENST00000512476 KRTAP1-5Q9BYS1 174 aa3.09□□□□□ -1.91
TRAPPC11-209ENST00000512476 PRKDCP78527 4128 aaKnown RBP3.09□□□□□ -1.92
TRAPPC11-209ENST00000512476 MEGF8Q7Z7M0 2845 aa3.09□□□□□ -1.92
TRAPPC11-209ENST00000512476 IGKV2-24A0A0C4DH68 120 aa3.09□□□□□ -1.92
TRAPPC11-209ENST00000512476 LCE1AQ5T7P2 110 aa3.09□□□□□ -1.92
TRAPPC11-209ENST00000512476 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.92
TRAPPC11-209ENST00000512476 GVQW2A0A096LPI5 108 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC11-209ENST00000512476 DYNC2H1Q8NCM8 4307 aaKnown RBP3.08□□□□□ -1.92
TRAPPC11-209ENST00000512476 C6orf48Q9UBA6 75 aa3.08□□□□□ -1.92
TRAPPC11-209ENST00000512476 STAB2Q8WWQ8 2551 aa3.07□□□□□ -1.92
TRAPPC11-209ENST00000512476 DNAH1Q9P2D7 4330 aa3.05□□□□□ -1.92
TRAPPC11-209ENST00000512476 DNAH7Q8WXX0 4024 aa3.04□□□□□ -1.92
TRAPPC11-209ENST00000512476 CSMD3Q7Z407 3707 aa3.04□□□□□ -1.92
TRAPPC11-209ENST00000512476 FBN3Q75N90 2809 aa3.04□□□□□ -1.92
TRAPPC11-209ENST00000512476 NCR3O14931 201 aa3.03□□□□□ -1.92
TRAPPC11-209ENST00000512476 PLAC4Q8WY50 150 aa3.03□□□□□ -1.92
TRAPPC11-209ENST00000512476 STARD9Q9P2P6 4700 aa3.03□□□□□ -1.92
TRAPPC11-209ENST00000512476 LOC100996750A0A140TA64 210 aa3.02□□□□□ -1.93
TRAPPC11-209ENST00000512476 KRTAP4-6Q9BYQ5 205 aa3.02□□□□□ -1.93
TRAPPC11-209ENST00000512476 PLECQ15149 4684 aaKnown RBP3.02□□□□□ -1.93
TRAPPC11-209ENST00000512476 IGFL1Q6UW32 110 aa3.02□□□□□ -1.93
TRAPPC11-209ENST00000512476 SMIM11BQ8TCY0 68 aa3.02□□□□□ -1.93
TRAPPC11-209ENST00000512476 LYSTQ99698 3801 aa3.01□□□□□ -1.93
TRAPPC11-209ENST00000512476 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.01□□□□□ -1.93
TRAPPC11-209ENST00000512476 VPS13DQ5THJ4 4388 aa3□□□□□ -1.93
TRAPPC11-209ENST00000512476 KRTAP9-2Q9BYQ4 174 aa3□□□□□ -1.93
TRAPPC11-209ENST00000512476 KCNQ1DNQ9H478 68 aa3□□□□□ -1.93
TRAPPC11-209ENST00000512476 LCE3CQ5T5A8 94 aa3□□□□□ -1.93
TRAPPC11-209ENST00000512476 KRTAP4-8Q9BYQ9 185 aa2.99□□□□□ -1.93
TRAPPC11-209ENST00000512476 ETDCA0A1B0GVM5 59 aa2.99□□□□□ -1.93
TRAPPC11-209ENST00000512476 A0A096LNI7 61 aa2.98□□□□□ -1.93
TRAPPC11-209ENST00000512476 H0YGX0 51 aa2.98□□□□□ -1.93
TRAPPC11-209ENST00000512476 TENM2Q9NT68 2774 aa2.97□□□□□ -1.93
TRAPPC11-209ENST00000512476 DNAH10Q8IVF4 4471 aa2.97□□□□□ -1.93
TRAPPC11-209ENST00000512476 ALMS1Q8TCU4 4167 aa2.97□□□□□ -1.93
TRAPPC11-209ENST00000512476 DNAH6Q9C0G6 4158 aa2.96□□□□□ -1.94
TRAPPC11-209ENST00000512476 KRTAP10-1P60331 282 aa2.95□□□□□ -1.94
TRAPPC11-209ENST00000512476 LINC00575Q6W349 94 aa2.95□□□□□ -1.94
TRAPPC11-209ENST00000512476 PP632Q6XCG6 107 aa2.95□□□□□ -1.94
TRAPPC11-209ENST00000512476 KMT2AQ03164 3969 aa2.94□□□□□ -1.94
TRAPPC11-209ENST00000512476 SPRR1AP35321 89 aa2.94□□□□□ -1.94
TRAPPC11-209ENST00000512476 KRTAP12-2P59991 146 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms