RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 ASB16-AS1Q495Z4 193 aa6.07□□□□□ -1.44
PDLIM5-217ENST00000512274 ANAPC11Q9NYG5 84 aa6.07□□□□□ -1.44
PDLIM5-217ENST00000512274 A0A087WSZ3 146 aa6.06□□□□□ -1.44
PDLIM5-217ENST00000512274 KRTAP13-2Q52LG2 175 aa6.06□□□□□ -1.44
PDLIM5-217ENST00000512274 A0A087X002 238 aa6.05□□□□□ -1.44
PDLIM5-217ENST00000512274 RPS29P62273 56 aaKnown RBP6.05□□□□□ -1.44
PDLIM5-217ENST00000512274 LINC00472Q9H8W2 130 aa6.05□□□□□ -1.44
PDLIM5-217ENST00000512274 J3KT08 172 aa6.04□□□□□ -1.44
PDLIM5-217ENST00000512274 BPY2O14599 106 aa6.04□□□□□ -1.44
PDLIM5-217ENST00000512274 HIST1H4AP62805 103 aaKnown RBP6.04□□□□□ -1.44
PDLIM5-217ENST00000512274 KRTAP9-7A8MTY7 169 aa6.03□□□□□ -1.44
PDLIM5-217ENST00000512274 LCE3BQ5TA77 95 aa6.03□□□□□ -1.44
PDLIM5-217ENST00000512274 IGKV3D-7A0A0C4DH55 119 aa6.02□□□□□ -1.45
PDLIM5-217ENST00000512274 A0A0G2JQZ4 141 aa6.02□□□□□ -1.45
PDLIM5-217ENST00000512274 SPAG11AQ6PDA7 123 aa6.01□□□□□ -1.45
PDLIM5-217ENST00000512274 DSCR10P59022 87 aa6□□□□□ -1.45
PDLIM5-217ENST00000512274 Q96NJ1 140 aa6□□□□□ -1.45
PDLIM5-217ENST00000512274 SPINK1P00995 79 aa5.99□□□□□ -1.45
PDLIM5-217ENST00000512274 IGKV4-1P06312 121 aa5.99□□□□□ -1.45
PDLIM5-217ENST00000512274 TYMSOSQ8TAI1 123 aa5.98□□□□□ -1.45
PDLIM5-217ENST00000512274 LIMD2Q9BT23 127 aa5.98□□□□□ -1.45
PDLIM5-217ENST00000512274 A8MWP4 228 aa5.97□□□□□ -1.45
PDLIM5-217ENST00000512274 FAM236AA0A1B0GUQ0 79 aa5.96□□□□□ -1.46
PDLIM5-217ENST00000512274 FAM236BA0A1B0GV22 79 aa5.96□□□□□ -1.46
PDLIM5-217ENST00000512274 ATOX1O00244 68 aa5.96□□□□□ -1.46
PDLIM5-217ENST00000512274 PRR15Q8IV56 129 aa5.95□□□□□ -1.46
PDLIM5-217ENST00000512274 RETNLBQ9BQ08 111 aa5.95□□□□□ -1.46
PDLIM5-217ENST00000512274 A0A087WVE0 104 aa5.94□□□□□ -1.46
PDLIM5-217ENST00000512274 SMIM20Q8N5G0 67 aa5.94□□□□□ -1.46
PDLIM5-217ENST00000512274 LINC00304Q8N9R0 145 aa5.94□□□□□ -1.46
PDLIM5-217ENST00000512274 K7EQZ3 153 aa5.93□□□□□ -1.46
PDLIM5-217ENST00000512274 NDUFB1O75438 58 aa5.93□□□□□ -1.46
PDLIM5-217ENST00000512274 C4orf48Q5BLP8 95 aa5.93□□□□□ -1.46
PDLIM5-217ENST00000512274 HRCT1Q6UXD1 115 aa5.91□□□□□ -1.46
PDLIM5-217ENST00000512274 KRTAP4-12Q9BQ66 201 aa5.91□□□□□ -1.46
PDLIM5-217ENST00000512274 KRTAP9-9Q9BYP9 154 aa5.91□□□□□ -1.46
PDLIM5-217ENST00000512274 KRTAP9-4Q9BYQ2 154 aa5.91□□□□□ -1.46
PDLIM5-217ENST00000512274 C1orf195Q5TG92 126 aa5.9□□□□□ -1.46
PDLIM5-217ENST00000512274 A0A1B0GVX0 72 aa5.89□□□□□ -1.47
PDLIM5-217ENST00000512274 HCG22E2RYF7 251 aa5.89□□□□□ -1.47
PDLIM5-217ENST00000512274 PCP4P48539 62 aa5.89□□□□□ -1.47
PDLIM5-217ENST00000512274 Q8N9L7 120 aa5.89□□□□□ -1.47
PDLIM5-217ENST00000512274 KRTAP4-8A0A0G2JLE6 195 aa5.88□□□□□ -1.47
PDLIM5-217ENST00000512274 C8orf87E5RJ46 101 aa5.88□□□□□ -1.47
PDLIM5-217ENST00000512274 ANAPC13Q9BS18 74 aa5.88□□□□□ -1.47
PDLIM5-217ENST00000512274 KRTAP4-1Q9BYQ7 146 aa5.88□□□□□ -1.47
PDLIM5-217ENST00000512274 TPRXLQ17RH7 258 aa5.87□□□□□ -1.47
PDLIM5-217ENST00000512274 DEFB116Q30KQ4 102 aa5.87□□□□□ -1.47
PDLIM5-217ENST00000512274 SERP2Q8N6R1 65 aa5.87□□□□□ -1.47
PDLIM5-217ENST00000512274 IGLV7-46A0A075B6I9 117 aa5.86□□□□□ -1.47
PDLIM5-217ENST00000512274 TRAV7A0A075B6U4 112 aa5.86□□□□□ -1.47
PDLIM5-217ENST00000512274 MMP24-AS1A0A0U1RRL7 71 aa5.86□□□□□ -1.47
PDLIM5-217ENST00000512274 MUC17Q685J3 4493 aa5.85□□□□□ -1.47
PDLIM5-217ENST00000512274 OCR1Q9BZK8 76 aa5.85□□□□□ -1.47
PDLIM5-217ENST00000512274 C8orf17Q9NRJ1 99 aa5.85□□□□□ -1.47
PDLIM5-217ENST00000512274 UQCRQO14949 82 aa5.84□□□□□ -1.47
PDLIM5-217ENST00000512274 COX7CP15954 63 aa5.84□□□□□ -1.47
PDLIM5-217ENST00000512274 CASC2Q6XLA1 102 aa5.83□□□□□ -1.48
PDLIM5-217ENST00000512274 TMEM254Q8TBM7 123 aa5.83□□□□□ -1.48
PDLIM5-217ENST00000512274 hDV103S1A0JD37 113 aa5.82□□□□□ -1.48
PDLIM5-217ENST00000512274 TP53AIP1Q9HCN2 124 aa5.8□□□□□ -1.48
PDLIM5-217ENST00000512274 IGHV6-1A0A0B4J1U7 121 aa5.79□□□□□ -1.48
PDLIM5-217ENST00000512274 FP248Q71RG6 208 aaPredicted RBP5.79□□□□□ -1.48
PDLIM5-217ENST00000512274 MRPL34Q9BQ48 92 aaKnown RBP5.78□□□□□ -1.48
PDLIM5-217ENST00000512274 LINC00313P59037 77 aa5.77□□□□□ -1.49
PDLIM5-217ENST00000512274 MT1HP80294 61 aa5.77□□□□□ -1.49
PDLIM5-217ENST00000512274 C5orf47Q569G3 176 aa5.77□□□□□ -1.49
PDLIM5-217ENST00000512274 WFDC13Q8IUB5 93 aa5.77□□□□□ -1.49
PDLIM5-217ENST00000512274 Q8N9P0 234 aaPredicted RBP5.77□□□□□ -1.49
PDLIM5-217ENST00000512274 H3BPC8 53 aa5.76□□□□□ -1.49
PDLIM5-217ENST00000512274 KLKP1Q107X0 134 aa5.76□□□□□ -1.49
PDLIM5-217ENST00000512274 KRTAP16-1A8MUX0 517 aa5.75□□□□□ -1.49
PDLIM5-217ENST00000512274 NOTCH2NLQ7Z3S9 236 aa5.75□□□□□ -1.49
PDLIM5-217ENST00000512274 KRTAP10-6P60371 365 aaPredicted RBP5.74□□□□□ -1.49
PDLIM5-217ENST00000512274 CCDC179H3BU77 68 aa5.72□□□□□ -1.49
PDLIM5-217ENST00000512274 SEC61BP60468 96 aaKnown RBP5.72□□□□□ -1.49
PDLIM5-217ENST00000512274 KRTAP19-1Q8IUB9 90 aa5.71□□□□□ -1.5
PDLIM5-217ENST00000512274 NDUFC1O43677 76 aa5.7□□□□□ -1.5
PDLIM5-217ENST00000512274 ZCCHC13Q8WW36 166 aaKnown RBP5.7□□□□□ -1.5
PDLIM5-217ENST00000512274 KRTAP4-7Q9BYR0 210 aa5.7□□□□□ -1.5
PDLIM5-217ENST00000512274 TRAV22A0A0B4J277 110 aa5.69□□□□□ -1.5
PDLIM5-217ENST00000512274 KRTAP19-2Q3LHN2 52 aa5.69□□□□□ -1.5
PDLIM5-217ENST00000512274 KRTAP13-3Q3SY46 172 aa5.69□□□□□ -1.5
PDLIM5-217ENST00000512274 C20orf166-AS1Q96NR2 134 aa5.69□□□□□ -1.5
PDLIM5-217ENST00000512274 MP68P56378 58 aa5.68□□□□□ -1.5
PDLIM5-217ENST00000512274 C20orf197Q8N268 126 aa5.68□□□□□ -1.5
PDLIM5-217ENST00000512274 A8MUU9 505 aa5.67□□□□□ -1.5
PDLIM5-217ENST00000512274 M0R2T5 61 aa5.65□□□□□ -1.5
PDLIM5-217ENST00000512274 H0Y9P7 68 aa5.64□□□□□ -1.51
PDLIM5-217ENST00000512274 H7BZZ5 65 aa5.63□□□□□ -1.51
PDLIM5-217ENST00000512274 NDUFS5O43920 106 aa5.63□□□□□ -1.51
PDLIM5-217ENST00000512274 TMEM258P61165 79 aa5.63□□□□□ -1.51
PDLIM5-217ENST00000512274 Q75L30 129 aa5.63□□□□□ -1.51
PDLIM5-217ENST00000512274 LOC101927531A0A1B0GV80 90 aa5.62□□□□□ -1.51
PDLIM5-217ENST00000512274 LCE1DQ5T752 114 aa5.61□□□□□ -1.51
PDLIM5-217ENST00000512274 Q5W150 140 aa5.6□□□□□ -1.51
PDLIM5-217ENST00000512274 C1orf64Q8NEQ6 169 aa5.6□□□□□ -1.51
PDLIM5-217ENST00000512274 CYSTM1Q9H1C7 97 aa5.6□□□□□ -1.51
PDLIM5-217ENST00000512274 C9orf92A6NGG3 77 aa5.59□□□□□ -1.51
PDLIM5-217ENST00000512274 ATP5EP56381 51 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms