RNA–Protein interactions for RNA: ENST00000511985.1

PDGFC-207, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-207ENST00000511985 ZANQ9Y493 2812 aa-0.24□□□□□ -2.45
PDGFC-207ENST00000511985 FCER1GP30273 86 aa-0.25□□□□□ -2.45
PDGFC-207ENST00000511985 MROH1Q8NDA8 1641 aa-0.25□□□□□ -2.45
PDGFC-207ENST00000511985 HIVEP1P15822 2718 aa-0.25□□□□□ -2.45
PDGFC-207ENST00000511985 DOPEY1Q5JWR5 2465 aa-0.26□□□□□ -2.45
PDGFC-207ENST00000511985 IGLV5-48A0A075B6I7 105 aa-0.26□□□□□ -2.45
PDGFC-207ENST00000511985 SERF2P84101 59 aa-0.26□□□□□ -2.45
PDGFC-207ENST00000511985 KRTAP19-8Q3LI54 63 aa-0.26□□□□□ -2.45
PDGFC-207ENST00000511985 APOBP04114 4563 aaKnown RBP-0.26□□□□□ -2.45
PDGFC-207ENST00000511985 KIF1AQ12756 1690 aa-0.27□□□□□ -2.45
PDGFC-207ENST00000511985 ABCA6Q8N139 1617 aa-0.27□□□□□ -2.45
PDGFC-207ENST00000511985 NBASA2RRP1 2371 aa-0.27□□□□□ -2.45
PDGFC-207ENST00000511985 IGIPA6NJ69 53 aa-0.27□□□□□ -2.45
PDGFC-207ENST00000511985 M0R1W7 72 aa-0.27□□□□□ -2.45
PDGFC-207ENST00000511985 TNRC18O15417 2968 aaPredicted RBP-0.27□□□□□ -2.45
PDGFC-207ENST00000511985 KRTAP20-2Q3LI61 65 aa-0.27□□□□□ -2.45
PDGFC-207ENST00000511985 NMES1Q9C002 83 aa-0.27□□□□□ -2.45
PDGFC-207ENST00000511985 STARD9Q9P2P6 4700 aa-0.27□□□□□ -2.45
PDGFC-207ENST00000511985 PKHD1L1Q86WI1 4243 aa-0.27□□□□□ -2.45
PDGFC-207ENST00000511985 TIAM1Q13009 1591 aa-0.28□□□□□ -2.45
PDGFC-207ENST00000511985 SFTA3P0C7M3 94 aa-0.28□□□□□ -2.45
PDGFC-207ENST00000511985 S100ZQ8WXG8 99 aa-0.28□□□□□ -2.45
PDGFC-207ENST00000511985 VPS13DQ5THJ4 4388 aa-0.29□□□□□ -2.46
PDGFC-207ENST00000511985 STAB2Q8WWQ8 2551 aa-0.29□□□□□ -2.46
PDGFC-207ENST00000511985 DSPP15924 2871 aaKnown RBP-0.29□□□□□ -2.46
PDGFC-207ENST00000511985 TOGARAM1Q9Y4F4 1720 aa-0.29□□□□□ -2.46
PDGFC-207ENST00000511985 PDZD2O15018 2839 aa-0.29□□□□□ -2.46
PDGFC-207ENST00000511985 NF1P21359 2839 aa-0.29□□□□□ -2.46
PDGFC-207ENST00000511985 DEFB110Q30KQ9 67 aa-0.29□□□□□ -2.46
PDGFC-207ENST00000511985 GLI2P10070 1586 aa-0.29□□□□□ -2.46
PDGFC-207ENST00000511985 DNAH11Q96DT5 4516 aa-0.29□□□□□ -2.46
PDGFC-207ENST00000511985 CCDC180Q9P1Z9 1646 aa-0.3□□□□□ -2.46
PDGFC-207ENST00000511985 CUBNO60494 3623 aa-0.3□□□□□ -2.46
PDGFC-207ENST00000511985 MMP24-AS1A0A0U1RRL7 71 aa-0.3□□□□□ -2.46
PDGFC-207ENST00000511985 MT4P47944 62 aa-0.3□□□□□ -2.46
PDGFC-207ENST00000511985 SMIM5Q71RC9 77 aa-0.3□□□□□ -2.46
PDGFC-207ENST00000511985 NOP10Q9NPE3 64 aaKnown RBP-0.3□□□□□ -2.46
PDGFC-207ENST00000511985 TMEM167BQ9NRX6 74 aa-0.3□□□□□ -2.46
PDGFC-207ENST00000511985 TEP1Q99973 2627 aaKnown RBP-0.3□□□□□ -2.46
PDGFC-207ENST00000511985 MUC17Q685J3 4493 aa-0.3□□□□□ -2.46
PDGFC-207ENST00000511985 EEA1Q15075 1411 aa-0.3□□□□□ -2.46
PDGFC-207ENST00000511985 DNHD1Q96M86 4753 aa-0.3□□□□□ -2.46
PDGFC-207ENST00000511985 LAMA5O15230 3695 aa-0.31□□□□□ -2.46
PDGFC-207ENST00000511985 PKD1L2Q7Z442 2459 aa-0.31□□□□□ -2.46
PDGFC-207ENST00000511985 ABCA10Q8WWZ4 1543 aa-0.31□□□□□ -2.46
PDGFC-207ENST00000511985 NBEAL1Q6ZS30 2694 aa-0.31□□□□□ -2.46
PDGFC-207ENST00000511985 PRRC2CQ9Y520 2896 aaKnown RBP-0.31□□□□□ -2.46
PDGFC-207ENST00000511985 CPS1P31327 1500 aa-0.32□□□□□ -2.46
PDGFC-207ENST00000511985 KRTAP20-1Q3LI63 56 aa-0.32□□□□□ -2.46
PDGFC-207ENST00000511985 LINC00308Q8TCZ7 52 aa-0.32□□□□□ -2.46
PDGFC-207ENST00000511985 DNAH6Q9C0G6 4158 aa-0.32□□□□□ -2.46
PDGFC-207ENST00000511985 NBEAL2Q6ZNJ1 2754 aa-0.32□□□□□ -2.46
PDGFC-207ENST00000511985 BIRC6Q9NR09 4857 aa-0.32□□□□□ -2.46
PDGFC-207ENST00000511985 EPG5Q9HCE0 2579 aa-0.32□□□□□ -2.46
PDGFC-207ENST00000511985 SACSQ9NZJ4 4579 aa-0.32□□□□□ -2.46
PDGFC-207ENST00000511985 TNP1P09430 55 aa-0.33□□□□□ -2.46
PDGFC-207ENST00000511985 SPG11Q96JI7 2443 aa-0.33□□□□□ -2.46
PDGFC-207ENST00000511985 LY75O60449 1722 aa-0.33□□□□□ -2.46
PDGFC-207ENST00000511985 ERICH3Q5RHP9 1530 aa-0.33□□□□□ -2.46
PDGFC-207ENST00000511985 DNAH2Q9P225 4427 aa-0.34□□□□□ -2.46
PDGFC-207ENST00000511985 ANKRD36CQ5JPF3 1778 aa-0.34□□□□□ -2.46
PDGFC-207ENST00000511985 MTORP42345 2549 aa-0.34□□□□□ -2.46
PDGFC-207ENST00000511985 H0YGX0 51 aa-0.34□□□□□ -2.46
PDGFC-207ENST00000511985 KRTAP19-5Q3LI72 72 aa-0.34□□□□□ -2.46
PDGFC-207ENST00000511985 CROCC2H7BZ55 1655 aa-0.34□□□□□ -2.46
PDGFC-207ENST00000511985 MAP1AP78559 2803 aaPredicted RBP-0.34□□□□□ -2.46
PDGFC-207ENST00000511985 LYSTQ99698 3801 aa-0.34□□□□□ -2.46
PDGFC-207ENST00000511985 FASNP49327 2511 aaKnown RBP-0.34□□□□□ -2.46
PDGFC-207ENST00000511985 PRXQ9BXM0 1461 aa-0.35□□□□□ -2.46
PDGFC-207ENST00000511985 UGGT1Q9NYU2 1555 aa-0.35□□□□□ -2.47
PDGFC-207ENST00000511985 MAST1Q9Y2H9 1570 aa-0.35□□□□□ -2.47
PDGFC-207ENST00000511985 DNAH3Q8TD57 4116 aa-0.35□□□□□ -2.47
PDGFC-207ENST00000511985 COL6A5A8TX70 2615 aa-0.35□□□□□ -2.47
PDGFC-207ENST00000511985 CEP290O15078 2479 aa-0.36□□□□□ -2.47
PDGFC-207ENST00000511985 ALS2Q96Q42 1657 aa-0.36□□□□□ -2.47
PDGFC-207ENST00000511985 ABRACLQ9P1F3 81 aa-0.36□□□□□ -2.47
PDGFC-207ENST00000511985 VPS13BQ7Z7G8 4022 aa-0.36□□□□□ -2.47
PDGFC-207ENST00000511985 TGP01266 2768 aa-0.36□□□□□ -2.47
PDGFC-207ENST00000511985 COL12A1Q99715 3063 aa-0.37□□□□□ -2.47
PDGFC-207ENST00000511985 CDC42BPAQ5VT25 1732 aa-0.37□□□□□ -2.47
PDGFC-207ENST00000511985 NBPF19A0A087WUL8 3843 aa-0.37□□□□□ -2.47
PDGFC-207ENST00000511985 M0QY20 66 aa-0.37□□□□□ -2.47
PDGFC-207ENST00000511985 KRTAP8-1Q8IUC2 63 aa-0.37□□□□□ -2.47
PDGFC-207ENST00000511985 ANKRD11Q6UB99 2663 aaPredicted RBP-0.37□□□□□ -2.47
PDGFC-207ENST00000511985 SMIM27A0A1W2PRY6 76 aa-0.38□□□□□ -2.47
PDGFC-207ENST00000511985 A8MTW9 85 aa-0.38□□□□□ -2.47
PDGFC-207ENST00000511985 M0QZ58 72 aa-0.38□□□□□ -2.47
PDGFC-207ENST00000511985 MT1HP80294 61 aa-0.38□□□□□ -2.47
PDGFC-207ENST00000511985 CLPSL2Q6UWE3 100 aa-0.38□□□□□ -2.47
PDGFC-207ENST00000511985 KAAG1Q9UBP8 84 aa-0.38□□□□□ -2.47
PDGFC-207ENST00000511985 LAMA2P24043 3122 aaKnown RBP-0.38□□□□□ -2.47
PDGFC-207ENST00000511985 MXRA5Q9NR99 2828 aa-0.38□□□□□ -2.47
PDGFC-207ENST00000511985 AGLP35573 1532 aa-0.38□□□□□ -2.47
PDGFC-207ENST00000511985 GCN1Q92616 2671 aaKnown RBP-0.39□□□□□ -2.47
PDGFC-207ENST00000511985 DMXL1Q9Y485 3027 aa-0.39□□□□□ -2.47
PDGFC-207ENST00000511985 BPTFQ12830 3046 aa-0.39□□□□□ -2.47
PDGFC-207ENST00000511985 PLECQ15149 4684 aaKnown RBP-0.4□□□□□ -2.47
PDGFC-207ENST00000511985 DNAH8Q96JB1 4490 aa-0.4□□□□□ -2.47
PDGFC-207ENST00000511985 SMR3BP02814 79 aaPredicted RBP-0.4□□□□□ -2.47
PDGFC-207ENST00000511985 PLNP26678 52 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms