RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 WT1-ASQ06250 92 aa-0.4□□□□□ -2.47
CHD1-207ENST00000511628 ATXN8Q156A1 80 aa-0.4□□□□□ -2.47
CHD1-207ENST00000511628 COL6A5A8TX70 2615 aa-0.41□□□□□ -2.47
CHD1-207ENST00000511628 HERC2O95714 4834 aa-0.41□□□□□ -2.47
CHD1-207ENST00000511628 LMTK2Q8IWU2 1503 aa-0.41□□□□□ -2.48
CHD1-207ENST00000511628 MINOS1Q5TGZ0 78 aa-0.41□□□□□ -2.48
CHD1-207ENST00000511628 STARD9Q9P2P6 4700 aa-0.41□□□□□ -2.48
CHD1-207ENST00000511628 LYSTQ99698 3801 aa-0.41□□□□□ -2.48
CHD1-207ENST00000511628 NBEAL2Q6ZNJ1 2754 aa-0.41□□□□□ -2.48
CHD1-207ENST00000511628 TJP1Q07157 1748 aa-0.41□□□□□ -2.48
CHD1-207ENST00000511628 GCN1Q92616 2671 aaKnown RBP-0.41□□□□□ -2.48
CHD1-207ENST00000511628 ZC3H13Q5T200 1668 aaKnown RBP-0.42□□□□□ -2.48
CHD1-207ENST00000511628 ITPR3Q14573 2671 aa-0.42□□□□□ -2.48
CHD1-207ENST00000511628 ANK3Q12955 4377 aaKnown RBP-0.42□□□□□ -2.48
CHD1-207ENST00000511628 DEFB110Q30KQ9 67 aa-0.42□□□□□ -2.48
CHD1-207ENST00000511628 INO80Q9ULG1 1556 aaPredicted RBP-0.42□□□□□ -2.48
CHD1-207ENST00000511628 AKAP9Q99996 3911 aa-0.43□□□□□ -2.48
CHD1-207ENST00000511628 RIF1Q5UIP0 2472 aaKnown RBP-0.43□□□□□ -2.48
CHD1-207ENST00000511628 MMP24-AS1A0A0U1RRL7 71 aa-0.43□□□□□ -2.48
CHD1-207ENST00000511628 PKHD1L1Q86WI1 4243 aa-0.43□□□□□ -2.48
CHD1-207ENST00000511628 LRRIQ1Q96JM4 1722 aa-0.44□□□□□ -2.48
CHD1-207ENST00000511628 ACACBO00763 2458 aa-0.44□□□□□ -2.48
CHD1-207ENST00000511628 MUC17Q685J3 4493 aa-0.44□□□□□ -2.48
CHD1-207ENST00000511628 RNF17Q9BXT8 1623 aaKnown RBP-0.44□□□□□ -2.48
CHD1-207ENST00000511628 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.44□□□□□ -2.48
CHD1-207ENST00000511628 NOP10Q9NPE3 64 aaKnown RBP-0.44□□□□□ -2.48
CHD1-207ENST00000511628 GNG13Q9P2W3 67 aa-0.44□□□□□ -2.48
CHD1-207ENST00000511628 C6orf48Q9UBA6 75 aa-0.44□□□□□ -2.48
CHD1-207ENST00000511628 DNAH11Q96DT5 4516 aa-0.44□□□□□ -2.48
CHD1-207ENST00000511628 IGLV5-48A0A075B6I7 105 aa-0.45□□□□□ -2.48
CHD1-207ENST00000511628 PDCD5O14737 125 aa-0.45□□□□□ -2.48
CHD1-207ENST00000511628 KALRNO60229 2985 aa-0.45□□□□□ -2.48
CHD1-207ENST00000511628 RPS27P42677 84 aaKnown RBP-0.45□□□□□ -2.48
CHD1-207ENST00000511628 RPS27LQ71UM5 84 aaKnown RBP-0.45□□□□□ -2.48
CHD1-207ENST00000511628 SMCO4Q9NRQ5 59 aa-0.45□□□□□ -2.48
CHD1-207ENST00000511628 NRAPQ86VF7 1730 aa-0.45□□□□□ -2.48
CHD1-207ENST00000511628 ABCA8O94911 1581 aa-0.45□□□□□ -2.48
CHD1-207ENST00000511628 NBPF19A0A087WUL8 3843 aa-0.46□□□□□ -2.48
CHD1-207ENST00000511628 K7EMI3 77 aa-0.46□□□□□ -2.48
CHD1-207ENST00000511628 DNAH3Q8TD57 4116 aa-0.46□□□□□ -2.48
CHD1-207ENST00000511628 LAMA2P24043 3122 aaKnown RBP-0.46□□□□□ -2.48
CHD1-207ENST00000511628 USP9YO00507 2555 aaPredicted RBP-0.47□□□□□ -2.48
CHD1-207ENST00000511628 ANKRD36CQ5JPF3 1778 aa-0.47□□□□□ -2.48
CHD1-207ENST00000511628 DUOX2Q9NRD8 1548 aa-0.47□□□□□ -2.48
CHD1-207ENST00000511628 DIP2AQ14689 1571 aa-0.47□□□□□ -2.48
CHD1-207ENST00000511628 TNP1P09430 55 aa-0.47□□□□□ -2.48
CHD1-207ENST00000511628 MT1HP80294 61 aa-0.47□□□□□ -2.48
CHD1-207ENST00000511628 KRTAP19-6Q3LI70 58 aa-0.47□□□□□ -2.48
CHD1-207ENST00000511628 TOGARAM1Q9Y4F4 1720 aa-0.47□□□□□ -2.49
CHD1-207ENST00000511628 DNMBPQ6XZF7 1577 aa-0.48□□□□□ -2.49
CHD1-207ENST00000511628 CELSR3Q9NYQ7 3312 aa-0.48□□□□□ -2.49
CHD1-207ENST00000511628 NHSQ6T4R5 1651 aa-0.48□□□□□ -2.49
CHD1-207ENST00000511628 ITSN2Q9NZM3 1697 aa-0.48□□□□□ -2.49
CHD1-207ENST00000511628 FCER1GP30273 86 aa-0.48□□□□□ -2.49
CHD1-207ENST00000511628 NCBP2-AS2Q69YL0 99 aa-0.48□□□□□ -2.49
CHD1-207ENST00000511628 ABCC6O95255 1503 aa-0.48□□□□□ -2.49
CHD1-207ENST00000511628 SCRIBQ14160 1630 aa-0.49□□□□□ -2.49
CHD1-207ENST00000511628 KIF1AQ12756 1690 aa-0.49□□□□□ -2.49
CHD1-207ENST00000511628 APOBP04114 4563 aaKnown RBP-0.49□□□□□ -2.49
CHD1-207ENST00000511628 PARP4Q9UKK3 1724 aaKnown RBP-0.49□□□□□ -2.49
CHD1-207ENST00000511628 SERF2P84101 59 aa-0.49□□□□□ -2.49
CHD1-207ENST00000511628 CLPSL2Q6UWE3 100 aa-0.49□□□□□ -2.49
CHD1-207ENST00000511628 HILPDAQ9Y5L2 63 aa-0.49□□□□□ -2.49
CHD1-207ENST00000511628 TRIOO75962 3097 aa-0.49□□□□□ -2.49
CHD1-207ENST00000511628 COL12A1Q99715 3063 aa-0.5□□□□□ -2.49
CHD1-207ENST00000511628 DEFB1P60022 68 aa-0.5□□□□□ -2.49
CHD1-207ENST00000511628 USP9XQ93008 2570 aaPredicted RBP-0.5□□□□□ -2.49
CHD1-207ENST00000511628 UGGT2Q9NYU1 1516 aa-0.5□□□□□ -2.49
CHD1-207ENST00000511628 CDC42BPGQ6DT37 1551 aa-0.5□□□□□ -2.49
CHD1-207ENST00000511628 RANBP2P49792 3224 aaKnown RBP-0.5□□□□□ -2.49
CHD1-207ENST00000511628 RELNP78509 3460 aa-0.51□□□□□ -2.49
CHD1-207ENST00000511628 DNAH1Q9P2D7 4330 aa-0.51□□□□□ -2.49
CHD1-207ENST00000511628 TLN2Q9Y4G6 2542 aa-0.51□□□□□ -2.49
CHD1-207ENST00000511628 MYO5CQ9NQX4 1742 aa-0.52□□□□□ -2.49
CHD1-207ENST00000511628 DNHD1Q96M86 4753 aa-0.52□□□□□ -2.49
CHD1-207ENST00000511628 DNAH2Q9P225 4427 aa-0.52□□□□□ -2.49
CHD1-207ENST00000511628 A0A0C4DFX4 3053 aa-0.52□□□□□ -2.49
CHD1-207ENST00000511628 VPS13BQ7Z7G8 4022 aa-0.52□□□□□ -2.49
CHD1-207ENST00000511628 NIPBLQ6KC79 2804 aaeCLIP-0.52□□□□□ -2.49
CHD1-207ENST00000511628 C3P01024 1663 aa-0.53□□□□□ -2.49
CHD1-207ENST00000511628 CLASP1Q7Z460 1538 aa-0.53□□□□□ -2.49
CHD1-207ENST00000511628 WDR87Q6ZQQ6 2873 aa-0.53□□□□□ -2.49
CHD1-207ENST00000511628 LINC01549A6NIU2 74 aa-0.53□□□□□ -2.49
CHD1-207ENST00000511628 KRTAP19-5Q3LI72 72 aa-0.53□□□□□ -2.49
CHD1-207ENST00000511628 NMES1Q9C002 83 aa-0.53□□□□□ -2.49
CHD1-207ENST00000511628 ABRACLQ9P1F3 81 aa-0.53□□□□□ -2.49
CHD1-207ENST00000511628 MROH1Q8NDA8 1641 aa-0.53□□□□□ -2.49
CHD1-207ENST00000511628 ASXL1Q8IXJ9 1541 aa-0.54□□□□□ -2.5
CHD1-207ENST00000511628 SACSQ9NZJ4 4579 aa-0.54□□□□□ -2.5
CHD1-207ENST00000511628 A8MTW9 85 aa-0.54□□□□□ -2.5
CHD1-207ENST00000511628 SFTA3P0C7M3 94 aa-0.54□□□□□ -2.5
CHD1-207ENST00000511628 DNAH8Q96JB1 4490 aa-0.55□□□□□ -2.5
CHD1-207ENST00000511628 M0QY20 66 aa-0.55□□□□□ -2.5
CHD1-207ENST00000511628 M0QZ58 72 aa-0.55□□□□□ -2.5
CHD1-207ENST00000511628 TMEM167BQ9NRX6 74 aa-0.55□□□□□ -2.5
CHD1-207ENST00000511628 FRYQ5TBA9 3013 aa-0.56□□□□□ -2.5
CHD1-207ENST00000511628 ABCA9Q8IUA7 1624 aa-0.56□□□□□ -2.5
CHD1-207ENST00000511628 KRTAP8-1Q8IUC2 63 aa-0.56□□□□□ -2.5
CHD1-207ENST00000511628 LY75O60449 1722 aa-0.56□□□□□ -2.5
CHD1-207ENST00000511628 IQGAP3Q86VI3 1631 aa-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms