RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 DEFB116Q30KQ4 102 aa4.13□□□□□ -1.75
TRIO-217ENST00000511019 LCE5AQ5TCM9 118 aa4.13□□□□□ -1.75
TRIO-217ENST00000511019 NOTCH2NLQ7Z3S9 236 aa4.13□□□□□ -1.75
TRIO-217ENST00000511019 MTURNQ8N3F0 131 aa4.13□□□□□ -1.75
TRIO-217ENST00000511019 MPLKIPQ8TAP9 179 aa4.13□□□□□ -1.75
TRIO-217ENST00000511019 KRTAP9-3Q9BYQ3 159 aa4.13□□□□□ -1.75
TRIO-217ENST00000511019 MACF1Q9UPN3 7388 aaKnown RBP4.13□□□□□ -1.75
TRIO-217ENST00000511019 H3BQ85 93 aa4.12□□□□□ -1.75
TRIO-217ENST00000511019 IGHV6-1A0A0B4J1U7 121 aa4.11□□□□□ -1.75
TRIO-217ENST00000511019 CEND1Q8N111 149 aa4.11□□□□□ -1.75
TRIO-217ENST00000511019 LINC00472Q9H8W2 130 aa4.11□□□□□ -1.75
TRIO-217ENST00000511019 LINC00846Q9NV44 126 aa4.11□□□□□ -1.75
TRIO-217ENST00000511019 A0A1B0GV72 72 aa4.1□□□□□ -1.75
TRIO-217ENST00000511019 TMEM256-PLSCR3K7ERE1 68 aa4.1□□□□□ -1.75
TRIO-217ENST00000511019 DNAL4O96015 105 aa4.1□□□□□ -1.75
TRIO-217ENST00000511019 SPATA45Q537H7 98 aa4.1□□□□□ -1.75
TRIO-217ENST00000511019 ORMDL1Q9P0S3 153 aa4.1□□□□□ -1.75
TRIO-217ENST00000511019 PAM16Q9Y3D7 125 aa4.1□□□□□ -1.75
TRIO-217ENST00000511019 C8orf87E5RJ46 101 aa4.09□□□□□ -1.75
TRIO-217ENST00000511019 TRACP01848 142 aa4.09□□□□□ -1.75
TRIO-217ENST00000511019 CCKP06307 115 aa4.09□□□□□ -1.75
TRIO-217ENST00000511019 S100A1P23297 94 aa4.09□□□□□ -1.75
TRIO-217ENST00000511019 C2orf91Q6ZV80 131 aa4.09□□□□□ -1.75
TRIO-217ENST00000511019 PSMB2P49721 201 aa4.08□□□□□ -1.76
TRIO-217ENST00000511019 FCGBPQ9Y6R7 5405 aaPredicted RBP4.08□□□□□ -1.76
TRIO-217ENST00000511019 COX6CP09669 75 aa4.07□□□□□ -1.76
TRIO-217ENST00000511019 SPINK7P58062 85 aa4.07□□□□□ -1.76
TRIO-217ENST00000511019 VAMP8Q9BV40 100 aa4.07□□□□□ -1.76
TRIO-217ENST00000511019 KRTAP4-11Q9BYQ6 195 aa4.07□□□□□ -1.76
TRIO-217ENST00000511019 SYNE2Q8WXH0 6885 aaKnown RBP4.06□□□□□ -1.76
TRIO-217ENST00000511019 A0A1B0GVX0 72 aa4.06□□□□□ -1.76
TRIO-217ENST00000511019 FXYD2P54710 66 aa4.06□□□□□ -1.76
TRIO-217ENST00000511019 UBE2V1Q13404 147 aa4.06□□□□□ -1.76
TRIO-217ENST00000511019 ZCCHC13Q8WW36 166 aaKnown RBP4.06□□□□□ -1.76
TRIO-217ENST00000511019 VPS25Q9BRG1 176 aa4.06□□□□□ -1.76
TRIO-217ENST00000511019 J3KT08 172 aa4.04□□□□□ -1.76
TRIO-217ENST00000511019 RBM3P98179 157 aaKnown RBP4.04□□□□□ -1.76
TRIO-217ENST00000511019 DSCR8Q96T75 97 aa4.04□□□□□ -1.76
TRIO-217ENST00000511019 KRTAP4-2Q9BYR5 136 aa4.04□□□□□ -1.76
TRIO-217ENST00000511019 A8MWP4 228 aa4.03□□□□□ -1.76
TRIO-217ENST00000511019 KRTAP19-6Q3LI70 58 aa4.03□□□□□ -1.76
TRIO-217ENST00000511019 NDUFB1O75438 58 aa4.02□□□□□ -1.77
TRIO-217ENST00000511019 LYRM7Q5U5X0 104 aa4.02□□□□□ -1.77
TRIO-217ENST00000511019 K7ERJ3 54 aa4.01□□□□□ -1.77
TRIO-217ENST00000511019 SCGB1C2P0DMR2 95 aa4.01□□□□□ -1.77
TRIO-217ENST00000511019 PCP4P48539 62 aa4.01□□□□□ -1.77
TRIO-217ENST00000511019 HSD52Q0P140 79 aa4.01□□□□□ -1.77
TRIO-217ENST00000511019 Q8N9P0 234 aaPredicted RBP4.01□□□□□ -1.77
TRIO-217ENST00000511019 C9JAW5 83 aa4□□□□□ -1.77
TRIO-217ENST00000511019 Q6ZQT0 140 aa3.99□□□□□ -1.77
TRIO-217ENST00000511019 WFDC13Q8IUB5 93 aa3.99□□□□□ -1.77
TRIO-217ENST00000511019 BAALC-AS2P0C853 105 aa3.98□□□□□ -1.77
TRIO-217ENST00000511019 C8orf17Q9NRJ1 99 aa3.97□□□□□ -1.77
TRIO-217ENST00000511019 KRTAP6-3Q3LI67 103 aa3.95□□□□□ -1.78
TRIO-217ENST00000511019 IGKV3D-7A0A0C4DH55 119 aa3.94□□□□□ -1.78
TRIO-217ENST00000511019 A0A1B0GW54 56 aa3.94□□□□□ -1.78
TRIO-217ENST00000511019 H1FX-AS1Q4G0G2 97 aa3.94□□□□□ -1.78
TRIO-217ENST00000511019 Q6ZVQ6 151 aa3.94□□□□□ -1.78
TRIO-217ENST00000511019 JMJD7-PLA2G4BH0Y9G9 81 aa3.93□□□□□ -1.78
TRIO-217ENST00000511019 PYY3Q5JQD4 70 aa3.93□□□□□ -1.78
TRIO-217ENST00000511019 UQCR10Q9UDW1 63 aa3.93□□□□□ -1.78
TRIO-217ENST00000511019 PDE6GP18545 87 aa3.92□□□□□ -1.78
TRIO-217ENST00000511019 LOC110117498A0A087WWA1 95 aa3.91□□□□□ -1.78
TRIO-217ENST00000511019 PRR15Q8IV56 129 aa3.91□□□□□ -1.78
TRIO-217ENST00000511019 MRPL34Q9BQ48 92 aaKnown RBP3.91□□□□□ -1.78
TRIO-217ENST00000511019 NREPQ16612 68 aa3.9□□□□□ -1.79
TRIO-217ENST00000511019 NDUFS5O43920 106 aa3.89□□□□□ -1.79
TRIO-217ENST00000511019 ATXN8Q156A1 80 aa3.89□□□□□ -1.79
TRIO-217ENST00000511019 TMEM254Q8TBM7 123 aa3.89□□□□□ -1.79
TRIO-217ENST00000511019 MMP24-AS1A0A0U1RRL7 71 aa3.87□□□□□ -1.79
TRIO-217ENST00000511019 hDV103S1A0JD37 113 aa3.87□□□□□ -1.79
TRIO-217ENST00000511019 C14orf132Q9NPU4 83 aa3.87□□□□□ -1.79
TRIO-217ENST00000511019 IGKV2D-30A0A075B6S6 120 aa3.86□□□□□ -1.79
TRIO-217ENST00000511019 IGKV2-30P06310 120 aa3.86□□□□□ -1.79
TRIO-217ENST00000511019 C7orf65Q6ZTY9 151 aa3.84□□□□□ -1.79
TRIO-217ENST00000511019 NAA38Q9BRA0 125 aaKnown RBP3.84□□□□□ -1.79
TRIO-217ENST00000511019 K7EQZ3 153 aa3.83□□□□□ -1.8
TRIO-217ENST00000511019 KRTAP15-1Q3LI76 137 aa3.83□□□□□ -1.8
TRIO-217ENST00000511019 Q5W150 140 aa3.83□□□□□ -1.8
TRIO-217ENST00000511019 A6NN06 94 aa3.82□□□□□ -1.8
TRIO-217ENST00000511019 M0R143 59 aa3.82□□□□□ -1.8
TRIO-217ENST00000511019 NEBP20929 6669 aa3.81□□□□□ -1.8
TRIO-217ENST00000511019 BPY2O14599 106 aa3.81□□□□□ -1.8
TRIO-217ENST00000511019 C4orf26Q17RF5 130 aa3.81□□□□□ -1.8
TRIO-217ENST00000511019 FAM236AA0A1B0GUQ0 79 aa3.8□□□□□ -1.8
TRIO-217ENST00000511019 FAM236BA0A1B0GV22 79 aa3.8□□□□□ -1.8
TRIO-217ENST00000511019 C5orf47Q569G3 176 aa3.8□□□□□ -1.8
TRIO-217ENST00000511019 HCG22E2RYF7 251 aa3.79□□□□□ -1.8
TRIO-217ENST00000511019 Q5VV11 94 aa3.78□□□□□ -1.8
TRIO-217ENST00000511019 CASC2Q6XLA1 102 aa3.78□□□□□ -1.8
TRIO-217ENST00000511019 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
TRIO-217ENST00000511019 CSAG1Q6PB30 78 aa3.77□□□□□ -1.81
TRIO-217ENST00000511019 MT1BP07438 61 aa3.76□□□□□ -1.81
TRIO-217ENST00000511019 CXCL6P80162 114 aa3.76□□□□□ -1.81
TRIO-217ENST00000511019 TSTD3H0UI37 97 aa3.75□□□□□ -1.81
TRIO-217ENST00000511019 Q8N9L7 120 aa3.75□□□□□ -1.81
TRIO-217ENST00000511019 H3BT86 120 aa3.74□□□□□ -1.81
TRIO-217ENST00000511019 KRTAP19-8Q3LI54 63 aa3.74□□□□□ -1.81
TRIO-217ENST00000511019 SPRR2GQ9BYE4 73 aa3.74□□□□□ -1.81
TRIO-217ENST00000511019 S4R3F8 94 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms