RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, human

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD2-208	ENST00000510676	MT1X	P80297	61 aa		4.49	□□□□□ -1.69
PTCD2-208	ENST00000510676	CHCHD1	Q96BP2	118 aa	Known RBP	4.49	□□□□□ -1.69
PTCD2-208	ENST00000510676	PRO2289	Q9P1D8	64 aa		4.49	□□□□□ -1.69
PTCD2-208	ENST00000510676	IGHV6-1	A0A0B4J1U7	121 aa		4.48	□□□□□ -1.69
PTCD2-208	ENST00000510676	hADV29S1	A0JD25	119 aa		4.48	□□□□□ -1.69
PTCD2-208	ENST00000510676		E9PLD3	99 aa		4.48	□□□□□ -1.69
PTCD2-208	ENST00000510676	S100P	P25815	95 aa		4.48	□□□□□ -1.69
PTCD2-208	ENST00000510676	SNHG12	Q9BXW3	62 aa		4.48	□□□□□ -1.69
PTCD2-208	ENST00000510676	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	4.47	□□□□□ -1.69
PTCD2-208	ENST00000510676		V9GYY9	64 aa		4.47	□□□□□ -1.69
PTCD2-208	ENST00000510676	KLKP1	Q107X0	134 aa		4.46	□□□□□ -1.7
PTCD2-208	ENST00000510676	IGKC	P01834	107 aa		4.45	□□□□□ -1.7
PTCD2-208	ENST00000510676	C5orf47	Q569G3	176 aa		4.45	□□□□□ -1.7
PTCD2-208	ENST00000510676	C8orf87	E5RJ46	101 aa		4.44	□□□□□ -1.7
PTCD2-208	ENST00000510676	NDUFV3	P56181	108 aa	Known RBP	4.44	□□□□□ -1.7
PTCD2-208	ENST00000510676	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.44	□□□□□ -1.7
PTCD2-208	ENST00000510676	TRAPPC1	Q9Y5R8	145 aa		4.44	□□□□□ -1.7
PTCD2-208	ENST00000510676	LINC00472	Q9H8W2	130 aa		4.43	□□□□□ -1.7
PTCD2-208	ENST00000510676	RAB37	Q96AX2	223 aa		4.42	□□□□□ -1.7
PTCD2-208	ENST00000510676	PMCHL2	Q9BQD1	86 aa		4.42	□□□□□ -1.7
PTCD2-208	ENST00000510676	IGKV2-30	P06310	120 aa		4.41	□□□□□ -1.7
PTCD2-208	ENST00000510676	COPS9	Q8WXC6	57 aa		4.4	□□□□□ -1.71
PTCD2-208	ENST00000510676		A0A1B0GVX0	72 aa		4.39	□□□□□ -1.71
PTCD2-208	ENST00000510676	IFITM1	P13164	125 aa		4.39	□□□□□ -1.71
PTCD2-208	ENST00000510676	DEFB116	Q30KQ4	102 aa		4.39	□□□□□ -1.71
PTCD2-208	ENST00000510676	OCR1	Q9BZK8	76 aa		4.39	□□□□□ -1.71
PTCD2-208	ENST00000510676	SPRR5	A0A1B0GTR4	108 aa		4.38	□□□□□ -1.71
PTCD2-208	ENST00000510676	LEPROTL1	O95214	131 aa		4.38	□□□□□ -1.71
PTCD2-208	ENST00000510676	DSCR8	Q96T75	97 aa		4.38	□□□□□ -1.71
PTCD2-208	ENST00000510676	CRIPT	Q9P021	101 aa		4.38	□□□□□ -1.71
PTCD2-208	ENST00000510676	HSPB8	Q9UJY1	196 aa		4.38	□□□□□ -1.71
PTCD2-208	ENST00000510676	IGKV3D-7	A0A0C4DH55	119 aa		4.37	□□□□□ -1.71
PTCD2-208	ENST00000510676	MT4	P47944	62 aa		4.37	□□□□□ -1.71
PTCD2-208	ENST00000510676	KRTAP10-7	P60409	375 aa	Predicted RBP	4.36	□□□□□ -1.71
PTCD2-208	ENST00000510676	PRR15	Q8IV56	129 aa		4.35	□□□□□ -1.71
PTCD2-208	ENST00000510676	AHNAK	Q09666	5890 aa	Known RBP	4.35	□□□□□ -1.71
PTCD2-208	ENST00000510676	TRBV7-4	A0A0J9YYF1	115 aa		4.34	□□□□□ -1.71
PTCD2-208	ENST00000510676	TTTY13	Q9BZ97	58 aa		4.34	□□□□□ -1.71
PTCD2-208	ENST00000510676	CSAG1	Q6PB30	78 aa		4.33	□□□□□ -1.72
PTCD2-208	ENST00000510676	MUSTN1	Q8IVN3	82 aa		4.33	□□□□□ -1.72
PTCD2-208	ENST00000510676		H3BMG7	143 aa		4.31	□□□□□ -1.72
PTCD2-208	ENST00000510676	LYRM7	Q5U5X0	104 aa		4.31	□□□□□ -1.72
PTCD2-208	ENST00000510676	KRTAP5-11	Q6L8G4	156 aa		4.31	□□□□□ -1.72
PTCD2-208	ENST00000510676	C12orf57	Q99622	126 aa		4.31	□□□□□ -1.72
PTCD2-208	ENST00000510676	HIST1H4G	Q99525	98 aa		4.3	□□□□□ -1.72
PTCD2-208	ENST00000510676	LCA10	Q71F78	164 aa		4.29	□□□□□ -1.72
PTCD2-208	ENST00000510676	TMEM218	A2RU14	115 aa		4.28	□□□□□ -1.72
PTCD2-208	ENST00000510676	TRGC2	P03986	189 aa		4.28	□□□□□ -1.72
PTCD2-208	ENST00000510676	SCGB1D4	Q6XE38	83 aa		4.28	□□□□□ -1.72
PTCD2-208	ENST00000510676	FABP4	P15090	132 aa		4.26	□□□□□ -1.73
PTCD2-208	ENST00000510676	KRTAP10-12	P60413	245 aa		4.26	□□□□□ -1.73
PTCD2-208	ENST00000510676	BVES-AS1	Q5T3Y7	98 aa		4.26	□□□□□ -1.73
PTCD2-208	ENST00000510676	RBM3	P98179	157 aa	Known RBP	4.24	□□□□□ -1.73
PTCD2-208	ENST00000510676		S4R3F8	94 aa		4.24	□□□□□ -1.73
PTCD2-208	ENST00000510676	C2orf91	Q6ZV80	131 aa		4.22	□□□□□ -1.73
PTCD2-208	ENST00000510676	C4orf26	Q17RF5	130 aa		4.21	□□□□□ -1.74
PTCD2-208	ENST00000510676	ANKRD29	Q8N6D5	301 aa		4.21	□□□□□ -1.74
PTCD2-208	ENST00000510676	IGKV2D-30	A0A075B6S6	120 aa		4.2	□□□□□ -1.74
PTCD2-208	ENST00000510676		J3KT08	172 aa		4.2	□□□□□ -1.74
PTCD2-208	ENST00000510676	CXCL6	P80162	114 aa		4.2	□□□□□ -1.74
PTCD2-208	ENST00000510676	C8orf17	Q9NRJ1	99 aa		4.2	□□□□□ -1.74
PTCD2-208	ENST00000510676	FAM240A	A0A1B0GVK7	77 aa		4.19	□□□□□ -1.74
PTCD2-208	ENST00000510676	SYS1-DBNDD2	H3BUS1	97 aa		4.19	□□□□□ -1.74
PTCD2-208	ENST00000510676	LINC01545	Q5VT33	79 aa		4.19	□□□□□ -1.74
PTCD2-208	ENST00000510676	KRTAP5-4	Q6L8H1	288 aa		4.19	□□□□□ -1.74
PTCD2-208	ENST00000510676	C7orf65	Q6ZTY9	151 aa		4.19	□□□□□ -1.74
PTCD2-208	ENST00000510676	SNAPIN	O95295	136 aa		4.18	□□□□□ -1.74
PTCD2-208	ENST00000510676	TRAC	P01848	142 aa		4.18	□□□□□ -1.74
PTCD2-208	ENST00000510676	PLAC4	Q8WY50	150 aa		4.18	□□□□□ -1.74
PTCD2-208	ENST00000510676	MUC5AC	P98088	5654 aa		4.16	□□□□□ -1.74
PTCD2-208	ENST00000510676	SNCG	O76070	127 aa		4.16	□□□□□ -1.74
PTCD2-208	ENST00000510676	CCK	P06307	115 aa		4.16	□□□□□ -1.74
PTCD2-208	ENST00000510676	FABP2	P12104	132 aa		4.16	□□□□□ -1.74
PTCD2-208	ENST00000510676	YPEL4	Q96NS1	127 aa		4.16	□□□□□ -1.74
PTCD2-208	ENST00000510676	NDUFB1	O75438	58 aa		4.15	□□□□□ -1.75
PTCD2-208	ENST00000510676	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.14	□□□□□ -1.75
PTCD2-208	ENST00000510676		K7EQZ3	153 aa		4.14	□□□□□ -1.75
PTCD2-208	ENST00000510676	KRTAP19-3	Q7Z4W3	81 aa		4.14	□□□□□ -1.75
PTCD2-208	ENST00000510676	CLLU1	Q5K131	121 aa		4.13	□□□□□ -1.75
PTCD2-208	ENST00000510676		A8MUN3	132 aa		4.11	□□□□□ -1.75
PTCD2-208	ENST00000510676		H0YGX0	51 aa		4.11	□□□□□ -1.75
PTCD2-208	ENST00000510676		A0A1B0GX51	115 aa		4.09	□□□□□ -1.75
PTCD2-208	ENST00000510676		Q5W150	140 aa		4.09	□□□□□ -1.75
PTCD2-208	ENST00000510676	CYSTM1	Q9H1C7	97 aa		4.09	□□□□□ -1.75
PTCD2-208	ENST00000510676	TMEM254	Q8TBM7	123 aa		4.08	□□□□□ -1.76
PTCD2-208	ENST00000510676	MRPL34	Q9BQ48	92 aa	Known RBP	4.08	□□□□□ -1.76
PTCD2-208	ENST00000510676	SMIM26	A0A096LP01	95 aa		4.07	□□□□□ -1.76
PTCD2-208	ENST00000510676	COA6	Q5JTJ3	125 aa	Known RBP	4.07	□□□□□ -1.76
PTCD2-208	ENST00000510676		A0A1B0GV72	72 aa		4.06	□□□□□ -1.76
PTCD2-208	ENST00000510676	PDE6G	P18545	87 aa		4.06	□□□□□ -1.76
PTCD2-208	ENST00000510676	LCE1E	Q5T753	118 aa		4.05	□□□□□ -1.76
PTCD2-208	ENST00000510676		H0YAA0	97 aa		4.04	□□□□□ -1.76
PTCD2-208	ENST00000510676	NDUFS5	O43920	106 aa		4.04	□□□□□ -1.76
PTCD2-208	ENST00000510676	MT3	P25713	68 aa		4.04	□□□□□ -1.76
PTCD2-208	ENST00000510676	MMP24-AS1	A0A0U1RRL7	71 aa		4.03	□□□□□ -1.76
PTCD2-208	ENST00000510676	KRTAP19-7	Q3SYF9	63 aa		4.03	□□□□□ -1.76
PTCD2-208	ENST00000510676	C1orf64	Q8NEQ6	169 aa		4.03	□□□□□ -1.76
PTCD2-208	ENST00000510676	PSPHP1	O15172	72 aa		4.02	□□□□□ -1.77
PTCD2-208	ENST00000510676	MT1E	P04732	61 aa		4.02	□□□□□ -1.77
PTCD2-208	ENST00000510676		Q6ZQT0	140 aa		4.02	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms