RNA–Protein interactions for RNA: ENST00000509511.5

FGFR4-211, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 1 (best)

Gene FGFR4, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-211ENST00000509511 IGHV6-1A0A0B4J1U7 121 aa10.46□□□□□ -0.73
FGFR4-211ENST00000509511 K7EP34 96 aa10.46□□□□□ -0.73
FGFR4-211ENST00000509511 LINC00313P59037 77 aa10.46□□□□□ -0.73
FGFR4-211ENST00000509511 GTF2H5Q6ZYL4 71 aa10.46□□□□□ -0.73
FGFR4-211ENST00000509511 C20orf166-AS1Q96NR2 134 aa10.46□□□□□ -0.73
FGFR4-211ENST00000509511 A0A1B0GVX0 72 aa10.43□□□□□ -0.74
FGFR4-211ENST00000509511 A8MUU9 505 aa10.42□□□□□ -0.74
FGFR4-211ENST00000509511 C8orf87E5RJ46 101 aa10.41□□□□□ -0.74
FGFR4-211ENST00000509511 NDUFB1O75438 58 aa10.39□□□□□ -0.75
FGFR4-211ENST00000509511 SMCPP49901 116 aaPredicted RBP10.38□□□□□ -0.75
FGFR4-211ENST00000509511 KRTAP16-1A8MUX0 517 aa10.37□□□□□ -0.75
FGFR4-211ENST00000509511 NREPQ16612 68 aa10.37□□□□□ -0.75
FGFR4-211ENST00000509511 NOTCH2NLQ7Z3S9 236 aa10.37□□□□□ -0.75
FGFR4-211ENST00000509511 PRO0461Q9UI25 63 aa10.37□□□□□ -0.75
FGFR4-211ENST00000509511 A8MWP4 228 aa10.35□□□□□ -0.75
FGFR4-211ENST00000509511 LCE2AQ5TA79 106 aaPredicted RBP10.34□□□□□ -0.75
FGFR4-211ENST00000509511 IGKV3D-7A0A0C4DH55 119 aa10.29□□□□□ -0.76
FGFR4-211ENST00000509511 F8W1H4 67 aa10.29□□□□□ -0.76
FGFR4-211ENST00000509511 KRTAP19-2Q3LHN2 52 aa10.26□□□□□ -0.77
FGFR4-211ENST00000509511 C8orf17Q9NRJ1 99 aa10.26□□□□□ -0.77
FGFR4-211ENST00000509511 PRR15Q8IV56 129 aa10.25□□□□□ -0.77
FGFR4-211ENST00000509511 BPY2O14599 106 aa10.23□□□□□ -0.77
FGFR4-211ENST00000509511 LCE2CQ5TA81 110 aa10.23□□□□□ -0.77
FGFR4-211ENST00000509511 COX6B2Q6YFQ2 88 aa10.23□□□□□ -0.77
FGFR4-211ENST00000509511 Q6ZVQ6 151 aa10.23□□□□□ -0.77
FGFR4-211ENST00000509511 K7EQZ3 153 aa10.19□□□□□ -0.78
FGFR4-211ENST00000509511 ETDBQ3ZM63 59 aa10.18□□□□□ -0.78
FGFR4-211ENST00000509511 Q8N9P0 234 aaPredicted RBP10.18□□□□□ -0.78
FGFR4-211ENST00000509511 UBL5Q9BZL1 73 aa10.18□□□□□ -0.78
FGFR4-211ENST00000509511 MMP24-AS1A0A0U1RRL7 71 aa10.16□□□□□ -0.78
FGFR4-211ENST00000509511 ZCCHC13Q8WW36 166 aaKnown RBP10.15□□□□□ -0.78
FGFR4-211ENST00000509511 LINC00846Q9NV44 126 aa10.15□□□□□ -0.78
FGFR4-211ENST00000509511 TMEM254Q8TBM7 123 aa10.14□□□□□ -0.79
FGFR4-211ENST00000509511 MT1HP80294 61 aa10.13□□□□□ -0.79
FGFR4-211ENST00000509511 hDV103S1A0JD37 113 aa10.11□□□□□ -0.79
FGFR4-211ENST00000509511 MRPL34Q9BQ48 92 aaKnown RBP10.11□□□□□ -0.79
FGFR4-211ENST00000509511 Q8N9L7 120 aa10.09□□□□□ -0.79
FGFR4-211ENST00000509511 NDUFS5O43920 106 aa10.05□□□□□ -0.8
FGFR4-211ENST00000509511 CASC2Q6XLA1 102 aa10.03□□□□□ -0.8
FGFR4-211ENST00000509511 WFDC13Q8IUB5 93 aa10.03□□□□□ -0.8
FGFR4-211ENST00000509511 M0R2T5 61 aa10.02□□□□□ -0.81
FGFR4-211ENST00000509511 RBM12B-AS1Q9P1G2 102 aa10.01□□□□□ -0.81
FGFR4-211ENST00000509511 FAM236DA0A1B0GTK5 79 aa10□□□□□ -0.81
FGFR4-211ENST00000509511 FAM236CP0DP71 79 aa10□□□□□ -0.81
FGFR4-211ENST00000509511 HRES1P13985 223 aa10□□□□□ -0.81
FGFR4-211ENST00000509511 FLGP20930 4061 aaPredicted RBP9.99□□□□□ -0.81
FGFR4-211ENST00000509511 SPINK7P58062 85 aa9.99□□□□□ -0.81
FGFR4-211ENST00000509511 CXCL6P80162 114 aa9.98□□□□□ -0.81
FGFR4-211ENST00000509511 KRTAP9-2Q9BYQ4 174 aa9.98□□□□□ -0.81
FGFR4-211ENST00000509511 HCG22E2RYF7 251 aa9.97□□□□□ -0.81
FGFR4-211ENST00000509511 J3QR89 54 aa9.97□□□□□ -0.81
FGFR4-211ENST00000509511 ACYP1P07311 99 aa9.96□□□□□ -0.82
FGFR4-211ENST00000509511 MPLKIPQ8TAP9 179 aa9.96□□□□□ -0.82
FGFR4-211ENST00000509511 FAM240AA0A1B0GVK7 77 aa9.95□□□□□ -0.82
FGFR4-211ENST00000509511 K7ERU9 68 aa9.9□□□□□ -0.82
FGFR4-211ENST00000509511 KRTAP10-6P60371 365 aaPredicted RBP9.88□□□□□ -0.83
FGFR4-211ENST00000509511 ATP5EP2Q5VTU8 51 aa9.87□□□□□ -0.83
FGFR4-211ENST00000509511 LORP23490 312 aaPredicted RBP9.86□□□□□ -0.83
FGFR4-211ENST00000509511 Q5W150 140 aa9.83□□□□□ -0.84
FGFR4-211ENST00000509511 C7orf65Q6ZTY9 151 aa9.83□□□□□ -0.84
FGFR4-211ENST00000509511 IGKV2D-30A0A075B6S6 120 aa9.82□□□□□ -0.84
FGFR4-211ENST00000509511 IGKV2-30P06310 120 aa9.82□□□□□ -0.84
FGFR4-211ENST00000509511 TP53AIP1Q9HCN2 124 aa9.77□□□□□ -0.85
FGFR4-211ENST00000509511 HIST1H4AP62805 103 aaKnown RBP9.74□□□□□ -0.85
FGFR4-211ENST00000509511 LINC00643Q86TS7 51 aa9.73□□□□□ -0.85
FGFR4-211ENST00000509511 LCE2DQ5TA82 110 aaPredicted RBP9.71□□□□□ -0.86
FGFR4-211ENST00000509511 KRTAP9-6A0A140TA67 174 aa9.65□□□□□ -0.86
FGFR4-211ENST00000509511 H1FX-AS1Q4G0G2 97 aa9.61□□□□□ -0.87
FGFR4-211ENST00000509511 A0A087WVE0 104 aa9.59□□□□□ -0.87
FGFR4-211ENST00000509511 TRAV22A0A0B4J277 110 aa9.59□□□□□ -0.87
FGFR4-211ENST00000509511 C4orf26Q17RF5 130 aa9.59□□□□□ -0.87
FGFR4-211ENST00000509511 KRTAP9-8Q9BYQ0 159 aa9.58□□□□□ -0.88
FGFR4-211ENST00000509511 UQCRQO14949 82 aa9.54□□□□□ -0.88
FGFR4-211ENST00000509511 LOC101927531A0A1B0GV80 90 aa9.52□□□□□ -0.89
FGFR4-211ENST00000509511 MT2AP02795 61 aa9.52□□□□□ -0.89
FGFR4-211ENST00000509511 MT-ATP8P03928 68 aa9.52□□□□□ -0.89
FGFR4-211ENST00000509511 FSIP2Q5CZC0 6907 aa9.5□□□□□ -0.89
FGFR4-211ENST00000509511 ATOX1O00244 68 aa9.5□□□□□ -0.89
FGFR4-211ENST00000509511 CYP4F30PQ9H0H9 118 aa9.49□□□□□ -0.89
FGFR4-211ENST00000509511 H0Y9P7 68 aa9.48□□□□□ -0.89
FGFR4-211ENST00000509511 IMUPQ9GZP8 106 aa9.48□□□□□ -0.89
FGFR4-211ENST00000509511 C1orf64Q8NEQ6 169 aa9.46□□□□□ -0.9
FGFR4-211ENST00000509511 MT1FP04733 61 aa9.44□□□□□ -0.9
FGFR4-211ENST00000509511 KRTAP10-10P60014 251 aa9.42□□□□□ -0.9
FGFR4-211ENST00000509511 CRCT1Q9UGL9 99 aa9.42□□□□□ -0.9
FGFR4-211ENST00000509511 OCR1Q9BZK8 76 aa9.4□□□□□ -0.9
FGFR4-211ENST00000509511 KRTAP3-1Q9BYR8 98 aa9.39□□□□□ -0.91
FGFR4-211ENST00000509511 S4R3F8 94 aa9.38□□□□□ -0.91
FGFR4-211ENST00000509511 MP68P56378 58 aa9.37□□□□□ -0.91
FGFR4-211ENST00000509511 SCGB1A1P11684 91 aa9.34□□□□□ -0.91
FGFR4-211ENST00000509511 LINC00208Q96KT6 92 aa9.33□□□□□ -0.92
FGFR4-211ENST00000509511 C5orf47Q569G3 176 aa9.31□□□□□ -0.92
FGFR4-211ENST00000509511 LCA10Q71F78 164 aa9.29□□□□□ -0.92
FGFR4-211ENST00000509511 FAM236AA0A1B0GUQ0 79 aa9.28□□□□□ -0.92
FGFR4-211ENST00000509511 FAM236BA0A1B0GV22 79 aa9.28□□□□□ -0.92
FGFR4-211ENST00000509511 KRTAP9-3Q9BYQ3 159 aa9.28□□□□□ -0.92
FGFR4-211ENST00000509511 H3BPC8 53 aa9.25□□□□□ -0.93
FGFR4-211ENST00000509511 CSAG1Q6PB30 78 aa9.25□□□□□ -0.93
FGFR4-211ENST00000509511 KLKP1Q107X0 134 aa9.21□□□□□ -0.94
FGFR4-211ENST00000509511 USH2AO75445 5202 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms