RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 RBM12B-AS1Q9P1G2 102 aa5.49□□□□□ -1.53
PDGFRA-208ENST00000509490 DNAH8Q96JB1 4490 aa5.49□□□□□ -1.53
PDGFRA-208ENST00000509490 LINC01558Q9Y6Z2 57 aa5.48□□□□□ -1.53
PDGFRA-208ENST00000509490 IGLV9-49A0A0B4J1Y8 123 aa5.48□□□□□ -1.53
PDGFRA-208ENST00000509490 DNAH6Q9C0G6 4158 aa5.47□□□□□ -1.53
PDGFRA-208ENST00000509490 RTL8CO15255 209 aa5.47□□□□□ -1.53
PDGFRA-208ENST00000509490 COL7A1Q02388 2944 aa5.46□□□□□ -1.53
PDGFRA-208ENST00000509490 STAB2Q8WWQ8 2551 aa5.46□□□□□ -1.54
PDGFRA-208ENST00000509490 HECTD4Q9Y4D8 3996 aa5.46□□□□□ -1.54
PDGFRA-208ENST00000509490 TENM2Q9NT68 2774 aa5.46□□□□□ -1.54
PDGFRA-208ENST00000509490 PLA2G1BP04054 148 aaKnown RBP5.46□□□□□ -1.54
PDGFRA-208ENST00000509490 CSMD3Q7Z407 3707 aa5.46□□□□□ -1.54
PDGFRA-208ENST00000509490 CDK2AP2O75956 126 aa5.45□□□□□ -1.54
PDGFRA-208ENST00000509490 DNAH2Q9P225 4427 aa5.45□□□□□ -1.54
PDGFRA-208ENST00000509490 SSBP3-AS1Q7Z2R9 100 aa5.44□□□□□ -1.54
PDGFRA-208ENST00000509490 IGHV6-1A0A0B4J1U7 121 aa5.43□□□□□ -1.54
PDGFRA-208ENST00000509490 IGLV7-43P04211 117 aa5.43□□□□□ -1.54
PDGFRA-208ENST00000509490 PRR15LQ9BU68 103 aa5.43□□□□□ -1.54
PDGFRA-208ENST00000509490 HRES1P13985 223 aa5.42□□□□□ -1.54
PDGFRA-208ENST00000509490 SRRM2Q9UQ35 2752 aaKnown RBP5.42□□□□□ -1.54
PDGFRA-208ENST00000509490 ATP11AUNQ6ZP68 121 aa5.41□□□□□ -1.54
PDGFRA-208ENST00000509490 STARD9Q9P2P6 4700 aa5.41□□□□□ -1.54
PDGFRA-208ENST00000509490 CHKB-CPT1BH3BT56 60 aa5.41□□□□□ -1.54
PDGFRA-208ENST00000509490 A0A087X002 238 aa5.4□□□□□ -1.54
PDGFRA-208ENST00000509490 NOTCH2NLQ7Z3S9 236 aa5.4□□□□□ -1.54
PDGFRA-208ENST00000509490 COL6A5A8TX70 2615 aa5.4□□□□□ -1.54
PDGFRA-208ENST00000509490 PCOTHQ58A44 107 aa5.4□□□□□ -1.54
PDGFRA-208ENST00000509490 CDC42SE1Q9NRR8 79 aa5.4□□□□□ -1.54
PDGFRA-208ENST00000509490 LCA10Q71F78 164 aa5.39□□□□□ -1.55
PDGFRA-208ENST00000509490 ALMS1Q8TCU4 4167 aa5.39□□□□□ -1.55
PDGFRA-208ENST00000509490 Q5W150 140 aa5.37□□□□□ -1.55
PDGFRA-208ENST00000509490 NDUFS5O43920 106 aa5.37□□□□□ -1.55
PDGFRA-208ENST00000509490 DMAC1Q96GE9 116 aa5.36□□□□□ -1.55
PDGFRA-208ENST00000509490 MGAM2Q2M2H8 2515 aa5.36□□□□□ -1.55
PDGFRA-208ENST00000509490 C1orf134Q5TEV5 83 aa5.35□□□□□ -1.55
PDGFRA-208ENST00000509490 ANAPC11Q9NYG5 84 aa5.35□□□□□ -1.55
PDGFRA-208ENST00000509490 A6NN06 94 aa5.34□□□□□ -1.55
PDGFRA-208ENST00000509490 A8MU10 97 aa5.34□□□□□ -1.55
PDGFRA-208ENST00000509490 ACYP2P14621 99 aa5.34□□□□□ -1.56
PDGFRA-208ENST00000509490 Q6ZSA8 131 aa5.34□□□□□ -1.56
PDGFRA-208ENST00000509490 A6NED7 52 aa5.33□□□□□ -1.56
PDGFRA-208ENST00000509490 KRTAP16-1A8MUX0 517 aa5.32□□□□□ -1.56
PDGFRA-208ENST00000509490 SPAG11AQ6PDA7 123 aa5.32□□□□□ -1.56
PDGFRA-208ENST00000509490 KTN1-AS1Q86SY8 53 aa5.32□□□□□ -1.56
PDGFRA-208ENST00000509490 DNAH11Q96DT5 4516 aa5.32□□□□□ -1.56
PDGFRA-208ENST00000509490 IGKV2-30P06310 120 aa5.31□□□□□ -1.56
PDGFRA-208ENST00000509490 LINC00313P59037 77 aa5.31□□□□□ -1.56
PDGFRA-208ENST00000509490 DNAH5Q8TE73 4624 aa5.3□□□□□ -1.56
PDGFRA-208ENST00000509490 FBN3Q75N90 2809 aa5.3□□□□□ -1.56
PDGFRA-208ENST00000509490 CIRBP-AS1Q8TBR5 109 aa5.3□□□□□ -1.56
PDGFRA-208ENST00000509490 FRAS1Q86XX4 4008 aa5.3□□□□□ -1.56
PDGFRA-208ENST00000509490 KRTAP13-2Q52LG2 175 aa5.29□□□□□ -1.56
PDGFRA-208ENST00000509490 SPINK6Q6UWN8 80 aa5.27□□□□□ -1.57
PDGFRA-208ENST00000509490 KMT2AQ03164 3969 aa5.27□□□□□ -1.57
PDGFRA-208ENST00000509490 SPINK7P58062 85 aa5.27□□□□□ -1.57
PDGFRA-208ENST00000509490 KRTAP1-4P0C5Y4 121 aa5.25□□□□□ -1.57
PDGFRA-208ENST00000509490 RPS29P62273 56 aaKnown RBP5.24□□□□□ -1.57
PDGFRA-208ENST00000509490 KRTAP10-2P60368 255 aa5.23□□□□□ -1.57
PDGFRA-208ENST00000509490 C7orf65Q6ZTY9 151 aa5.22□□□□□ -1.57
PDGFRA-208ENST00000509490 SACSQ9NZJ4 4579 aa5.22□□□□□ -1.57
PDGFRA-208ENST00000509490 PKD1P98161 4303 aa5.22□□□□□ -1.57
PDGFRA-208ENST00000509490 SPTSSBQ8NFR3 76 aa5.22□□□□□ -1.57
PDGFRA-208ENST00000509490 SPATA8Q6RVD6 105 aa5.21□□□□□ -1.58
PDGFRA-208ENST00000509490 IGKV2D-30A0A075B6S6 120 aa5.2□□□□□ -1.58
PDGFRA-208ENST00000509490 SPINK1P00995 79 aa5.19□□□□□ -1.58
PDGFRA-208ENST00000509490 KRTAP10-1P60331 282 aa5.19□□□□□ -1.58
PDGFRA-208ENST00000509490 MEGF8Q7Z7M0 2845 aa5.19□□□□□ -1.58
PDGFRA-208ENST00000509490 FAT2Q9NYQ8 4349 aa5.19□□□□□ -1.58
PDGFRA-208ENST00000509490 LRP1BQ9NZR2 4599 aa5.18□□□□□ -1.58
PDGFRA-208ENST00000509490 LY6G6CO95867 125 aa5.17□□□□□ -1.58
PDGFRA-208ENST00000509490 A0A1B0GU69 56 aa5.16□□□□□ -1.58
PDGFRA-208ENST00000509490 UQCR11O14957 56 aa5.12□□□□□ -1.59
PDGFRA-208ENST00000509490 SEC61BP60468 96 aaKnown RBP5.12□□□□□ -1.59
PDGFRA-208ENST00000509490 TYMSOSQ8TAI1 123 aa5.11□□□□□ -1.59
PDGFRA-208ENST00000509490 PKHD1L1Q86WI1 4243 aa5.09□□□□□ -1.59
PDGFRA-208ENST00000509490 MIR22HGQ0VDD5 57 aa5.09□□□□□ -1.6
PDGFRA-208ENST00000509490 VPS13BQ7Z7G8 4022 aa5.08□□□□□ -1.6
PDGFRA-208ENST00000509490 TGP01266 2768 aa5.08□□□□□ -1.6
PDGFRA-208ENST00000509490 A8MUU9 505 aa5.08□□□□□ -1.6
PDGFRA-208ENST00000509490 C20orf166-AS1Q96NR2 134 aa5.08□□□□□ -1.6
PDGFRA-208ENST00000509490 RETNLBQ9BQ08 111 aa5.08□□□□□ -1.6
PDGFRA-208ENST00000509490 LINC00304Q8N9R0 145 aa5.07□□□□□ -1.6
PDGFRA-208ENST00000509490 HYDINQ4G0P3 5121 aa5.03□□□□□ -1.6
PDGFRA-208ENST00000509490 DNHD1Q96M86 4753 aa5.03□□□□□ -1.6
PDGFRA-208ENST00000509490 KRTAP21-3Q3LHN1 58 aa5.02□□□□□ -1.61
PDGFRA-208ENST00000509490 ADM2Q7Z4H4 148 aa5.02□□□□□ -1.61
PDGFRA-208ENST00000509490 LINC01554Q52M75 96 aa5.01□□□□□ -1.61
PDGFRA-208ENST00000509490 APOBP04114 4563 aaKnown RBP5.01□□□□□ -1.61
PDGFRA-208ENST00000509490 KRTAP10-4P60372 401 aaPredicted RBP5.01□□□□□ -1.61
PDGFRA-208ENST00000509490 PRAC1Q96KF2 57 aa5□□□□□ -1.61
PDGFRA-208ENST00000509490 DYNC1H1Q14204 4646 aaKnown RBP4.98□□□□□ -1.61
PDGFRA-208ENST00000509490 PKHD1P08F94 4074 aa4.97□□□□□ -1.61
PDGFRA-208ENST00000509490 KRTAP3-1Q9BYR8 98 aa4.97□□□□□ -1.61
PDGFRA-208ENST00000509490 A0A1B0GVY2 172 aa4.96□□□□□ -1.61
PDGFRA-208ENST00000509490 Q8N1X5 172 aa4.95□□□□□ -1.62
PDGFRA-208ENST00000509490 H0YAA0 97 aa4.92□□□□□ -1.62
PDGFRA-208ENST00000509490 COX6B2Q6YFQ2 88 aa4.9□□□□□ -1.62
PDGFRA-208ENST00000509490 H1FX-AS1Q4G0G2 97 aa4.9□□□□□ -1.63
PDGFRA-208ENST00000509490 A0A1B0GU33 70 aa4.88□□□□□ -1.63
PDGFRA-208ENST00000509490 TNXBP22105 4242 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms