RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 OCR1Q9BZK8 76 aa7.4□□□□□ -1.22
LYSMD3-204ENST00000509384 H7BZZ5 65 aa7.39□□□□□ -1.23
LYSMD3-204ENST00000509384 TYMSOSQ8TAI1 123 aa7.39□□□□□ -1.23
LYSMD3-204ENST00000509384 CD164Q04900 197 aa7.38□□□□□ -1.23
LYSMD3-204ENST00000509384 XP32Q5T750 250 aa7.37□□□□□ -1.23
LYSMD3-204ENST00000509384 PRR26Q8N8Z3 221 aa7.37□□□□□ -1.23
LYSMD3-204ENST00000509384 Q8N9L7 120 aa7.37□□□□□ -1.23
LYSMD3-204ENST00000509384 TMEM254Q8TBM7 123 aa7.37□□□□□ -1.23
LYSMD3-204ENST00000509384 Q8N1X5 172 aa7.37□□□□□ -1.23
LYSMD3-204ENST00000509384 DSCR10P59022 87 aa7.36□□□□□ -1.23
LYSMD3-204ENST00000509384 SERP1Q9Y6X1 66 aa7.35□□□□□ -1.23
LYSMD3-204ENST00000509384 A0A0U1RQV1 116 aa7.33□□□□□ -1.24
LYSMD3-204ENST00000509384 PKHD1L1Q86WI1 4243 aa7.33□□□□□ -1.24
LYSMD3-204ENST00000509384 HCG22E2RYF7 251 aa7.32□□□□□ -1.24
LYSMD3-204ENST00000509384 C4orf48Q5BLP8 95 aa7.32□□□□□ -1.24
LYSMD3-204ENST00000509384 HERC1Q15751 4861 aa7.32□□□□□ -1.24
LYSMD3-204ENST00000509384 DEFB116Q30KQ4 102 aa7.32□□□□□ -1.24
LYSMD3-204ENST00000509384 LINC00472Q9H8W2 130 aa7.32□□□□□ -1.24
LYSMD3-204ENST00000509384 SNURFQ9Y675 71 aa7.32□□□□□ -1.24
LYSMD3-204ENST00000509384 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.31□□□□□ -1.24
LYSMD3-204ENST00000509384 K7EQZ3 153 aa7.31□□□□□ -1.24
LYSMD3-204ENST00000509384 SVIPQ8NHG7 77 aa7.31□□□□□ -1.24
LYSMD3-204ENST00000509384 C5orf47Q569G3 176 aa7.3□□□□□ -1.24
LYSMD3-204ENST00000509384 LINC00304Q8N9R0 145 aa7.3□□□□□ -1.24
LYSMD3-204ENST00000509384 LIMD2Q9BT23 127 aa7.29□□□□□ -1.24
LYSMD3-204ENST00000509384 KRTAP9-2Q9BYQ4 174 aa7.29□□□□□ -1.24
LYSMD3-204ENST00000509384 SPINK1P00995 79 aa7.28□□□□□ -1.24
LYSMD3-204ENST00000509384 SPAG11AQ6PDA7 123 aa7.28□□□□□ -1.24
LYSMD3-204ENST00000509384 Q96NJ1 140 aa7.28□□□□□ -1.24
LYSMD3-204ENST00000509384 Q5XG85 94 aa7.27□□□□□ -1.25
LYSMD3-204ENST00000509384 ASB16-AS1Q495Z4 193 aa7.27□□□□□ -1.25
LYSMD3-204ENST00000509384 A8MWP4 228 aa7.26□□□□□ -1.25
LYSMD3-204ENST00000509384 KRTAP9-6A0A140TA67 174 aa7.25□□□□□ -1.25
LYSMD3-204ENST00000509384 PRR15Q8IV56 129 aa7.25□□□□□ -1.25
LYSMD3-204ENST00000509384 H3BPC8 53 aa7.24□□□□□ -1.25
LYSMD3-204ENST00000509384 RPS29P62273 56 aaKnown RBP7.24□□□□□ -1.25
LYSMD3-204ENST00000509384 NDUFB1O75438 58 aa7.23□□□□□ -1.25
LYSMD3-204ENST00000509384 SMIM26A0A096LP01 95 aa7.22□□□□□ -1.25
LYSMD3-204ENST00000509384 ZCCHC13Q8WW36 166 aaKnown RBP7.22□□□□□ -1.25
LYSMD3-204ENST00000509384 KRTAP29-1A8MX34 341 aaPredicted RBP7.22□□□□□ -1.25
LYSMD3-204ENST00000509384 OXTP01178 125 aa7.22□□□□□ -1.25
LYSMD3-204ENST00000509384 MP68P56378 58 aa7.22□□□□□ -1.25
LYSMD3-204ENST00000509384 KRTAP10-8P60410 259 aa7.21□□□□□ -1.26
LYSMD3-204ENST00000509384 C1orf195Q5TG92 126 aa7.21□□□□□ -1.26
LYSMD3-204ENST00000509384 LRP1Q07954 4544 aaKnown RBP7.2□□□□□ -1.26
LYSMD3-204ENST00000509384 CASC2Q6XLA1 102 aa7.2□□□□□ -1.26
LYSMD3-204ENST00000509384 KRTAP4-5Q9BYR2 181 aa7.2□□□□□ -1.26
LYSMD3-204ENST00000509384 FAT3Q8TDW7 4589 aa7.19□□□□□ -1.26
LYSMD3-204ENST00000509384 A0A1B0GVX0 72 aa7.17□□□□□ -1.26
LYSMD3-204ENST00000509384 IGHV6-1A0A0B4J1U7 121 aa7.17□□□□□ -1.26
LYSMD3-204ENST00000509384 WFDC13Q8IUB5 93 aa7.17□□□□□ -1.26
LYSMD3-204ENST00000509384 UBR4Q5T4S7 5183 aa7.16□□□□□ -1.26
LYSMD3-204ENST00000509384 hDV103S1A0JD37 113 aa7.15□□□□□ -1.27
LYSMD3-204ENST00000509384 TNXBP22105 4242 aa7.15□□□□□ -1.27
LYSMD3-204ENST00000509384 MYCBP2O75592 4640 aa7.14□□□□□ -1.27
LYSMD3-204ENST00000509384 FLG2Q5D862 2391 aaPredicted RBP7.14□□□□□ -1.27
LYSMD3-204ENST00000509384 TP53AIP1Q9HCN2 124 aa7.14□□□□□ -1.27
LYSMD3-204ENST00000509384 MMP24-AS1A0A0U1RRL7 71 aa7.13□□□□□ -1.27
LYSMD3-204ENST00000509384 CYP4F30PQ9H0H9 118 aa7.13□□□□□ -1.27
LYSMD3-204ENST00000509384 C8orf17Q9NRJ1 99 aa7.13□□□□□ -1.27
LYSMD3-204ENST00000509384 MT1HL1P0DM35 61 aa7.12□□□□□ -1.27
LYSMD3-204ENST00000509384 DMBT1Q9UGM3 2413 aaPredicted RBP7.12□□□□□ -1.27
LYSMD3-204ENST00000509384 SPANXA2-OT1Q8N9U9 137 aa7.11□□□□□ -1.27
LYSMD3-204ENST00000509384 TRAV22A0A0B4J277 110 aa7.11□□□□□ -1.27
LYSMD3-204ENST00000509384 C8orf87E5RJ46 101 aa7.1□□□□□ -1.27
LYSMD3-204ENST00000509384 H0Y9P7 68 aa7.1□□□□□ -1.27
LYSMD3-204ENST00000509384 NOTCH2NLQ7Z3S9 236 aa7.08□□□□□ -1.28
LYSMD3-204ENST00000509384 RETNLBQ9BQ08 111 aa7.08□□□□□ -1.28
LYSMD3-204ENST00000509384 LINC00208Q96KT6 92 aa7.07□□□□□ -1.28
LYSMD3-204ENST00000509384 LINC00313P59037 77 aa7.06□□□□□ -1.28
LYSMD3-204ENST00000509384 C4orf26Q17RF5 130 aa7.06□□□□□ -1.28
LYSMD3-204ENST00000509384 FP248Q71RG6 208 aaPredicted RBP7.06□□□□□ -1.28
LYSMD3-204ENST00000509384 MRPL34Q9BQ48 92 aaKnown RBP7.04□□□□□ -1.28
LYSMD3-204ENST00000509384 C1orf64Q8NEQ6 169 aa7.03□□□□□ -1.28
LYSMD3-204ENST00000509384 LCE3BQ5TA77 95 aa7.01□□□□□ -1.29
LYSMD3-204ENST00000509384 NDUFS5O43920 106 aa7.01□□□□□ -1.29
LYSMD3-204ENST00000509384 V9GYY9 64 aa7□□□□□ -1.29
LYSMD3-204ENST00000509384 KRTAP16-1A8MUX0 517 aa6.98□□□□□ -1.29
LYSMD3-204ENST00000509384 Q1T7F1 81 aa6.97□□□□□ -1.29
LYSMD3-204ENST00000509384 C9orf92A6NGG3 77 aa6.96□□□□□ -1.29
LYSMD3-204ENST00000509384 IGLV7-46A0A075B6I9 117 aa6.96□□□□□ -1.3
LYSMD3-204ENST00000509384 Q8N9P0 234 aaPredicted RBP6.95□□□□□ -1.3
LYSMD3-204ENST00000509384 KRTAP4-12Q9BQ66 201 aa6.95□□□□□ -1.3
LYSMD3-204ENST00000509384 LOC101927531A0A1B0GV80 90 aa6.94□□□□□ -1.3
LYSMD3-204ENST00000509384 PRR4Q16378 134 aa6.92□□□□□ -1.3
LYSMD3-204ENST00000509384 KRTAP9-9Q9BYP9 154 aa6.92□□□□□ -1.3
LYSMD3-204ENST00000509384 KRTAP9-4Q9BYQ2 154 aa6.92□□□□□ -1.3
LYSMD3-204ENST00000509384 KRTAP4-8A0A0G2JLE6 195 aa6.91□□□□□ -1.3
LYSMD3-204ENST00000509384 PRO0628Q9UI54 55 aa6.91□□□□□ -1.3
LYSMD3-204ENST00000509384 MPLKIPQ8TAP9 179 aa6.91□□□□□ -1.3
LYSMD3-204ENST00000509384 KRTAP13-3Q3SY46 172 aa6.87□□□□□ -1.31
LYSMD3-204ENST00000509384 C20orf166-AS1Q96NR2 134 aa6.87□□□□□ -1.31
LYSMD3-204ENST00000509384 A8MUU9 505 aa6.86□□□□□ -1.31
LYSMD3-204ENST00000509384 Q5W150 140 aa6.86□□□□□ -1.31
LYSMD3-204ENST00000509384 HMCN2Q8NDA2 5059 aa6.84□□□□□ -1.31
LYSMD3-204ENST00000509384 COA5Q86WW8 74 aa6.83□□□□□ -1.32
LYSMD3-204ENST00000509384 TPRXLQ17RH7 258 aa6.82□□□□□ -1.32
LYSMD3-204ENST00000509384 PCOTHQ58A44 107 aa6.82□□□□□ -1.32
LYSMD3-204ENST00000509384 Q75L30 129 aa6.82□□□□□ -1.32
LYSMD3-204ENST00000509384 BRK1Q8WUW1 75 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms