RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 A0A1B0GVY2 172 aa5.41□□□□□ -1.54
HTT-205ENST00000509043 A0A087X002 238 aa5.4□□□□□ -1.54
HTT-205ENST00000509043 IGHV6-1A0A0B4J1U7 121 aa5.4□□□□□ -1.54
HTT-205ENST00000509043 KRTAP1-4P0C5Y4 121 aa5.4□□□□□ -1.54
HTT-205ENST00000509043 KRTAP13-2Q52LG2 175 aa5.4□□□□□ -1.54
HTT-205ENST00000509043 TRAV22A0A0B4J277 110 aa5.39□□□□□ -1.55
HTT-205ENST00000509043 H0Y9P7 68 aa5.39□□□□□ -1.55
HTT-205ENST00000509043 RPS29P62273 56 aaKnown RBP5.39□□□□□ -1.55
HTT-205ENST00000509043 MRPL34Q9BQ48 92 aaKnown RBP5.39□□□□□ -1.55
HTT-205ENST00000509043 PLA2G1BP04054 148 aaKnown RBP5.38□□□□□ -1.55
HTT-205ENST00000509043 HYDINQ4G0P3 5121 aa5.37□□□□□ -1.55
HTT-205ENST00000509043 SPINK1P00995 79 aa5.37□□□□□ -1.55
HTT-205ENST00000509043 LCE2CQ5TA81 110 aa5.37□□□□□ -1.55
HTT-205ENST00000509043 SPAG11AQ6PDA7 123 aa5.37□□□□□ -1.55
HTT-205ENST00000509043 SPANXA2-OT1Q8N9U9 137 aa5.36□□□□□ -1.55
HTT-205ENST00000509043 TYMSOSQ8TAI1 123 aa5.36□□□□□ -1.55
HTT-205ENST00000509043 LINC00208Q96KT6 92 aa5.36□□□□□ -1.55
HTT-205ENST00000509043 FAM229AH3BQW9 127 aa5.35□□□□□ -1.55
HTT-205ENST00000509043 C1orf64Q8NEQ6 169 aa5.35□□□□□ -1.55
HTT-205ENST00000509043 CYP4F30PQ9H0H9 118 aa5.35□□□□□ -1.55
HTT-205ENST00000509043 C1orf195Q5TG92 126 aa5.34□□□□□ -1.55
HTT-205ENST00000509043 SACSQ9NZJ4 4579 aa5.34□□□□□ -1.56
HTT-205ENST00000509043 LRP1BQ9NZR2 4599 aa5.33□□□□□ -1.56
HTT-205ENST00000509043 SMIM26A0A096LP01 95 aa5.32□□□□□ -1.56
HTT-205ENST00000509043 NDUFS5O43920 106 aa5.32□□□□□ -1.56
HTT-205ENST00000509043 LINC00313P59037 77 aa5.32□□□□□ -1.56
HTT-205ENST00000509043 LOC101927531A0A1B0GV80 90 aa5.3□□□□□ -1.56
HTT-205ENST00000509043 OXTP01178 125 aa5.3□□□□□ -1.56
HTT-205ENST00000509043 LINC00304Q8N9R0 145 aa5.3□□□□□ -1.56
HTT-205ENST00000509043 LCE2AQ5TA79 106 aaPredicted RBP5.29□□□□□ -1.56
HTT-205ENST00000509043 Q8N9P0 234 aaPredicted RBP5.29□□□□□ -1.56
HTT-205ENST00000509043 KRTAP10-4P60372 401 aaPredicted RBP5.28□□□□□ -1.56
HTT-205ENST00000509043 NOTCH2NLQ7Z3S9 236 aa5.28□□□□□ -1.56
HTT-205ENST00000509043 DYNC1H1Q14204 4646 aaKnown RBP5.27□□□□□ -1.57
HTT-205ENST00000509043 IGLV7-46A0A075B6I9 117 aa5.27□□□□□ -1.57
HTT-205ENST00000509043 SMR3BP02814 79 aaPredicted RBP5.26□□□□□ -1.57
HTT-205ENST00000509043 PRR26Q8N8Z3 221 aa5.26□□□□□ -1.57
HTT-205ENST00000509043 VPS13BQ7Z7G8 4022 aa5.26□□□□□ -1.57
HTT-205ENST00000509043 RYR2Q92736 4967 aa5.24□□□□□ -1.57
HTT-205ENST00000509043 KRTAP13-3Q3SY46 172 aa5.24□□□□□ -1.57
HTT-205ENST00000509043 KRTAP16-1A8MUX0 517 aa5.23□□□□□ -1.57
HTT-205ENST00000509043 LORP23490 312 aaPredicted RBP5.22□□□□□ -1.57
HTT-205ENST00000509043 PKHD1P08F94 4074 aa5.21□□□□□ -1.58
HTT-205ENST00000509043 FP248Q71RG6 208 aaPredicted RBP5.2□□□□□ -1.58
HTT-205ENST00000509043 V9GYY9 64 aa5.2□□□□□ -1.58
HTT-205ENST00000509043 Q5W150 140 aa5.19□□□□□ -1.58
HTT-205ENST00000509043 APOBP04114 4563 aaKnown RBP5.18□□□□□ -1.58
HTT-205ENST00000509043 PCOTHQ58A44 107 aa5.18□□□□□ -1.58
HTT-205ENST00000509043 PRR4Q16378 134 aa5.17□□□□□ -1.58
HTT-205ENST00000509043 Q1T7F1 81 aa5.17□□□□□ -1.58
HTT-205ENST00000509043 IGKV2-30P06310 120 aa5.16□□□□□ -1.58
HTT-205ENST00000509043 C4orf26Q17RF5 130 aa5.14□□□□□ -1.59
HTT-205ENST00000509043 Q5VSD8 79 aa5.14□□□□□ -1.59
HTT-205ENST00000509043 COA5Q86WW8 74 aa5.14□□□□□ -1.59
HTT-205ENST00000509043 PKHD1L1Q86WI1 4243 aa5.12□□□□□ -1.59
HTT-205ENST00000509043 ACYP2P14621 99 aa5.12□□□□□ -1.59
HTT-205ENST00000509043 KRTAP10-8P60410 259 aa5.12□□□□□ -1.59
HTT-205ENST00000509043 C20orf166-AS1Q96NR2 134 aa5.12□□□□□ -1.59
HTT-205ENST00000509043 KMT2CQ8NEZ4 4911 aaKnown RBP5.12□□□□□ -1.59
HTT-205ENST00000509043 A8MUU9 505 aa5.11□□□□□ -1.59
HTT-205ENST00000509043 DMAC1Q96GE9 116 aa5.11□□□□□ -1.59
HTT-205ENST00000509043 HRES1P13985 223 aa5.1□□□□□ -1.59
HTT-205ENST00000509043 MPLKIPQ8TAP9 179 aa5.1□□□□□ -1.59
HTT-205ENST00000509043 C7orf65Q6ZTY9 151 aa5.09□□□□□ -1.59
HTT-205ENST00000509043 FAT1Q14517 4588 aa5.07□□□□□ -1.6
HTT-205ENST00000509043 IGKV2D-30A0A075B6S6 120 aa5.06□□□□□ -1.6
HTT-205ENST00000509043 A8MUN3 132 aa5.06□□□□□ -1.6
HTT-205ENST00000509043 Q75L30 129 aa5.06□□□□□ -1.6
HTT-205ENST00000509043 Q8N1X5 172 aa5.06□□□□□ -1.6
HTT-205ENST00000509043 RETNLBQ9BQ08 111 aa5.06□□□□□ -1.6
HTT-205ENST00000509043 SVIPQ8NHG7 77 aa5.04□□□□□ -1.6
HTT-205ENST00000509043 H3BS24 57 aa5.03□□□□□ -1.6
HTT-205ENST00000509043 LINC01558Q9Y6Z2 57 aa5.03□□□□□ -1.6
HTT-205ENST00000509043 C9orf92A6NGG3 77 aa5.02□□□□□ -1.61
HTT-205ENST00000509043 CHKB-CPT1BH3BT56 60 aa5.02□□□□□ -1.61
HTT-205ENST00000509043 RYR1P21817 5038 aa5.01□□□□□ -1.61
HTT-205ENST00000509043 PRO0628Q9UI54 55 aa5□□□□□ -1.61
HTT-205ENST00000509043 HSPG2P98160 4391 aa4.99□□□□□ -1.61
HTT-205ENST00000509043 FLG2Q5D862 2391 aaPredicted RBP4.99□□□□□ -1.61
HTT-205ENST00000509043 RYR3Q15413 4870 aa4.98□□□□□ -1.61
HTT-205ENST00000509043 PSPHP1O15172 72 aa4.98□□□□□ -1.61
HTT-205ENST00000509043 PRR15LQ9BU68 103 aa4.98□□□□□ -1.61
HTT-205ENST00000509043 Q5VV11 94 aa4.97□□□□□ -1.61
HTT-205ENST00000509043 ATP11AUNQ6ZP68 121 aa4.96□□□□□ -1.62
HTT-205ENST00000509043 SPTSSBQ8NFR3 76 aa4.96□□□□□ -1.62
HTT-205ENST00000509043 MT1HL1P0DM35 61 aa4.95□□□□□ -1.62
HTT-205ENST00000509043 SPINK7P58062 85 aa4.95□□□□□ -1.62
HTT-205ENST00000509043 BRK1Q8WUW1 75 aa4.95□□□□□ -1.62
HTT-205ENST00000509043 TNXBP22105 4242 aa4.94□□□□□ -1.62
HTT-205ENST00000509043 RPL37P61927 97 aaKnown RBP4.94□□□□□ -1.62
HTT-205ENST00000509043 FAT3Q8TDW7 4589 aa4.92□□□□□ -1.62
HTT-205ENST00000509043 XP32Q5T750 250 aa4.9□□□□□ -1.63
HTT-205ENST00000509043 KRTAP17-1Q9BYP8 105 aa4.9□□□□□ -1.63
HTT-205ENST00000509043 A0A1B0GU69 56 aa4.88□□□□□ -1.63
HTT-205ENST00000509043 A6NED7 52 aa4.88□□□□□ -1.63
HTT-205ENST00000509043 TPRXLQ17RH7 258 aa4.88□□□□□ -1.63
HTT-205ENST00000509043 COX6B2Q6YFQ2 88 aa4.88□□□□□ -1.63
HTT-205ENST00000509043 LRP1Q07954 4544 aaKnown RBP4.87□□□□□ -1.63
HTT-205ENST00000509043 KIAA1109Q2LD37 5005 aa4.86□□□□□ -1.63
HTT-205ENST00000509043 CDC42SE1Q9NRR8 79 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms