RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 IGHV6-1A0A0B4J1U7 121 aa10.35□□□□□ -0.75
SFXN1-209ENST00000508290 A0A1B0GVX0 72 aa10.35□□□□□ -0.75
SFXN1-209ENST00000508290 C9orf118A6NHY6 69 aa10.35□□□□□ -0.75
SFXN1-209ENST00000508290 KRTAP16-1A8MUX0 517 aa10.35□□□□□ -0.75
SFXN1-209ENST00000508290 A0A1W2PPM0 123 aa10.31□□□□□ -0.76
SFXN1-209ENST00000508290 H3BT86 120 aa10.31□□□□□ -0.76
SFXN1-209ENST00000508290 NDUFB1O75438 58 aa10.31□□□□□ -0.76
SFXN1-209ENST00000508290 TAX1BP3O14907 124 aa10.29□□□□□ -0.76
SFXN1-209ENST00000508290 C14orf132Q9NPU4 83 aa10.29□□□□□ -0.76
SFXN1-209ENST00000508290 NOTCH2NLQ7Z3S9 236 aa10.28□□□□□ -0.76
SFXN1-209ENST00000508290 KRTAP9-6A0A140TA67 174 aa10.27□□□□□ -0.77
SFXN1-209ENST00000508290 M0R2T5 61 aa10.25□□□□□ -0.77
SFXN1-209ENST00000508290 A8MWP4 228 aa10.24□□□□□ -0.77
SFXN1-209ENST00000508290 NREPQ16612 68 aa10.21□□□□□ -0.77
SFXN1-209ENST00000508290 LCE2DQ5TA82 110 aaPredicted RBP10.2□□□□□ -0.78
SFXN1-209ENST00000508290 KRTAP10-6P60371 365 aaPredicted RBP10.17□□□□□ -0.78
SFXN1-209ENST00000508290 SPCS1Q9Y6A9 102 aa10.17□□□□□ -0.78
SFXN1-209ENST00000508290 LORP23490 312 aaPredicted RBP10.16□□□□□ -0.78
SFXN1-209ENST00000508290 COL5A1-AS1Q5SY13 56 aa10.16□□□□□ -0.78
SFXN1-209ENST00000508290 Q8N9P0 234 aaPredicted RBP10.16□□□□□ -0.78
SFXN1-209ENST00000508290 C8orf17Q9NRJ1 99 aa10.15□□□□□ -0.78
SFXN1-209ENST00000508290 IGKV3D-7A0A0C4DH55 119 aa10.14□□□□□ -0.79
SFXN1-209ENST00000508290 ZCCHC13Q8WW36 166 aaKnown RBP10.14□□□□□ -0.79
SFXN1-209ENST00000508290 PRR15Q8IV56 129 aa10.13□□□□□ -0.79
SFXN1-209ENST00000508290 MTURNQ8N3F0 131 aa10.12□□□□□ -0.79
SFXN1-209ENST00000508290 RBM12B-AS1Q9P1G2 102 aa10.12□□□□□ -0.79
SFXN1-209ENST00000508290 FLGP20930 4061 aaPredicted RBP10.11□□□□□ -0.79
SFXN1-209ENST00000508290 Q6ZVQ6 151 aa10.08□□□□□ -0.8
SFXN1-209ENST00000508290 FAM236DA0A1B0GTK5 79 aa10.07□□□□□ -0.8
SFXN1-209ENST00000508290 FAM236CP0DP71 79 aa10.07□□□□□ -0.8
SFXN1-209ENST00000508290 MPLKIPQ8TAP9 179 aa10.06□□□□□ -0.8
SFXN1-209ENST00000508290 HRES1P13985 223 aa10.05□□□□□ -0.8
SFXN1-209ENST00000508290 TMEM254Q8TBM7 123 aa10.04□□□□□ -0.8
SFXN1-209ENST00000508290 BPY2O14599 106 aa10.03□□□□□ -0.8
SFXN1-209ENST00000508290 K7EP34 96 aa10.02□□□□□ -0.81
SFXN1-209ENST00000508290 MMP24-AS1A0A0U1RRL7 71 aa10.01□□□□□ -0.81
SFXN1-209ENST00000508290 SPINK7P58062 85 aa10.01□□□□□ -0.81
SFXN1-209ENST00000508290 MRPL34Q9BQ48 92 aaKnown RBP10.01□□□□□ -0.81
SFXN1-209ENST00000508290 SMCPP49901 116 aaPredicted RBP10□□□□□ -0.81
SFXN1-209ENST00000508290 K7EQZ3 153 aa9.99□□□□□ -0.81
SFXN1-209ENST00000508290 hDV103S1A0JD37 113 aa9.98□□□□□ -0.81
SFXN1-209ENST00000508290 GTF2H5Q6ZYL4 71 aa9.97□□□□□ -0.81
SFXN1-209ENST00000508290 PRO0461Q9UI25 63 aa9.97□□□□□ -0.81
SFXN1-209ENST00000508290 UBL5Q9BZL1 73 aa9.94□□□□□ -0.82
SFXN1-209ENST00000508290 CRCT1Q9UGL9 99 aa9.91□□□□□ -0.82
SFXN1-209ENST00000508290 NDUFS5O43920 106 aa9.9□□□□□ -0.82
SFXN1-209ENST00000508290 F8W1H4 67 aa9.89□□□□□ -0.83
SFXN1-209ENST00000508290 LINC00846Q9NV44 126 aa9.87□□□□□ -0.83
SFXN1-209ENST00000508290 PCP4L1A6NKN8 68 aa9.86□□□□□ -0.83
SFXN1-209ENST00000508290 CASC2Q6XLA1 102 aa9.86□□□□□ -0.83
SFXN1-209ENST00000508290 WFDC13Q8IUB5 93 aa9.86□□□□□ -0.83
SFXN1-209ENST00000508290 FSIP2Q5CZC0 6907 aa9.85□□□□□ -0.83
SFXN1-209ENST00000508290 KRTAP9-8Q9BYQ0 159 aa9.83□□□□□ -0.84
SFXN1-209ENST00000508290 Q8N9L7 120 aa9.82□□□□□ -0.84
SFXN1-209ENST00000508290 CXCL6P80162 114 aa9.79□□□□□ -0.84
SFXN1-209ENST00000508290 C7orf65Q6ZTY9 151 aa9.77□□□□□ -0.85
SFXN1-209ENST00000508290 HCG22E2RYF7 251 aa9.76□□□□□ -0.85
SFXN1-209ENST00000508290 ETDBQ3ZM63 59 aa9.76□□□□□ -0.85
SFXN1-209ENST00000508290 IGKV2D-30A0A075B6S6 120 aa9.71□□□□□ -0.86
SFXN1-209ENST00000508290 IGKV2-30P06310 120 aa9.71□□□□□ -0.86
SFXN1-209ENST00000508290 Q5W150 140 aa9.71□□□□□ -0.86
SFXN1-209ENST00000508290 MT2AP02795 61 aa9.7□□□□□ -0.86
SFXN1-209ENST00000508290 ACYP1P07311 99 aa9.67□□□□□ -0.86
SFXN1-209ENST00000508290 H1FX-AS1Q4G0G2 97 aa9.67□□□□□ -0.86
SFXN1-209ENST00000508290 TP53AIP1Q9HCN2 124 aa9.66□□□□□ -0.86
SFXN1-209ENST00000508290 FAM240AA0A1B0GVK7 77 aa9.61□□□□□ -0.87
SFXN1-209ENST00000508290 KRTAP10-10P60014 251 aa9.61□□□□□ -0.87
SFXN1-209ENST00000508290 MT1FP04733 61 aa9.6□□□□□ -0.87
SFXN1-209ENST00000508290 ATP5EP2Q5VTU8 51 aa9.56□□□□□ -0.88
SFXN1-209ENST00000508290 C4orf26Q17RF5 130 aa9.52□□□□□ -0.89
SFXN1-209ENST00000508290 KRTAP9-3Q9BYQ3 159 aa9.51□□□□□ -0.89
SFXN1-209ENST00000508290 USH2AO75445 5202 aa9.42□□□□□ -0.9
SFXN1-209ENST00000508290 LCE2BO14633 110 aa9.41□□□□□ -0.9
SFXN1-209ENST00000508290 TRAV22A0A0B4J277 110 aa9.4□□□□□ -0.9
SFXN1-209ENST00000508290 C1orf64Q8NEQ6 169 aa9.4□□□□□ -0.9
SFXN1-209ENST00000508290 HIST1H4AP62805 103 aaKnown RBP9.39□□□□□ -0.91
SFXN1-209ENST00000508290 LINC00643Q86TS7 51 aa9.39□□□□□ -0.91
SFXN1-209ENST00000508290 LOC101927531A0A1B0GV80 90 aa9.38□□□□□ -0.91
SFXN1-209ENST00000508290 CYP4F30PQ9H0H9 118 aa9.35□□□□□ -0.91
SFXN1-209ENST00000508290 UQCRQO14949 82 aa9.34□□□□□ -0.91
SFXN1-209ENST00000508290 KRTAP3-1Q9BYR8 98 aa9.34□□□□□ -0.91
SFXN1-209ENST00000508290 S4R3F8 94 aa9.34□□□□□ -0.91
SFXN1-209ENST00000508290 ATOX1O00244 68 aa9.33□□□□□ -0.92
SFXN1-209ENST00000508290 A0A1B0GV90 55 aa9.32□□□□□ -0.92
SFXN1-209ENST00000508290 SSPOA2VEC9 5147 aa9.31□□□□□ -0.92
SFXN1-209ENST00000508290 CSAG1Q6PB30 78 aa9.3□□□□□ -0.92
SFXN1-209ENST00000508290 J3QR89 54 aa9.28□□□□□ -0.92
SFXN1-209ENST00000508290 C5orf47Q569G3 176 aa9.28□□□□□ -0.92
SFXN1-209ENST00000508290 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.24□□□□□ -0.93
SFXN1-209ENST00000508290 H0Y9P7 68 aa9.24□□□□□ -0.93
SFXN1-209ENST00000508290 LCA10Q71F78 164 aa9.24□□□□□ -0.93
SFXN1-209ENST00000508290 KRTAP19-1Q8IUB9 90 aa9.23□□□□□ -0.93
SFXN1-209ENST00000508290 A0A087WVE0 104 aa9.22□□□□□ -0.93
SFXN1-209ENST00000508290 KRTAP9-7A8MTY7 169 aa9.21□□□□□ -0.94
SFXN1-209ENST00000508290 FAM236AA0A1B0GUQ0 79 aa9.18□□□□□ -0.94
SFXN1-209ENST00000508290 FAM236BA0A1B0GV22 79 aa9.18□□□□□ -0.94
SFXN1-209ENST00000508290 KRTAP19-6Q3LI70 58 aa9.15□□□□□ -0.94
SFXN1-209ENST00000508290 MP68P56378 58 aa9.14□□□□□ -0.95
SFXN1-209ENST00000508290 A8MUN3 132 aa9.13□□□□□ -0.95
SFXN1-209ENST00000508290 FCGBPQ9Y6R7 5405 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 1019 ms