RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 UBR4Q5T4S7 5183 aa-0.39□□□□□ -2.47
SMN2-208ENST00000508258 TACC2O95359 2948 aa-0.39□□□□□ -2.47
SMN2-208ENST00000508258 ANKRD11Q6UB99 2663 aaPredicted RBP-0.4□□□□□ -2.47
SMN2-208ENST00000508258 USH2AO75445 5202 aa-0.4□□□□□ -2.47
SMN2-208ENST00000508258 MUC17Q685J3 4493 aa-0.4□□□□□ -2.47
SMN2-208ENST00000508258 RPS27P42677 84 aaKnown RBP-0.4□□□□□ -2.47
SMN2-208ENST00000508258 WT1-ASQ06250 92 aa-0.4□□□□□ -2.47
SMN2-208ENST00000508258 RPS27LQ71UM5 84 aaKnown RBP-0.4□□□□□ -2.47
SMN2-208ENST00000508258 SMCO4Q9NRQ5 59 aa-0.4□□□□□ -2.47
SMN2-208ENST00000508258 HILPDAQ9Y5L2 63 aa-0.4□□□□□ -2.47
SMN2-208ENST00000508258 FAT1Q14517 4588 aa-0.4□□□□□ -2.47
SMN2-208ENST00000508258 SPG11Q96JI7 2443 aa-0.4□□□□□ -2.47
SMN2-208ENST00000508258 GCN1Q92616 2671 aaKnown RBP-0.41□□□□□ -2.47
SMN2-208ENST00000508258 LAMA1P25391 3075 aa-0.41□□□□□ -2.47
SMN2-208ENST00000508258 TOGARAM1Q9Y4F4 1720 aa-0.41□□□□□ -2.47
SMN2-208ENST00000508258 ABCC6O95255 1503 aa-0.41□□□□□ -2.48
SMN2-208ENST00000508258 KALRNO60229 2985 aa-0.41□□□□□ -2.48
SMN2-208ENST00000508258 MROH1Q8NDA8 1641 aa-0.42□□□□□ -2.48
SMN2-208ENST00000508258 EPG5Q9HCE0 2579 aa-0.42□□□□□ -2.48
SMN2-208ENST00000508258 TRIOO75962 3097 aa-0.42□□□□□ -2.48
SMN2-208ENST00000508258 RANBP2P49792 3224 aaKnown RBP-0.42□□□□□ -2.48
SMN2-208ENST00000508258 PDCD5O14737 125 aa-0.42□□□□□ -2.48
SMN2-208ENST00000508258 MINOS1Q5TGZ0 78 aa-0.42□□□□□ -2.48
SMN2-208ENST00000508258 DNMBPQ6XZF7 1577 aa-0.43□□□□□ -2.48
SMN2-208ENST00000508258 FASNP49327 2511 aaKnown RBP-0.43□□□□□ -2.48
SMN2-208ENST00000508258 CLASP1Q7Z460 1538 aa-0.43□□□□□ -2.48
SMN2-208ENST00000508258 CEP290O15078 2479 aa-0.44□□□□□ -2.48
SMN2-208ENST00000508258 DNAH2Q9P225 4427 aa-0.44□□□□□ -2.48
SMN2-208ENST00000508258 KRTAP20-2Q3LI61 65 aa-0.44□□□□□ -2.48
SMN2-208ENST00000508258 MADDQ8WXG6 1647 aa-0.45□□□□□ -2.48
SMN2-208ENST00000508258 SPENQ96T58 3664 aaKnown RBP-0.45□□□□□ -2.48
SMN2-208ENST00000508258 MTORP42345 2549 aa-0.45□□□□□ -2.48
SMN2-208ENST00000508258 MT4P47944 62 aa-0.45□□□□□ -2.48
SMN2-208ENST00000508258 DEFB110Q30KQ9 67 aa-0.45□□□□□ -2.48
SMN2-208ENST00000508258 NCBP2-AS2Q69YL0 99 aa-0.45□□□□□ -2.48
SMN2-208ENST00000508258 GNG13Q9P2W3 67 aa-0.45□□□□□ -2.48
SMN2-208ENST00000508258 C6orf48Q9UBA6 75 aa-0.45□□□□□ -2.48
SMN2-208ENST00000508258 HERC2O95714 4834 aa-0.45□□□□□ -2.48
SMN2-208ENST00000508258 PKD1L2Q7Z442 2459 aa-0.45□□□□□ -2.48
SMN2-208ENST00000508258 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.45□□□□□ -2.48
SMN2-208ENST00000508258 EFCAB5A4FU69 1503 aa-0.46□□□□□ -2.48
SMN2-208ENST00000508258 IGLV5-48A0A075B6I7 105 aa-0.46□□□□□ -2.48
SMN2-208ENST00000508258 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.46□□□□□ -2.48
SMN2-208ENST00000508258 DNAH1Q9P2D7 4330 aa-0.47□□□□□ -2.48
SMN2-208ENST00000508258 RELNP78509 3460 aa-0.47□□□□□ -2.48
SMN2-208ENST00000508258 LINC01549A6NIU2 74 aa-0.47□□□□□ -2.48
SMN2-208ENST00000508258 NBEAQ8NFP9 2946 aa-0.47□□□□□ -2.48
SMN2-208ENST00000508258 LY75O60449 1722 aa-0.47□□□□□ -2.49
SMN2-208ENST00000508258 TIAM1Q13009 1591 aa-0.48□□□□□ -2.49
SMN2-208ENST00000508258 ABCA6Q8N139 1617 aa-0.48□□□□□ -2.49
SMN2-208ENST00000508258 WDR87Q6ZQQ6 2873 aa-0.48□□□□□ -2.49
SMN2-208ENST00000508258 CROCC2H7BZ55 1655 aa-0.48□□□□□ -2.49
SMN2-208ENST00000508258 FCER1GP30273 86 aa-0.48□□□□□ -2.49
SMN2-208ENST00000508258 KRTAP19-5Q3LI72 72 aa-0.48□□□□□ -2.49
SMN2-208ENST00000508258 CDC42BPAQ5VT25 1732 aa-0.48□□□□□ -2.49
SMN2-208ENST00000508258 MYO18BQ8IUG5 2567 aa-0.49□□□□□ -2.49
SMN2-208ENST00000508258 H3BUA1 57 aa-0.49□□□□□ -2.49
SMN2-208ENST00000508258 SFTA3P0C7M3 94 aa-0.49□□□□□ -2.49
SMN2-208ENST00000508258 UTP20O75691 2785 aaKnown RBP-0.49□□□□□ -2.49
SMN2-208ENST00000508258 EPPK1P58107 5090 aaKnown RBP-0.49□□□□□ -2.49
SMN2-208ENST00000508258 CCDC180Q9P1Z9 1646 aa-0.49□□□□□ -2.49
SMN2-208ENST00000508258 LRRK2Q5S007 2527 aa-0.49□□□□□ -2.49
SMN2-208ENST00000508258 ITPR3Q14573 2671 aa-0.5□□□□□ -2.49
SMN2-208ENST00000508258 NBEAL2Q6ZNJ1 2754 aa-0.5□□□□□ -2.49
SMN2-208ENST00000508258 ACACBO00763 2458 aa-0.5□□□□□ -2.49
SMN2-208ENST00000508258 MMP24-AS1A0A0U1RRL7 71 aa-0.5□□□□□ -2.49
SMN2-208ENST00000508258 K7EMI3 77 aa-0.5□□□□□ -2.49
SMN2-208ENST00000508258 DNAH8Q96JB1 4490 aa-0.5□□□□□ -2.49
SMN2-208ENST00000508258 A0A0C4DFX4 3053 aa-0.5□□□□□ -2.49
SMN2-208ENST00000508258 MGAM2Q2M2H8 2515 aa-0.5□□□□□ -2.49
SMN2-208ENST00000508258 PLECQ15149 4684 aaKnown RBP-0.51□□□□□ -2.49
SMN2-208ENST00000508258 FAM186AA6NE01 2351 aa-0.51□□□□□ -2.49
SMN2-208ENST00000508258 GLI2P10070 1586 aa-0.51□□□□□ -2.49
SMN2-208ENST00000508258 MT1HP80294 61 aa-0.51□□□□□ -2.49
SMN2-208ENST00000508258 SPTBN5Q9NRC6 3674 aaKnown RBP-0.52□□□□□ -2.49
SMN2-208ENST00000508258 TNP1P09430 55 aa-0.52□□□□□ -2.49
SMN2-208ENST00000508258 NOP10Q9NPE3 64 aaKnown RBP-0.52□□□□□ -2.49
SMN2-208ENST00000508258 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.52□□□□□ -2.49
SMN2-208ENST00000508258 LAMA3Q16787 3333 aa-0.53□□□□□ -2.49
SMN2-208ENST00000508258 A0A087WWC5 75 aa-0.53□□□□□ -2.49
SMN2-208ENST00000508258 M0R1W7 72 aa-0.53□□□□□ -2.49
SMN2-208ENST00000508258 MAST1Q9Y2H9 1570 aa-0.53□□□□□ -2.49
SMN2-208ENST00000508258 USP9YO00507 2555 aaPredicted RBP-0.54□□□□□ -2.5
SMN2-208ENST00000508258 ALS2Q96Q42 1657 aa-0.54□□□□□ -2.5
SMN2-208ENST00000508258 ACACAQ13085 2346 aa-0.54□□□□□ -2.5
SMN2-208ENST00000508258 SMR3BP02814 79 aaPredicted RBP-0.55□□□□□ -2.5
SMN2-208ENST00000508258 DEFB1P60022 68 aa-0.55□□□□□ -2.5
SMN2-208ENST00000508258 KRTAP8-1Q8IUC2 63 aa-0.55□□□□□ -2.5
SMN2-208ENST00000508258 RYR1P21817 5038 aa-0.55□□□□□ -2.5
SMN2-208ENST00000508258 EEA1Q15075 1411 aa-0.55□□□□□ -2.5
SMN2-208ENST00000508258 IGIPA6NJ69 53 aa-0.56□□□□□ -2.5
SMN2-208ENST00000508258 ABCA10Q8WWZ4 1543 aa-0.56□□□□□ -2.5
SMN2-208ENST00000508258 CMYA5Q8N3K9 4069 aa-0.56□□□□□ -2.5
SMN2-208ENST00000508258 BIRC6Q9NR09 4857 aa-0.56□□□□□ -2.5
SMN2-208ENST00000508258 SERF2P84101 59 aa-0.57□□□□□ -2.5
SMN2-208ENST00000508258 CLPSL2Q6UWE3 100 aa-0.57□□□□□ -2.5
SMN2-208ENST00000508258 NMES1Q9C002 83 aa-0.57□□□□□ -2.5
SMN2-208ENST00000508258 CELSR3Q9NYQ7 3312 aa-0.57□□□□□ -2.5
SMN2-208ENST00000508258 CCDC168Q8NDH2 2452 aa-0.57□□□□□ -2.5
SMN2-208ENST00000508258 FRYQ5TBA9 3013 aa-0.57□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms