RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 NAA38Q9BRA0 125 aaKnown RBP4.92□□□□□ -1.62
UBE2D3-223ENST00000508249 LOC110117498A0A087WWA1 95 aa4.91□□□□□ -1.62
UBE2D3-223ENST00000508249 A0A1W2PPM0 123 aa4.91□□□□□ -1.62
UBE2D3-223ENST00000508249 H3BT86 120 aa4.91□□□□□ -1.62
UBE2D3-223ENST00000508249 PCOTHQ58A44 107 aa4.91□□□□□ -1.62
UBE2D3-223ENST00000508249 SIGMAR1Q99720 223 aa4.91□□□□□ -1.62
UBE2D3-223ENST00000508249 SYNE2Q8WXH0 6885 aaKnown RBP4.91□□□□□ -1.62
UBE2D3-223ENST00000508249 J3KT08 172 aa4.9□□□□□ -1.63
UBE2D3-223ENST00000508249 TAX1BP3O14907 124 aa4.9□□□□□ -1.63
UBE2D3-223ENST00000508249 IGKV4-1P06312 121 aa4.9□□□□□ -1.63
UBE2D3-223ENST00000508249 OBSCN-AS1Q96MR7 158 aa4.9□□□□□ -1.63
UBE2D3-223ENST00000508249 VPS25Q9BRG1 176 aa4.9□□□□□ -1.63
UBE2D3-223ENST00000508249 LINC00472Q9H8W2 130 aa4.9□□□□□ -1.63
UBE2D3-223ENST00000508249 ATP11AUNQ6ZP68 121 aa4.89□□□□□ -1.63
UBE2D3-223ENST00000508249 COL5A1-AS1Q5SY13 56 aa4.88□□□□□ -1.63
UBE2D3-223ENST00000508249 Q6ZQT0 140 aa4.88□□□□□ -1.63
UBE2D3-223ENST00000508249 C20orf166-AS1Q96NR2 134 aa4.88□□□□□ -1.63
UBE2D3-223ENST00000508249 C8orf87E5RJ46 101 aa4.87□□□□□ -1.63
UBE2D3-223ENST00000508249 M0R2T5 61 aa4.87□□□□□ -1.63
UBE2D3-223ENST00000508249 LINC00313P59037 77 aa4.87□□□□□ -1.63
UBE2D3-223ENST00000508249 KRTAP19-1Q8IUB9 90 aa4.87□□□□□ -1.63
UBE2D3-223ENST00000508249 A8MUU9 505 aa4.86□□□□□ -1.63
UBE2D3-223ENST00000508249 NDUFB1O75438 58 aa4.85□□□□□ -1.63
UBE2D3-223ENST00000508249 KRTAP9-8Q9BYQ0 159 aa4.85□□□□□ -1.63
UBE2D3-223ENST00000508249 SPCS1Q9Y6A9 102 aa4.85□□□□□ -1.63
UBE2D3-223ENST00000508249 C14orf132Q9NPU4 83 aa4.84□□□□□ -1.63
UBE2D3-223ENST00000508249 A0A1B0GVX0 72 aa4.83□□□□□ -1.64
UBE2D3-223ENST00000508249 DSCR10P59022 87 aa4.83□□□□□ -1.64
UBE2D3-223ENST00000508249 COX6B2Q6YFQ2 88 aa4.83□□□□□ -1.64
UBE2D3-223ENST00000508249 IGHV6-1A0A0B4J1U7 121 aa4.82□□□□□ -1.64
UBE2D3-223ENST00000508249 NREPQ16612 68 aa4.81□□□□□ -1.64
UBE2D3-223ENST00000508249 DEFB116Q30KQ4 102 aa4.81□□□□□ -1.64
UBE2D3-223ENST00000508249 KRTAP16-1A8MUX0 517 aa4.8□□□□□ -1.64
UBE2D3-223ENST00000508249 A8MWP4 228 aa4.8□□□□□ -1.64
UBE2D3-223ENST00000508249 GTF2H5Q6ZYL4 71 aa4.8□□□□□ -1.64
UBE2D3-223ENST00000508249 K7EP34 96 aa4.79□□□□□ -1.64
UBE2D3-223ENST00000508249 MTURNQ8N3F0 131 aa4.78□□□□□ -1.64
UBE2D3-223ENST00000508249 PCP4L1A6NKN8 68 aa4.75□□□□□ -1.65
UBE2D3-223ENST00000508249 NOTCH2NLQ7Z3S9 236 aa4.75□□□□□ -1.65
UBE2D3-223ENST00000508249 PRR15Q8IV56 129 aa4.75□□□□□ -1.65
UBE2D3-223ENST00000508249 C8orf17Q9NRJ1 99 aa4.75□□□□□ -1.65
UBE2D3-223ENST00000508249 F8W1H4 67 aa4.74□□□□□ -1.65
UBE2D3-223ENST00000508249 Q8N9P0 234 aaPredicted RBP4.74□□□□□ -1.65
UBE2D3-223ENST00000508249 PRO0461Q9UI25 63 aa4.74□□□□□ -1.65
UBE2D3-223ENST00000508249 IGKV3D-7A0A0C4DH55 119 aa4.73□□□□□ -1.65
UBE2D3-223ENST00000508249 BPY2O14599 106 aa4.73□□□□□ -1.65
UBE2D3-223ENST00000508249 MT2AP02795 61 aa4.72□□□□□ -1.65
UBE2D3-223ENST00000508249 Q6ZVQ6 151 aa4.72□□□□□ -1.65
UBE2D3-223ENST00000508249 TMEM254Q8TBM7 123 aa4.72□□□□□ -1.65
UBE2D3-223ENST00000508249 UBL5Q9BZL1 73 aa4.72□□□□□ -1.65
UBE2D3-223ENST00000508249 ZCCHC13Q8WW36 166 aaKnown RBP4.71□□□□□ -1.66
UBE2D3-223ENST00000508249 KRTAP9-3Q9BYQ3 159 aa4.71□□□□□ -1.66
UBE2D3-223ENST00000508249 MT1FP04733 61 aa4.7□□□□□ -1.66
UBE2D3-223ENST00000508249 KRTAP6-3Q3LI67 103 aa4.7□□□□□ -1.66
UBE2D3-223ENST00000508249 MMP24-AS1A0A0U1RRL7 71 aa4.69□□□□□ -1.66
UBE2D3-223ENST00000508249 MRPL34Q9BQ48 92 aaKnown RBP4.69□□□□□ -1.66
UBE2D3-223ENST00000508249 hDV103S1A0JD37 113 aa4.68□□□□□ -1.66
UBE2D3-223ENST00000508249 K7EQZ3 153 aa4.68□□□□□ -1.66
UBE2D3-223ENST00000508249 RBM12B-AS1Q9P1G2 102 aa4.68□□□□□ -1.66
UBE2D3-223ENST00000508249 KRTAP19-6Q3LI70 58 aa4.67□□□□□ -1.66
UBE2D3-223ENST00000508249 MUC12Q9UKN1 5478 aa4.67□□□□□ -1.66
UBE2D3-223ENST00000508249 NEBP20929 6669 aa4.67□□□□□ -1.66
UBE2D3-223ENST00000508249 LINC00846Q9NV44 126 aa4.66□□□□□ -1.66
UBE2D3-223ENST00000508249 ETDBQ3ZM63 59 aa4.65□□□□□ -1.67
UBE2D3-223ENST00000508249 FAM236DA0A1B0GTK5 79 aa4.64□□□□□ -1.67
UBE2D3-223ENST00000508249 FAM236CP0DP71 79 aa4.64□□□□□ -1.67
UBE2D3-223ENST00000508249 HRES1P13985 223 aa4.64□□□□□ -1.67
UBE2D3-223ENST00000508249 MPLKIPQ8TAP9 179 aa4.64□□□□□ -1.67
UBE2D3-223ENST00000508249 NDUFS5O43920 106 aa4.63□□□□□ -1.67
UBE2D3-223ENST00000508249 ACYP1P07311 99 aa4.63□□□□□ -1.67
UBE2D3-223ENST00000508249 SPINK7P58062 85 aa4.63□□□□□ -1.67
UBE2D3-223ENST00000508249 CASC2Q6XLA1 102 aa4.63□□□□□ -1.67
UBE2D3-223ENST00000508249 CXCL6P80162 114 aa4.62□□□□□ -1.67
UBE2D3-223ENST00000508249 FAM240AA0A1B0GVK7 77 aa4.61□□□□□ -1.67
UBE2D3-223ENST00000508249 WFDC13Q8IUB5 93 aa4.61□□□□□ -1.67
UBE2D3-223ENST00000508249 HCG22E2RYF7 251 aa4.6□□□□□ -1.67
UBE2D3-223ENST00000508249 Q8N9L7 120 aa4.59□□□□□ -1.67
UBE2D3-223ENST00000508249 ATP5EP2Q5VTU8 51 aa4.58□□□□□ -1.68
UBE2D3-223ENST00000508249 C7orf65Q6ZTY9 151 aa4.57□□□□□ -1.68
UBE2D3-223ENST00000508249 TP53AIP1Q9HCN2 124 aa4.57□□□□□ -1.68
UBE2D3-223ENST00000508249 KRTAP10-10P60014 251 aa4.53□□□□□ -1.68
UBE2D3-223ENST00000508249 KRTAP20-1Q3LI63 56 aa4.53□□□□□ -1.68
UBE2D3-223ENST00000508249 IGKV2D-30A0A075B6S6 120 aa4.52□□□□□ -1.69
UBE2D3-223ENST00000508249 IGKV2-30P06310 120 aa4.52□□□□□ -1.69
UBE2D3-223ENST00000508249 J3QR89 54 aa4.51□□□□□ -1.69
UBE2D3-223ENST00000508249 Q5W150 140 aa4.51□□□□□ -1.69
UBE2D3-223ENST00000508249 A0A1B0GV90 55 aa4.5□□□□□ -1.69
UBE2D3-223ENST00000508249 LINC00643Q86TS7 51 aa4.5□□□□□ -1.69
UBE2D3-223ENST00000508249 H1FX-AS1Q4G0G2 97 aa4.48□□□□□ -1.69
UBE2D3-223ENST00000508249 MDN1Q9NU22 5596 aa4.48□□□□□ -1.69
UBE2D3-223ENST00000508249 LOC100996750A0A140TA64 210 aa4.47□□□□□ -1.69
UBE2D3-223ENST00000508249 KRTAP4-6Q9BYQ5 205 aa4.47□□□□□ -1.69
UBE2D3-223ENST00000508249 HIST1H4AP62805 103 aaKnown RBP4.45□□□□□ -1.7
UBE2D3-223ENST00000508249 TRAV22A0A0B4J277 110 aa4.44□□□□□ -1.7
UBE2D3-223ENST00000508249 LOC101927531A0A1B0GV80 90 aa4.43□□□□□ -1.7
UBE2D3-223ENST00000508249 ATOX1O00244 68 aa4.43□□□□□ -1.7
UBE2D3-223ENST00000508249 UQCRQO14949 82 aa4.43□□□□□ -1.7
UBE2D3-223ENST00000508249 KMT2DO14686 5537 aa4.42□□□□□ -1.7
UBE2D3-223ENST00000508249 C4orf26Q17RF5 130 aa4.41□□□□□ -1.7
UBE2D3-223ENST00000508249 CYP4F30PQ9H0H9 118 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms