RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 SPANXA2-OT1Q8N9U9 137 aa6.45□□□□□ -1.38
LIN54-207ENST00000508171 DNAH11Q96DT5 4516 aa6.45□□□□□ -1.38
LIN54-207ENST00000508171 CDK2AP2O75956 126 aa6.44□□□□□ -1.38
LIN54-207ENST00000508171 Q1T7F1 81 aa6.44□□□□□ -1.38
LIN54-207ENST00000508171 SPINK6Q6UWN8 80 aa6.44□□□□□ -1.38
LIN54-207ENST00000508171 CIRBP-AS1Q8TBR5 109 aa6.44□□□□□ -1.38
LIN54-207ENST00000508171 PCOTHQ58A44 107 aa6.44□□□□□ -1.38
LIN54-207ENST00000508171 DNAH5Q8TE73 4624 aa6.44□□□□□ -1.38
LIN54-207ENST00000508171 TP53AIP1Q9HCN2 124 aa6.43□□□□□ -1.38
LIN54-207ENST00000508171 PSPHP1O15172 72 aa6.43□□□□□ -1.38
LIN54-207ENST00000508171 MRPL34Q9BQ48 92 aaKnown RBP6.42□□□□□ -1.38
LIN54-207ENST00000508171 CD164Q04900 197 aa6.4□□□□□ -1.38
LIN54-207ENST00000508171 PKD1P98161 4303 aa6.4□□□□□ -1.39
LIN54-207ENST00000508171 HYDINQ4G0P3 5121 aa6.4□□□□□ -1.39
LIN54-207ENST00000508171 IGLV7-46A0A075B6I9 117 aa6.39□□□□□ -1.39
LIN54-207ENST00000508171 A8MUN3 132 aa6.37□□□□□ -1.39
LIN54-207ENST00000508171 LRP1BQ9NZR2 4599 aa6.37□□□□□ -1.39
LIN54-207ENST00000508171 Q5W150 140 aa6.36□□□□□ -1.39
LIN54-207ENST00000508171 KRTAP10-1P60331 282 aa6.36□□□□□ -1.39
LIN54-207ENST00000508171 SSBP3-AS1Q7Z2R9 100 aa6.36□□□□□ -1.39
LIN54-207ENST00000508171 COA5Q86WW8 74 aa6.35□□□□□ -1.39
LIN54-207ENST00000508171 Q8N9P0 234 aaPredicted RBP6.34□□□□□ -1.39
LIN54-207ENST00000508171 VPS13BQ7Z7G8 4022 aa6.34□□□□□ -1.39
LIN54-207ENST00000508171 KRTAP13-2Q52LG2 175 aa6.34□□□□□ -1.39
LIN54-207ENST00000508171 FAT2Q9NYQ8 4349 aa6.34□□□□□ -1.39
LIN54-207ENST00000508171 Q6ZSA8 131 aa6.32□□□□□ -1.4
LIN54-207ENST00000508171 PMAIP1Q13794 54 aa6.31□□□□□ -1.4
LIN54-207ENST00000508171 KRTAP13-3Q3SY46 172 aa6.31□□□□□ -1.4
LIN54-207ENST00000508171 Q5VV11 94 aa6.31□□□□□ -1.4
LIN54-207ENST00000508171 HRES1P13985 223 aa6.28□□□□□ -1.4
LIN54-207ENST00000508171 LINC00313P59037 77 aa6.28□□□□□ -1.4
LIN54-207ENST00000508171 PRR15LQ9BU68 103 aa6.28□□□□□ -1.4
LIN54-207ENST00000508171 A8MU10 97 aa6.27□□□□□ -1.41
LIN54-207ENST00000508171 LIMD2Q9BT23 127 aa6.27□□□□□ -1.41
LIN54-207ENST00000508171 LOC101927531A0A1B0GV80 90 aa6.27□□□□□ -1.41
LIN54-207ENST00000508171 KRTAP1-4P0C5Y4 121 aa6.27□□□□□ -1.41
LIN54-207ENST00000508171 RETNLBQ9BQ08 111 aa6.27□□□□□ -1.41
LIN54-207ENST00000508171 PKHD1P08F94 4074 aa6.26□□□□□ -1.41
LIN54-207ENST00000508171 C8orf87E5RJ46 101 aa6.26□□□□□ -1.41
LIN54-207ENST00000508171 SPAG11AQ6PDA7 123 aa6.25□□□□□ -1.41
LIN54-207ENST00000508171 CHKB-CPT1BH3BT56 60 aa6.24□□□□□ -1.41
LIN54-207ENST00000508171 PLA2G1BP04054 148 aaKnown RBP6.22□□□□□ -1.41
LIN54-207ENST00000508171 KRTAP16-1A8MUX0 517 aa6.2□□□□□ -1.42
LIN54-207ENST00000508171 PRR26Q8N8Z3 221 aa6.2□□□□□ -1.42
LIN54-207ENST00000508171 FAM229AH3BQW9 127 aa6.19□□□□□ -1.42
LIN54-207ENST00000508171 Q75L30 129 aa6.18□□□□□ -1.42
LIN54-207ENST00000508171 LINC01558Q9Y6Z2 57 aa6.18□□□□□ -1.42
LIN54-207ENST00000508171 TYMSOSQ8TAI1 123 aa6.17□□□□□ -1.42
LIN54-207ENST00000508171 A6NED7 52 aa6.16□□□□□ -1.42
LIN54-207ENST00000508171 C4orf48Q5BLP8 95 aa6.16□□□□□ -1.42
LIN54-207ENST00000508171 LCA10Q71F78 164 aa6.16□□□□□ -1.42
LIN54-207ENST00000508171 IGKV2-30P06310 120 aa6.15□□□□□ -1.42
LIN54-207ENST00000508171 ACYP2P14621 99 aa6.15□□□□□ -1.43
LIN54-207ENST00000508171 SMR3BP02814 79 aaPredicted RBP6.13□□□□□ -1.43
LIN54-207ENST00000508171 DMAC1Q96GE9 116 aa6.13□□□□□ -1.43
LIN54-207ENST00000508171 SPINK1P00995 79 aa6.12□□□□□ -1.43
LIN54-207ENST00000508171 SACSQ9NZJ4 4579 aa6.12□□□□□ -1.43
LIN54-207ENST00000508171 IGKV2D-30A0A075B6S6 120 aa6.12□□□□□ -1.43
LIN54-207ENST00000508171 SPINK7P58062 85 aa6.11□□□□□ -1.43
LIN54-207ENST00000508171 SPTSSBQ8NFR3 76 aa6.1□□□□□ -1.43
LIN54-207ENST00000508171 RBM12B-AS1Q9P1G2 102 aa6.09□□□□□ -1.43
LIN54-207ENST00000508171 LINC00304Q8N9R0 145 aa6.08□□□□□ -1.44
LIN54-207ENST00000508171 DYNC1H1Q14204 4646 aaKnown RBP6.06□□□□□ -1.44
LIN54-207ENST00000508171 CDC42SE1Q9NRR8 79 aa6.06□□□□□ -1.44
LIN54-207ENST00000508171 KTN1-AS1Q86SY8 53 aa6.05□□□□□ -1.44
LIN54-207ENST00000508171 FAT1Q14517 4588 aa6.05□□□□□ -1.44
LIN54-207ENST00000508171 KRTAP21-3Q3LHN1 58 aa6.04□□□□□ -1.44
LIN54-207ENST00000508171 ATP11AUNQ6ZP68 121 aa6.04□□□□□ -1.44
LIN54-207ENST00000508171 C7orf65Q6ZTY9 151 aa6.02□□□□□ -1.45
LIN54-207ENST00000508171 A0A1B0GVY2 172 aa6.01□□□□□ -1.45
LIN54-207ENST00000508171 RPS29P62273 56 aaKnown RBP6.01□□□□□ -1.45
LIN54-207ENST00000508171 KRTAP10-4P60372 401 aaPredicted RBP6□□□□□ -1.45
LIN54-207ENST00000508171 C9orf92A6NGG3 77 aa6□□□□□ -1.45
LIN54-207ENST00000508171 APOBP04114 4563 aaKnown RBP5.99□□□□□ -1.45
LIN54-207ENST00000508171 A0A1B0GU69 56 aa5.98□□□□□ -1.45
LIN54-207ENST00000508171 Q8N1X5 172 aa5.98□□□□□ -1.45
LIN54-207ENST00000508171 A6NN06 94 aa5.97□□□□□ -1.45
LIN54-207ENST00000508171 PKHD1L1Q86WI1 4243 aa5.97□□□□□ -1.45
LIN54-207ENST00000508171 KMT2CQ8NEZ4 4911 aaKnown RBP5.94□□□□□ -1.46
LIN54-207ENST00000508171 A8MUU9 505 aa5.91□□□□□ -1.46
LIN54-207ENST00000508171 C20orf166-AS1Q96NR2 134 aa5.91□□□□□ -1.46
LIN54-207ENST00000508171 RYR2Q92736 4967 aa5.91□□□□□ -1.46
LIN54-207ENST00000508171 FLG2Q5D862 2391 aaPredicted RBP5.9□□□□□ -1.47
LIN54-207ENST00000508171 SPATA8Q6RVD6 105 aa5.87□□□□□ -1.47
LIN54-207ENST00000508171 KRTAP3-1Q9BYR8 98 aa5.87□□□□□ -1.47
LIN54-207ENST00000508171 LRP1Q07954 4544 aaKnown RBP5.87□□□□□ -1.47
LIN54-207ENST00000508171 UQCR11O14957 56 aa5.86□□□□□ -1.47
LIN54-207ENST00000508171 MIR22HGQ0VDD5 57 aa5.85□□□□□ -1.47
LIN54-207ENST00000508171 TNXBP22105 4242 aa5.81□□□□□ -1.48
LIN54-207ENST00000508171 H3BS24 57 aa5.8□□□□□ -1.48
LIN54-207ENST00000508171 PRAC1Q96KF2 57 aa5.8□□□□□ -1.48
LIN54-207ENST00000508171 DMBT1Q9UGM3 2413 aaPredicted RBP5.79□□□□□ -1.48
LIN54-207ENST00000508171 FAT3Q8TDW7 4589 aa5.78□□□□□ -1.48
LIN54-207ENST00000508171 HSPG2P98160 4391 aa5.77□□□□□ -1.49
LIN54-207ENST00000508171 KRTAP10-8P60410 259 aa5.76□□□□□ -1.49
LIN54-207ENST00000508171 ADM2Q7Z4H4 148 aa5.76□□□□□ -1.49
LIN54-207ENST00000508171 Q5VSD8 79 aa5.75□□□□□ -1.49
LIN54-207ENST00000508171 KRTAP17-1Q9BYP8 105 aa5.73□□□□□ -1.49
LIN54-207ENST00000508171 COX6B2Q6YFQ2 88 aa5.72□□□□□ -1.49
LIN54-207ENST00000508171 RYR3Q15413 4870 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms