RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 COX7BP24311 80 aa4□□□□□ -1.77
PDGFRA-206ENST00000508170 M0R2N4 97 aa3.99□□□□□ -1.77
PDGFRA-206ENST00000508170 IGLV4-60A0A075B6I1 120 aa3.98□□□□□ -1.77
PDGFRA-206ENST00000508170 PRB2P02812 416 aaPredicted RBP3.98□□□□□ -1.77
PDGFRA-206ENST00000508170 STAB1Q9NY15 2570 aa3.98□□□□□ -1.77
PDGFRA-206ENST00000508170 NOTCH1P46531 2555 aa3.97□□□□□ -1.77
PDGFRA-206ENST00000508170 LINC00575Q6W349 94 aa3.97□□□□□ -1.77
PDGFRA-206ENST00000508170 SMR3AQ99954 134 aa3.97□□□□□ -1.77
PDGFRA-206ENST00000508170 NOP10Q9NPE3 64 aaKnown RBP3.95□□□□□ -1.78
PDGFRA-206ENST00000508170 KRTAP9-2Q9BYQ4 174 aa3.95□□□□□ -1.78
PDGFRA-206ENST00000508170 KCNQ1DNQ9H478 68 aa3.95□□□□□ -1.78
PDGFRA-206ENST00000508170 ANK3Q12955 4377 aaKnown RBP3.94□□□□□ -1.78
PDGFRA-206ENST00000508170 Q8IZM0 81 aa3.94□□□□□ -1.78
PDGFRA-206ENST00000508170 ETDCA0A1B0GVM5 59 aa3.94□□□□□ -1.78
PDGFRA-206ENST00000508170 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.94□□□□□ -1.78
PDGFRA-206ENST00000508170 CLPSL2Q6UWE3 100 aa3.94□□□□□ -1.78
PDGFRA-206ENST00000508170 Q6ZQY7 126 aa3.94□□□□□ -1.78
PDGFRA-206ENST00000508170 KRTAP1-1Q07627 177 aa3.93□□□□□ -1.78
PDGFRA-206ENST00000508170 Q6ZRN7 208 aaPredicted RBP3.93□□□□□ -1.78
PDGFRA-206ENST00000508170 KRTAP13-2Q52LG2 175 aa3.93□□□□□ -1.78
PDGFRA-206ENST00000508170 NSD1Q96L73 2696 aaPredicted RBP3.92□□□□□ -1.78
PDGFRA-206ENST00000508170 KRTAP9-6A0A140TA67 174 aa3.92□□□□□ -1.78
PDGFRA-206ENST00000508170 SSBP3-AS1Q7Z2R9 100 aa3.91□□□□□ -1.78
PDGFRA-206ENST00000508170 NBEAL2Q6ZNJ1 2754 aa3.91□□□□□ -1.78
PDGFRA-206ENST00000508170 KRTAP9-4Q9BYQ2 154 aa3.91□□□□□ -1.78
PDGFRA-206ENST00000508170 HIVEP2P31629 2446 aa3.9□□□□□ -1.79
PDGFRA-206ENST00000508170 VWFP04275 2813 aa3.89□□□□□ -1.79
PDGFRA-206ENST00000508170 KRTAP4-5Q9BYR2 181 aa3.89□□□□□ -1.79
PDGFRA-206ENST00000508170 Q6ZRX8 168 aa3.88□□□□□ -1.79
PDGFRA-206ENST00000508170 PKD1L1Q8TDX9 2849 aa3.88□□□□□ -1.79
PDGFRA-206ENST00000508170 A0A096LPF7 62 aa3.87□□□□□ -1.79
PDGFRA-206ENST00000508170 DEFB130BP0DP73 79 aa3.87□□□□□ -1.79
PDGFRA-206ENST00000508170 DEFB130AP0DP74 79 aa3.87□□□□□ -1.79
PDGFRA-206ENST00000508170 TENM1Q9UKZ4 2725 aa3.87□□□□□ -1.79
PDGFRA-206ENST00000508170 UNQ6190/PRO20217Q6UXQ8 127 aa3.86□□□□□ -1.79
PDGFRA-206ENST00000508170 ANGP03950 147 aaKnown RBP3.86□□□□□ -1.79
PDGFRA-206ENST00000508170 PRO0255Q9UI72 69 aa3.86□□□□□ -1.79
PDGFRA-206ENST00000508170 KRTAP10-3P60369 221 aa3.85□□□□□ -1.79
PDGFRA-206ENST00000508170 PLAC4Q8WY50 150 aa3.85□□□□□ -1.79
PDGFRA-206ENST00000508170 ANAPC11Q9NYG5 84 aa3.85□□□□□ -1.79
PDGFRA-206ENST00000508170 COL6A5A8TX70 2615 aa3.83□□□□□ -1.8
PDGFRA-206ENST00000508170 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
PDGFRA-206ENST00000508170 IGKV2-24A0A0C4DH68 120 aa3.82□□□□□ -1.8
PDGFRA-206ENST00000508170 GVQW2A0A096LPI5 108 aaPredicted RBP3.82□□□□□ -1.8
PDGFRA-206ENST00000508170 DEFB105AQ8NG35 78 aa3.82□□□□□ -1.8
PDGFRA-206ENST00000508170 TRRAPQ9Y4A5 3859 aa3.82□□□□□ -1.8
PDGFRA-206ENST00000508170 LCE3BQ5TA77 95 aa3.81□□□□□ -1.8
PDGFRA-206ENST00000508170 DEFB135Q30KP9 77 aa3.8□□□□□ -1.8
PDGFRA-206ENST00000508170 C6orf48Q9UBA6 75 aa3.8□□□□□ -1.8
PDGFRA-206ENST00000508170 DEFB4AO15263 64 aa3.79□□□□□ -1.8
PDGFRA-206ENST00000508170 KRTAP1-4P0C5Y4 121 aa3.79□□□□□ -1.8
PDGFRA-206ENST00000508170 LY6G6CO95867 125 aa3.78□□□□□ -1.8
PDGFRA-206ENST00000508170 LELP1Q5T871 98 aa3.78□□□□□ -1.8
PDGFRA-206ENST00000508170 SPART-AS1P0CW21 52 aa3.78□□□□□ -1.8
PDGFRA-206ENST00000508170 K7EQZ3 153 aa3.76□□□□□ -1.81
PDGFRA-206ENST00000508170 IGLV5-48A0A075B6I7 105 aa3.75□□□□□ -1.81
PDGFRA-206ENST00000508170 DEFB131BA0A096LNP1 70 aa3.75□□□□□ -1.81
PDGFRA-206ENST00000508170 HTN3P15516 51 aa3.75□□□□□ -1.81
PDGFRA-206ENST00000508170 KRTAP9-9Q9BYP9 154 aa3.75□□□□□ -1.81
PDGFRA-206ENST00000508170 KRTAP2-2Q9BYT5 123 aa3.75□□□□□ -1.81
PDGFRA-206ENST00000508170 TGP01266 2768 aa3.75□□□□□ -1.81
PDGFRA-206ENST00000508170 KRTAP19-1Q8IUB9 90 aa3.74□□□□□ -1.81
PDGFRA-206ENST00000508170 KRTAP4-7Q9BYR0 210 aa3.74□□□□□ -1.81
PDGFRA-206ENST00000508170 PP632Q6XCG6 107 aa3.74□□□□□ -1.81
PDGFRA-206ENST00000508170 WFDC13Q8IUB5 93 aa3.74□□□□□ -1.81
PDGFRA-206ENST00000508170 KRTAP4-8A0A0G2JLE6 195 aa3.73□□□□□ -1.81
PDGFRA-206ENST00000508170 H3BNG1 76 aa3.72□□□□□ -1.81
PDGFRA-206ENST00000508170 WFDC10BQ8IUB3 73 aa3.72□□□□□ -1.81
PDGFRA-206ENST00000508170 ANK2Q01484 3957 aa3.71□□□□□ -1.82
PDGFRA-206ENST00000508170 TENM3Q9P273 2699 aa3.7□□□□□ -1.82
PDGFRA-206ENST00000508170 KRTAP12-2P59991 146 aa3.7□□□□□ -1.82
PDGFRA-206ENST00000508170 CMYA5Q8N3K9 4069 aa3.7□□□□□ -1.82
PDGFRA-206ENST00000508170 MGAM2Q2M2H8 2515 aa3.7□□□□□ -1.82
PDGFRA-206ENST00000508170 CRIPTQ9P021 101 aa3.7□□□□□ -1.82
PDGFRA-206ENST00000508170 IGFL1Q6UW32 110 aa3.68□□□□□ -1.82
PDGFRA-206ENST00000508170 DNAH3Q8TD57 4116 aa3.68□□□□□ -1.82
PDGFRA-206ENST00000508170 KRTAP10-11P60412 298 aa3.67□□□□□ -1.82
PDGFRA-206ENST00000508170 LINC01556Q5JQF7 62 aa3.67□□□□□ -1.82
PDGFRA-206ENST00000508170 BIRC6Q9NR09 4857 aa3.65□□□□□ -1.82
PDGFRA-206ENST00000508170 KRTAP9-7A8MTY7 169 aa3.65□□□□□ -1.83
PDGFRA-206ENST00000508170 RYR3Q15413 4870 aa3.64□□□□□ -1.83
PDGFRA-206ENST00000508170 PCLOQ9Y6V0 5065 aa3.63□□□□□ -1.83
PDGFRA-206ENST00000508170 PCOTHQ58A44 107 aa3.63□□□□□ -1.83
PDGFRA-206ENST00000508170 HMCN1Q96RW7 5635 aa3.63□□□□□ -1.83
PDGFRA-206ENST00000508170 DNAH1Q9P2D7 4330 aa3.63□□□□□ -1.83
PDGFRA-206ENST00000508170 SPRR1AP35321 89 aa3.63□□□□□ -1.83
PDGFRA-206ENST00000508170 MEGF8Q7Z7M0 2845 aa3.63□□□□□ -1.83
PDGFRA-206ENST00000508170 KMT2CQ8NEZ4 4911 aaKnown RBP3.62□□□□□ -1.83
PDGFRA-206ENST00000508170 RPL37P61927 97 aaKnown RBP3.6□□□□□ -1.83
PDGFRA-206ENST00000508170 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
PDGFRA-206ENST00000508170 UBE2DNLQ8IWF7 75 aa3.59□□□□□ -1.83
PDGFRA-206ENST00000508170 HUWE1Q7Z6Z7 4374 aaKnown RBP3.59□□□□□ -1.84
PDGFRA-206ENST00000508170 COL7A1Q02388 2944 aa3.58□□□□□ -1.84
PDGFRA-206ENST00000508170 MT3P25713 68 aa3.58□□□□□ -1.84
PDGFRA-206ENST00000508170 PRLHP81277 87 aa3.58□□□□□ -1.84
PDGFRA-206ENST00000508170 LCE1DQ5T752 114 aa3.58□□□□□ -1.84
PDGFRA-206ENST00000508170 MMP24-AS1A0A0U1RRL7 71 aa3.57□□□□□ -1.84
PDGFRA-206ENST00000508170 PRKDCP78527 4128 aaKnown RBP3.57□□□□□ -1.84
PDGFRA-206ENST00000508170 LCE4AQ5TA78 99 aa3.56□□□□□ -1.84
PDGFRA-206ENST00000508170 STAB2Q8WWQ8 2551 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms