RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 A0A087X002 238 aa8.57□□□□□ -1.04
DDX41-208ENST00000507955 IGHV6-1A0A0B4J1U7 121 aa8.57□□□□□ -1.04
DDX41-208ENST00000507955 NOTCH2NLQ7Z3S9 236 aa8.57□□□□□ -1.04
DDX41-208ENST00000507955 SPINK6Q6UWN8 80 aa8.57□□□□□ -1.04
DDX41-208ENST00000507955 H3BPC8 53 aa8.55□□□□□ -1.04
DDX41-208ENST00000507955 SPANXA2-OT1Q8N9U9 137 aa8.55□□□□□ -1.04
DDX41-208ENST00000507955 ASB16-AS1Q495Z4 193 aa8.53□□□□□ -1.04
DDX41-208ENST00000507955 A8MUN3 132 aa8.51□□□□□ -1.05
DDX41-208ENST00000507955 C8orf17Q9NRJ1 99 aa8.51□□□□□ -1.05
DDX41-208ENST00000507955 SACSQ9NZJ4 4579 aa8.51□□□□□ -1.05
DDX41-208ENST00000507955 C1orf195Q5TG92 126 aa8.5□□□□□ -1.05
DDX41-208ENST00000507955 NDUFS5O43920 106 aa8.49□□□□□ -1.05
DDX41-208ENST00000507955 A0A1B0GVX0 72 aa8.49□□□□□ -1.05
DDX41-208ENST00000507955 PCOTHQ58A44 107 aa8.48□□□□□ -1.05
DDX41-208ENST00000507955 Q6ZSA8 131 aa8.48□□□□□ -1.05
DDX41-208ENST00000507955 CDK2AP2O75956 126 aa8.47□□□□□ -1.05
DDX41-208ENST00000507955 CD164Q04900 197 aa8.47□□□□□ -1.05
DDX41-208ENST00000507955 Q8N9P0 234 aaPredicted RBP8.47□□□□□ -1.05
DDX41-208ENST00000507955 A8MU10 97 aa8.46□□□□□ -1.05
DDX41-208ENST00000507955 KRTAP13-2Q52LG2 175 aa8.46□□□□□ -1.05
DDX41-208ENST00000507955 Q5VV11 94 aa8.46□□□□□ -1.05
DDX41-208ENST00000507955 V9GYY9 64 aa8.46□□□□□ -1.06
DDX41-208ENST00000507955 IGLV7-46A0A075B6I9 117 aa8.45□□□□□ -1.06
DDX41-208ENST00000507955 COA5Q86WW8 74 aa8.44□□□□□ -1.06
DDX41-208ENST00000507955 TP53AIP1Q9HCN2 124 aa8.42□□□□□ -1.06
DDX41-208ENST00000507955 MRPL34Q9BQ48 92 aaKnown RBP8.4□□□□□ -1.07
DDX41-208ENST00000507955 SSBP3-AS1Q7Z2R9 100 aa8.39□□□□□ -1.07
DDX41-208ENST00000507955 KRTAP1-4P0C5Y4 121 aa8.38□□□□□ -1.07
DDX41-208ENST00000507955 PRR15LQ9BU68 103 aa8.38□□□□□ -1.07
DDX41-208ENST00000507955 SEC61GP60059 68 aa8.37□□□□□ -1.07
DDX41-208ENST00000507955 FAT1Q14517 4588 aa8.37□□□□□ -1.07
DDX41-208ENST00000507955 DYNC1H1Q14204 4646 aaKnown RBP8.36□□□□□ -1.07
DDX41-208ENST00000507955 SMR3BP02814 79 aaPredicted RBP8.36□□□□□ -1.07
DDX41-208ENST00000507955 KRTAP21-3Q3LHN1 58 aa8.36□□□□□ -1.07
DDX41-208ENST00000507955 Q5W150 140 aa8.36□□□□□ -1.07
DDX41-208ENST00000507955 LIMD2Q9BT23 127 aa8.36□□□□□ -1.07
DDX41-208ENST00000507955 KMT2CQ8NEZ4 4911 aaKnown RBP8.34□□□□□ -1.07
DDX41-208ENST00000507955 CHKB-CPT1BH3BT56 60 aa8.34□□□□□ -1.07
DDX41-208ENST00000507955 PLA2G1BP04054 148 aaKnown RBP8.33□□□□□ -1.08
DDX41-208ENST00000507955 RETNLBQ9BQ08 111 aa8.33□□□□□ -1.08
DDX41-208ENST00000507955 HRES1P13985 223 aa8.31□□□□□ -1.08
DDX41-208ENST00000507955 KRTAP13-3Q3SY46 172 aa8.3□□□□□ -1.08
DDX41-208ENST00000507955 LOC101927531A0A1B0GV80 90 aa8.3□□□□□ -1.08
DDX41-208ENST00000507955 SPAG11AQ6PDA7 123 aa8.29□□□□□ -1.08
DDX41-208ENST00000507955 PMAIP1Q13794 54 aa8.29□□□□□ -1.08
DDX41-208ENST00000507955 Q75L30 129 aa8.28□□□□□ -1.08
DDX41-208ENST00000507955 LINC00313P59037 77 aa8.27□□□□□ -1.09
DDX41-208ENST00000507955 LCA10Q71F78 164 aa8.27□□□□□ -1.09
DDX41-208ENST00000507955 PRR26Q8N8Z3 221 aa8.25□□□□□ -1.09
DDX41-208ENST00000507955 TYMSOSQ8TAI1 123 aa8.25□□□□□ -1.09
DDX41-208ENST00000507955 APOBP04114 4563 aaKnown RBP8.24□□□□□ -1.09
DDX41-208ENST00000507955 LINC01558Q9Y6Z2 57 aa8.23□□□□□ -1.09
DDX41-208ENST00000507955 RYR2Q92736 4967 aa8.23□□□□□ -1.09
DDX41-208ENST00000507955 A6NED7 52 aa8.22□□□□□ -1.09
DDX41-208ENST00000507955 C4orf48Q5BLP8 95 aa8.2□□□□□ -1.1
DDX41-208ENST00000507955 C8orf87E5RJ46 101 aa8.19□□□□□ -1.1
DDX41-208ENST00000507955 A0A1B0GVY2 172 aa8.17□□□□□ -1.1
DDX41-208ENST00000507955 SPTSSBQ8NFR3 76 aa8.17□□□□□ -1.1
DDX41-208ENST00000507955 KRTAP16-1A8MUX0 517 aa8.17□□□□□ -1.1
DDX41-208ENST00000507955 SPINK7P58062 85 aa8.16□□□□□ -1.1
DDX41-208ENST00000507955 CDC42SE1Q9NRR8 79 aa8.13□□□□□ -1.11
DDX41-208ENST00000507955 SPINK1P00995 79 aa8.12□□□□□ -1.11
DDX41-208ENST00000507955 LINC00304Q8N9R0 145 aa8.12□□□□□ -1.11
DDX41-208ENST00000507955 ATP11AUNQ6ZP68 121 aa8.11□□□□□ -1.11
DDX41-208ENST00000507955 KRTAP10-4P60372 401 aaPredicted RBP8.1□□□□□ -1.11
DDX41-208ENST00000507955 FAM229AH3BQW9 127 aa8.09□□□□□ -1.11
DDX41-208ENST00000507955 DMAC1Q96GE9 116 aa8.08□□□□□ -1.12
DDX41-208ENST00000507955 LRP1Q07954 4544 aaKnown RBP8.08□□□□□ -1.12
DDX41-208ENST00000507955 ACYP2P14621 99 aa8.08□□□□□ -1.12
DDX41-208ENST00000507955 IGKV2D-30A0A075B6S6 120 aa8.07□□□□□ -1.12
DDX41-208ENST00000507955 IGKV2-30P06310 120 aa8.07□□□□□ -1.12
DDX41-208ENST00000507955 A6NN06 94 aa8.07□□□□□ -1.12
DDX41-208ENST00000507955 RYR3Q15413 4870 aa8.07□□□□□ -1.12
DDX41-208ENST00000507955 PKHD1L1Q86WI1 4243 aa8.06□□□□□ -1.12
DDX41-208ENST00000507955 C9orf92A6NGG3 77 aa8.04□□□□□ -1.12
DDX41-208ENST00000507955 KTN1-AS1Q86SY8 53 aa8.01□□□□□ -1.13
DDX41-208ENST00000507955 HSPG2P98160 4391 aa7.96□□□□□ -1.13
DDX41-208ENST00000507955 FLG2Q5D862 2391 aaPredicted RBP7.95□□□□□ -1.14
DDX41-208ENST00000507955 RPS29P62273 56 aaKnown RBP7.92□□□□□ -1.14
DDX41-208ENST00000507955 A0A1B0GU69 56 aa7.91□□□□□ -1.14
DDX41-208ENST00000507955 RBM12B-AS1Q9P1G2 102 aa7.91□□□□□ -1.14
DDX41-208ENST00000507955 TNXBP22105 4242 aa7.9□□□□□ -1.14
DDX41-208ENST00000507955 Q8N1X5 172 aa7.9□□□□□ -1.14
DDX41-208ENST00000507955 KRTAP17-1Q9BYP8 105 aa7.9□□□□□ -1.14
DDX41-208ENST00000507955 DMBT1Q9UGM3 2413 aaPredicted RBP7.9□□□□□ -1.14
DDX41-208ENST00000507955 MYCBP2O75592 4640 aa7.89□□□□□ -1.15
DDX41-208ENST00000507955 C7orf65Q6ZTY9 151 aa7.89□□□□□ -1.15
DDX41-208ENST00000507955 KIAA1109Q2LD37 5005 aa7.87□□□□□ -1.15
DDX41-208ENST00000507955 FAT3Q8TDW7 4589 aa7.86□□□□□ -1.15
DDX41-208ENST00000507955 Q5VSD8 79 aa7.84□□□□□ -1.15
DDX41-208ENST00000507955 RYR1P21817 5038 aa7.82□□□□□ -1.16
DDX41-208ENST00000507955 SPATA8Q6RVD6 105 aa7.82□□□□□ -1.16
DDX41-208ENST00000507955 A8MUU9 505 aa7.81□□□□□ -1.16
DDX41-208ENST00000507955 C20orf166-AS1Q96NR2 134 aa7.81□□□□□ -1.16
DDX41-208ENST00000507955 EPPK1P58107 5090 aaKnown RBP7.79□□□□□ -1.16
DDX41-208ENST00000507955 MIR22HGQ0VDD5 57 aa7.77□□□□□ -1.17
DDX41-208ENST00000507955 ADM2Q7Z4H4 148 aa7.76□□□□□ -1.17
DDX41-208ENST00000507955 UQCR11O14957 56 aa7.76□□□□□ -1.17
DDX41-208ENST00000507955 PRAC1Q96KF2 57 aa7.76□□□□□ -1.17
DDX41-208ENST00000507955 KRTAP10-8P60410 259 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms