RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 MYH4Q9Y623 1939 aa-1.1□□□□□ -2.59
LSM6-205ENST00000507449 A0A1B0GUT8 65 aa-1.1□□□□□ -2.59
LSM6-205ENST00000507449 RGPD1P0DJD0 1748 aa-1.1□□□□□ -2.59
LSM6-205ENST00000507449 ANKRD26Q9UPS8 1709 aa-1.11□□□□□ -2.59
LSM6-205ENST00000507449 IQCF6A8MYZ5 107 aa-1.11□□□□□ -2.59
LSM6-205ENST00000507449 GYPAP02724 150 aa-1.11□□□□□ -2.59
LSM6-205ENST00000507449 GAFA1Q96PS6 74 aa-1.11□□□□□ -2.59
LSM6-205ENST00000507449 LRRC9Q6ZRR7 1453 aa-1.12□□□□□ -2.59
LSM6-205ENST00000507449 MMP24-AS1A0A0U1RRL7 71 aa-1.12□□□□□ -2.59
LSM6-205ENST00000507449 C3orf79P0CE67 100 aa-1.12□□□□□ -2.59
LSM6-205ENST00000507449 PKIAP61925 76 aa-1.12□□□□□ -2.59
LSM6-205ENST00000507449 PLGLAQ15195 96 aa-1.12□□□□□ -2.59
LSM6-205ENST00000507449 UBR3Q6ZT12 1888 aa-1.12□□□□□ -2.59
LSM6-205ENST00000507449 S100A8P05109 93 aa-1.13□□□□□ -2.59
LSM6-205ENST00000507449 PEA15Q15121 130 aa-1.13□□□□□ -2.59
LSM6-205ENST00000507449 PRO3102Q9H379 93 aa-1.13□□□□□ -2.59
LSM6-205ENST00000507449 SPART-AS1P0CW21 52 aa-1.14□□□□□ -2.59
LSM6-205ENST00000507449 SMIM11AP58511 58 aa-1.14□□□□□ -2.59
LSM6-205ENST00000507449 KRTAP19-2Q3LHN2 52 aa-1.14□□□□□ -2.59
LSM6-205ENST00000507449 CEP162Q5TB80 1403 aa-1.15□□□□□ -2.59
LSM6-205ENST00000507449 MYO3AQ8NEV4 1616 aa-1.15□□□□□ -2.59
LSM6-205ENST00000507449 UBR1Q8IWV7 1749 aa-1.15□□□□□ -2.59
LSM6-205ENST00000507449 TRAV21A0A0B4J279 112 aa-1.15□□□□□ -2.59
LSM6-205ENST00000507449 LINC00158P58513 81 aa-1.15□□□□□ -2.59
LSM6-205ENST00000507449 PLXNC1O60486 1568 aa-1.16□□□□□ -2.59
LSM6-205ENST00000507449 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.16□□□□□ -2.59
LSM6-205ENST00000507449 LYNX1G3V0Z9 82 aa-1.16□□□□□ -2.6
LSM6-205ENST00000507449 M0QZ58 72 aa-1.16□□□□□ -2.6
LSM6-205ENST00000507449 VPS13AQ96RL7 3174 aa-1.16□□□□□ -2.6
LSM6-205ENST00000507449 UTRNP46939 3433 aa-1.16□□□□□ -2.6
LSM6-205ENST00000507449 RGPD8O14715 1765 aaPredicted RBP-1.16□□□□□ -2.6
LSM6-205ENST00000507449 RGPD5Q99666 1765 aa-1.16□□□□□ -2.6
LSM6-205ENST00000507449 C4AP0C0L4 1744 aa-1.17□□□□□ -2.6
LSM6-205ENST00000507449 C4BP0C0L5 1744 aa-1.17□□□□□ -2.6
LSM6-205ENST00000507449 LEAP2Q969E1 77 aa-1.17□□□□□ -2.6
LSM6-205ENST00000507449 IGLV5-48A0A075B6I7 105 aa-1.18□□□□□ -2.6
LSM6-205ENST00000507449 CYB5AP00167 134 aa-1.18□□□□□ -2.6
LSM6-205ENST00000507449 DEFB106AQ8N104 65 aa-1.18□□□□□ -2.6
LSM6-205ENST00000507449 USP32Q8NFA0 1604 aa-1.18□□□□□ -2.6
LSM6-205ENST00000507449 AKAP12Q02952 1782 aa-1.19□□□□□ -2.6
LSM6-205ENST00000507449 XIRP2A4UGR9 3374 aa-1.19□□□□□ -2.6
LSM6-205ENST00000507449 MYMXA0A1B0GTQ4 84 aa-1.19□□□□□ -2.6
LSM6-205ENST00000507449 SMARCA2P51531 1590 aa-1.19□□□□□ -2.6
LSM6-205ENST00000507449 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.2□□□□□ -2.6
LSM6-205ENST00000507449 GOLGB1Q14789 3259 aaKnown RBP-1.2□□□□□ -2.6
LSM6-205ENST00000507449 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.2□□□□□ -2.6
LSM6-205ENST00000507449 SUPT6HQ7KZ85 1726 aaKnown RBP-1.21□□□□□ -2.6
LSM6-205ENST00000507449 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.21□□□□□ -2.6
LSM6-205ENST00000507449 POLR1AO95602 1720 aaPredicted RBP-1.22□□□□□ -2.6
LSM6-205ENST00000507449 PYY3Q5JQD4 70 aa-1.22□□□□□ -2.6
LSM6-205ENST00000507449 IFI6P09912 130 aa-1.23□□□□□ -2.61
LSM6-205ENST00000507449 PIK3C2BO00750 1634 aa-1.24□□□□□ -2.61
LSM6-205ENST00000507449 DEFB104AQ8WTQ1 72 aa-1.24□□□□□ -2.61
LSM6-205ENST00000507449 ZNF831Q5JPB2 1677 aa-1.24□□□□□ -2.61
LSM6-205ENST00000507449 MAST1Q9Y2H9 1570 aa-1.25□□□□□ -2.61
LSM6-205ENST00000507449 TMEM131LA2VDJ0 1609 aa-1.25□□□□□ -2.61
LSM6-205ENST00000507449 ANKRD36CQ5JPF3 1778 aa-1.25□□□□□ -2.61
LSM6-205ENST00000507449 DEFB130BP0DP73 79 aa-1.25□□□□□ -2.61
LSM6-205ENST00000507449 DEFB130AP0DP74 79 aa-1.25□□□□□ -2.61
LSM6-205ENST00000507449 PLIN4Q96Q06 1357 aa-1.25□□□□□ -2.61
LSM6-205ENST00000507449 DNMBPQ6XZF7 1577 aa-1.25□□□□□ -2.61
LSM6-205ENST00000507449 SCN11AQ9UI33 1791 aa-1.26□□□□□ -2.61
LSM6-205ENST00000507449 SNRPFP62306 86 aaKnown RBP-1.26□□□□□ -2.61
LSM6-205ENST00000507449 NOP10Q9NPE3 64 aaKnown RBP-1.26□□□□□ -2.61
LSM6-205ENST00000507449 EEA1Q15075 1411 aa-1.26□□□□□ -2.61
LSM6-205ENST00000507449 DOT1LQ8TEK3 1739 aa-1.26□□□□□ -2.61
LSM6-205ENST00000507449 RGPD3A6NKT7 1758 aaPredicted RBP-1.26□□□□□ -2.61
LSM6-205ENST00000507449 RGPD4Q7Z3J3 1758 aa-1.26□□□□□ -2.61
LSM6-205ENST00000507449 CEBPZOSA8MTT3 80 aa-1.27□□□□□ -2.61
LSM6-205ENST00000507449 NDUFB1O75438 58 aa-1.27□□□□□ -2.61
LSM6-205ENST00000507449 IAPPP10997 89 aa-1.27□□□□□ -2.61
LSM6-205ENST00000507449 LINC00643Q86TS7 51 aa-1.27□□□□□ -2.61
LSM6-205ENST00000507449 S100A16Q96FQ6 103 aaKnown RBP-1.27□□□□□ -2.61
LSM6-205ENST00000507449 RABAC1Q9UI14 185 aa-1.27□□□□□ -2.61
LSM6-205ENST00000507449 CCNB3Q8WWL7 1395 aa-1.27□□□□□ -2.61
LSM6-205ENST00000507449 NCOA2Q15596 1464 aa-1.27□□□□□ -2.61
LSM6-205ENST00000507449 NWD1Q149M9 1564 aa-1.27□□□□□ -2.61
LSM6-205ENST00000507449 NRXN3Q9Y4C0 1643 aa-1.27□□□□□ -2.61
LSM6-205ENST00000507449 LY75O60449 1722 aa-1.27□□□□□ -2.61
LSM6-205ENST00000507449 TOGARAM1Q9Y4F4 1720 aa-1.28□□□□□ -2.61
LSM6-205ENST00000507449 WIZO95785 1651 aa-1.28□□□□□ -2.61
LSM6-205ENST00000507449 DEPDC5O75140 1603 aa-1.28□□□□□ -2.61
LSM6-205ENST00000507449 MAGI3Q5TCQ9 1506 aa-1.28□□□□□ -2.61
LSM6-205ENST00000507449 M0QY20 66 aa-1.28□□□□□ -2.61
LSM6-205ENST00000507449 ACYP1P07311 99 aa-1.28□□□□□ -2.61
LSM6-205ENST00000507449 A0A1B0GUL6 1792 aa-1.29□□□□□ -2.62
LSM6-205ENST00000507449 ZC3H13Q5T200 1668 aaKnown RBP-1.29□□□□□ -2.62
LSM6-205ENST00000507449 ERVK-7P63135 1459 aa-1.29□□□□□ -2.62
LSM6-205ENST00000507449 HMGA1P17096 107 aaKnown RBP-1.29□□□□□ -2.62
LSM6-205ENST00000507449 Q9H521 79 aa-1.29□□□□□ -2.62
LSM6-205ENST00000507449 LTN1O94822 1766 aa-1.29□□□□□ -2.62
LSM6-205ENST00000507449 KIF21BO75037 1637 aa-1.29□□□□□ -2.62
LSM6-205ENST00000507449 NESP48681 1621 aa-1.29□□□□□ -2.62
LSM6-205ENST00000507449 IFI27P40305 119 aaPredicted RBP-1.3□□□□□ -2.62
LSM6-205ENST00000507449 V9GYS6 101 aa-1.3□□□□□ -2.62
LSM6-205ENST00000507449 CD52P31358 61 aa-1.31□□□□□ -2.62
LSM6-205ENST00000507449 CROCC2H7BZ55 1655 aa-1.32□□□□□ -2.62
LSM6-205ENST00000507449 WT1-ASQ06250 92 aa-1.32□□□□□ -2.62
LSM6-205ENST00000507449 PARP4Q9UKK3 1724 aaKnown RBP-1.32□□□□□ -2.62
LSM6-205ENST00000507449 ABCC3O15438 1527 aa-1.33□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms