RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, humanhuman

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-205ENST00000507316 LRBAP50851 2863 aa2.55□□□□□ -2
TUSC3-205ENST00000507316 BOD1L1Q8NFC6 3051 aa2.55□□□□□ -2
TUSC3-205ENST00000507316 DCHS1Q96JQ0 3298 aa2.55□□□□□ -2
TUSC3-205ENST00000507316 DMDP11532 3685 aa2.55□□□□□ -2
TUSC3-205ENST00000507316 RIF1Q5UIP0 2472 aaKnown RBP2.54□□□□□ -2
TUSC3-205ENST00000507316 C5orf42Q9H799 3197 aa2.54□□□□□ -2
TUSC3-205ENST00000507316 DEFB4AO15263 64 aa2.54□□□□□ -2
TUSC3-205ENST00000507316 RPS29P62273 56 aaKnown RBP2.54□□□□□ -2
TUSC3-205ENST00000507316 HTTP42858 3142 aa2.54□□□□□ -2
TUSC3-205ENST00000507316 CEP290O15078 2479 aa2.53□□□□□ -2
TUSC3-205ENST00000507316 ATRXP46100 2492 aa2.53□□□□□ -2
TUSC3-205ENST00000507316 NAV2Q8IVL1 2488 aa2.53□□□□□ -2
TUSC3-205ENST00000507316 TLN2Q9Y4G6 2542 aa2.52□□□□□ -2.01
TUSC3-205ENST00000507316 REV3LO60673 3130 aa2.52□□□□□ -2.01
TUSC3-205ENST00000507316 OTOGLQ3ZCN5 2332 aa2.52□□□□□ -2.01
TUSC3-205ENST00000507316 DMXL2Q8TDJ6 3036 aa2.52□□□□□ -2.01
TUSC3-205ENST00000507316 A0A0D9SG42 100 aa2.51□□□□□ -2.01
TUSC3-205ENST00000507316 SPRR5A0A1B0GTR4 108 aa2.51□□□□□ -2.01
TUSC3-205ENST00000507316 FREM2Q5SZK8 3169 aa2.51□□□□□ -2.01
TUSC3-205ENST00000507316 APCP25054 2843 aa2.5□□□□□ -2.01
TUSC3-205ENST00000507316 SPEGQ15772 3267 aa2.5□□□□□ -2.01
TUSC3-205ENST00000507316 F8P00451 2351 aa2.5□□□□□ -2.01
TUSC3-205ENST00000507316 LAMA1P25391 3075 aa2.5□□□□□ -2.01
TUSC3-205ENST00000507316 KRTAP12-1P59990 96 aa2.5□□□□□ -2.01
TUSC3-205ENST00000507316 ZFHX4Q86UP3 3567 aa2.49□□□□□ -2.01
TUSC3-205ENST00000507316 FAM208BQ5VWN6 2430 aa2.49□□□□□ -2.01
TUSC3-205ENST00000507316 WDFY3Q8IZQ1 3526 aa2.48□□□□□ -2.01
TUSC3-205ENST00000507316 LAMA3Q16787 3333 aa2.48□□□□□ -2.01
TUSC3-205ENST00000507316 SONP18583 2426 aaKnown RBP2.47□□□□□ -2.01
TUSC3-205ENST00000507316 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
TUSC3-205ENST00000507316 Q5VSD8 79 aa2.47□□□□□ -2.01
TUSC3-205ENST00000507316 HIVEP3Q5T1R4 2406 aa2.47□□□□□ -2.01
TUSC3-205ENST00000507316 COL12A1Q99715 3063 aa2.46□□□□□ -2.02
TUSC3-205ENST00000507316 BRCA2P51587 3418 aa2.46□□□□□ -2.02
TUSC3-205ENST00000507316 KRTAP13-4Q3LI77 160 aa2.46□□□□□ -2.02
TUSC3-205ENST00000507316 ZNF462Q96JM2 2506 aa2.46□□□□□ -2.02
TUSC3-205ENST00000507316 FN1P02751 2386 aaKnown RBP2.45□□□□□ -2.02
TUSC3-205ENST00000507316 PTPN13Q12923 2485 aa2.45□□□□□ -2.02
TUSC3-205ENST00000507316 CCDC168Q8NDH2 2452 aa2.45□□□□□ -2.02
TUSC3-205ENST00000507316 MUC6Q6W4X9 2439 aa2.45□□□□□ -2.02
TUSC3-205ENST00000507316 SETXQ7Z333 2677 aaKnown RBP2.44□□□□□ -2.02
TUSC3-205ENST00000507316 NF1P21359 2839 aa2.44□□□□□ -2.02
TUSC3-205ENST00000507316 VCANP13611 3396 aa2.44□□□□□ -2.02
TUSC3-205ENST00000507316 ATMQ13315 3056 aa2.43□□□□□ -2.02
TUSC3-205ENST00000507316 VWFP04275 2813 aa2.43□□□□□ -2.02
TUSC3-205ENST00000507316 DMXL1Q9Y485 3027 aa2.43□□□□□ -2.02
TUSC3-205ENST00000507316 CDH23Q9H251 3354 aa2.43□□□□□ -2.02
TUSC3-205ENST00000507316 HRNRQ86YZ3 2850 aaPredicted RBP2.43□□□□□ -2.02
TUSC3-205ENST00000507316 JMJD1CQ15652 2540 aa2.42□□□□□ -2.02
TUSC3-205ENST00000507316 UTP20O75691 2785 aaKnown RBP2.42□□□□□ -2.02
TUSC3-205ENST00000507316 TEX15Q9BXT5 2789 aa2.42□□□□□ -2.02
TUSC3-205ENST00000507316 USP9XQ93008 2570 aaPredicted RBP2.42□□□□□ -2.02
TUSC3-205ENST00000507316 CENPEQ02224 2701 aa2.42□□□□□ -2.02
TUSC3-205ENST00000507316 SPENQ96T58 3664 aaKnown RBP2.42□□□□□ -2.02
TUSC3-205ENST00000507316 CSMD1Q96PZ7 3565 aa2.42□□□□□ -2.02
TUSC3-205ENST00000507316 COL6A5A8TX70 2615 aa2.41□□□□□ -2.02
TUSC3-205ENST00000507316 AKAP9Q99996 3911 aa2.41□□□□□ -2.02
TUSC3-205ENST00000507316 MYO9AB2RTY4 2548 aa2.4□□□□□ -2.02
TUSC3-205ENST00000507316 CELSR1Q9NYQ6 3014 aa2.4□□□□□ -2.02
TUSC3-205ENST00000507316 CRYBG3Q68DQ2 2970 aa2.4□□□□□ -2.03
TUSC3-205ENST00000507316 DOPEY1Q5JWR5 2465 aa2.4□□□□□ -2.03
TUSC3-205ENST00000507316 DCHS2Q6V1P9 2916 aa2.39□□□□□ -2.03
TUSC3-205ENST00000507316 ZFYVE26Q68DK2 2539 aa2.39□□□□□ -2.03
TUSC3-205ENST00000507316 MEGF8Q7Z7M0 2845 aa2.39□□□□□ -2.03
TUSC3-205ENST00000507316 CELSR3Q9NYQ7 3312 aa2.38□□□□□ -2.03
TUSC3-205ENST00000507316 LOC400499M0QZD8 3231 aa2.38□□□□□ -2.03
TUSC3-205ENST00000507316 KRTAP1-4P0C5Y4 121 aa2.38□□□□□ -2.03
TUSC3-205ENST00000507316 ADGRG4Q8IZF6 3080 aa2.38□□□□□ -2.03
TUSC3-205ENST00000507316 MTORP42345 2549 aa2.38□□□□□ -2.03
TUSC3-205ENST00000507316 CEP295Q9C0D2 2601 aa2.38□□□□□ -2.03
TUSC3-205ENST00000507316 SRRM2Q9UQ35 2752 aaKnown RBP2.37□□□□□ -2.03
TUSC3-205ENST00000507316 GCN1Q92616 2671 aaKnown RBP2.37□□□□□ -2.03
TUSC3-205ENST00000507316 SMG1Q96Q15 3661 aaKnown RBP2.36□□□□□ -2.03
TUSC3-205ENST00000507316 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
TUSC3-205ENST00000507316 KRTAP13-2Q52LG2 175 aa2.34□□□□□ -2.03
TUSC3-205ENST00000507316 NIPBLQ6KC79 2804 aaeCLIP2.33□□□□□ -2.04
TUSC3-205ENST00000507316 HELZ2Q9BYK8 2649 aaKnown RBP2.33□□□□□ -2.04
TUSC3-205ENST00000507316 UNC79Q9P2D8 2635 aa2.33□□□□□ -2.04
TUSC3-205ENST00000507316 FBN1P35555 2871 aaKnown RBP2.33□□□□□ -2.04
TUSC3-205ENST00000507316 PIEZO1Q92508 2521 aa2.32□□□□□ -2.04
TUSC3-205ENST00000507316 ANKRD11Q6UB99 2663 aaPredicted RBP2.32□□□□□ -2.04
TUSC3-205ENST00000507316 CHD8Q9HCK8 2581 aa2.32□□□□□ -2.04
TUSC3-205ENST00000507316 BAHCC1Q9P281 2608 aa2.32□□□□□ -2.04
TUSC3-205ENST00000507316 LRRK2Q5S007 2527 aa2.31□□□□□ -2.04
TUSC3-205ENST00000507316 LAMA5O15230 3695 aa2.31□□□□□ -2.04
TUSC3-205ENST00000507316 NBPF19A0A087WUL8 3843 aa2.31□□□□□ -2.04
TUSC3-205ENST00000507316 PKD1L2Q7Z442 2459 aa2.3□□□□□ -2.04
TUSC3-205ENST00000507316 TENM4Q6N022 2769 aa2.3□□□□□ -2.04
TUSC3-205ENST00000507316 NBEAL2Q6ZNJ1 2754 aa2.3□□□□□ -2.04
TUSC3-205ENST00000507316 ACANP16112 2415 aa2.3□□□□□ -2.04
TUSC3-205ENST00000507316 HECTD1Q9ULT8 2610 aa2.3□□□□□ -2.04
TUSC3-205ENST00000507316 CFAP46Q8IYW2 2715 aa2.3□□□□□ -2.04
TUSC3-205ENST00000507316 TNP1P09430 55 aa2.29□□□□□ -2.04
TUSC3-205ENST00000507316 MYO15AQ9UKN7 3530 aa2.29□□□□□ -2.04
TUSC3-205ENST00000507316 SETD2Q9BYW2 2564 aaPredicted RBP2.29□□□□□ -2.04
TUSC3-205ENST00000507316 TGP01266 2768 aa2.28□□□□□ -2.04
TUSC3-205ENST00000507316 VPS13DQ5THJ4 4388 aa2.27□□□□□ -2.05
TUSC3-205ENST00000507316 C9orf92A6NGG3 77 aa2.27□□□□□ -2.05
TUSC3-205ENST00000507316 ASPMQ8IZT6 3477 aa2.26□□□□□ -2.05
TUSC3-205ENST00000507316 DMBT1Q9UGM3 2413 aaPredicted RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms