RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 IGLV5-52A0A0A0MRZ9 124 aa10.48□□□□□ -0.73
NUP54-205ENST00000507257 Q5W150 140 aa10.48□□□□□ -0.73
NUP54-205ENST00000507257 ALMS1Q8TCU4 4167 aa10.48□□□□□ -0.73
NUP54-205ENST00000507257 PRR26Q8N8Z3 221 aa10.48□□□□□ -0.73
NUP54-205ENST00000507257 ZNF861PO60384 105 aa10.47□□□□□ -0.73
NUP54-205ENST00000507257 NBEAL1Q6ZS30 2694 aa10.47□□□□□ -0.73
NUP54-205ENST00000507257 C8orf87E5RJ46 101 aa10.46□□□□□ -0.73
NUP54-205ENST00000507257 DMAC1Q96GE9 116 aa10.46□□□□□ -0.73
NUP54-205ENST00000507257 PSORS1C2Q9UIG4 136 aa10.45□□□□□ -0.74
NUP54-205ENST00000507257 FBN1P35555 2871 aaKnown RBP10.43□□□□□ -0.74
NUP54-205ENST00000507257 COL6A5A8TX70 2615 aa10.38□□□□□ -0.75
NUP54-205ENST00000507257 A0A087WTM6 91 aa10.37□□□□□ -0.75
NUP54-205ENST00000507257 FAM229AH3BQW9 127 aa10.36□□□□□ -0.75
NUP54-205ENST00000507257 ANAPC11Q9NYG5 84 aa10.36□□□□□ -0.75
NUP54-205ENST00000507257 DNAH8Q96JB1 4490 aa10.35□□□□□ -0.75
NUP54-205ENST00000507257 STAB2Q8WWQ8 2551 aa10.35□□□□□ -0.75
NUP54-205ENST00000507257 NUPR2A6NF83 97 aa10.35□□□□□ -0.75
NUP54-205ENST00000507257 PLA2G1BP04054 148 aaKnown RBP10.34□□□□□ -0.75
NUP54-205ENST00000507257 SPATA8Q6RVD6 105 aa10.34□□□□□ -0.75
NUP54-205ENST00000507257 SPINK6Q6UWN8 80 aa10.34□□□□□ -0.75
NUP54-205ENST00000507257 SSBP3-AS1Q7Z2R9 100 aa10.33□□□□□ -0.76
NUP54-205ENST00000507257 LINC00313P59037 77 aa10.32□□□□□ -0.76
NUP54-205ENST00000507257 DNAH7Q8WXX0 4024 aa10.31□□□□□ -0.76
NUP54-205ENST00000507257 A0A1B0GU69 56 aa10.31□□□□□ -0.76
NUP54-205ENST00000507257 RTL8CO15255 209 aa10.31□□□□□ -0.76
NUP54-205ENST00000507257 PLECQ15149 4684 aaKnown RBP10.3□□□□□ -0.76
NUP54-205ENST00000507257 IGKV2-30P06310 120 aa10.3□□□□□ -0.76
NUP54-205ENST00000507257 IGLV7-43P04211 117 aa10.28□□□□□ -0.76
NUP54-205ENST00000507257 CSMD3Q7Z407 3707 aa10.28□□□□□ -0.76
NUP54-205ENST00000507257 CIRBP-AS1Q8TBR5 109 aa10.26□□□□□ -0.77
NUP54-205ENST00000507257 COL7A1Q02388 2944 aa10.25□□□□□ -0.77
NUP54-205ENST00000507257 HECTD4Q9Y4D8 3996 aa10.25□□□□□ -0.77
NUP54-205ENST00000507257 VPS13DQ5THJ4 4388 aa10.24□□□□□ -0.77
NUP54-205ENST00000507257 DNAH17Q9UFH2 4485 aa10.23□□□□□ -0.77
NUP54-205ENST00000507257 UQCR11O14957 56 aa10.22□□□□□ -0.77
NUP54-205ENST00000507257 FRAS1Q86XX4 4008 aa10.21□□□□□ -0.77
NUP54-205ENST00000507257 MIR22HGQ0VDD5 57 aa10.19□□□□□ -0.78
NUP54-205ENST00000507257 KRTAP16-1A8MUX0 517 aa10.17□□□□□ -0.78
NUP54-205ENST00000507257 PRAC1Q96KF2 57 aa10.17□□□□□ -0.78
NUP54-205ENST00000507257 MGAM2Q2M2H8 2515 aa10.13□□□□□ -0.79
NUP54-205ENST00000507257 LINC01554Q52M75 96 aa10.1□□□□□ -0.79
NUP54-205ENST00000507257 ADM2Q7Z4H4 148 aa10.1□□□□□ -0.79
NUP54-205ENST00000507257 IGKV2D-30A0A075B6S6 120 aa10.08□□□□□ -0.8
NUP54-205ENST00000507257 RETNLBQ9BQ08 111 aa10.07□□□□□ -0.8
NUP54-205ENST00000507257 PRKDCP78527 4128 aaKnown RBP10.05□□□□□ -0.8
NUP54-205ENST00000507257 STARD9Q9P2P6 4700 aa10.04□□□□□ -0.8
NUP54-205ENST00000507257 KRTAP13-2Q52LG2 175 aa10.03□□□□□ -0.8
NUP54-205ENST00000507257 DNAH2Q9P225 4427 aa10.01□□□□□ -0.81
NUP54-205ENST00000507257 C1orf134Q5TEV5 83 aa9.99□□□□□ -0.81
NUP54-205ENST00000507257 DNAH11Q96DT5 4516 aa9.94□□□□□ -0.82
NUP54-205ENST00000507257 KMT2AQ03164 3969 aa9.91□□□□□ -0.82
NUP54-205ENST00000507257 FBN3Q75N90 2809 aa9.91□□□□□ -0.82
NUP54-205ENST00000507257 LY6G6CO95867 125 aa9.89□□□□□ -0.83
NUP54-205ENST00000507257 KRTAP1-4P0C5Y4 121 aa9.88□□□□□ -0.83
NUP54-205ENST00000507257 CSAG1Q6PB30 78 aa9.88□□□□□ -0.83
NUP54-205ENST00000507257 Q6ZSA8 131 aa9.86□□□□□ -0.83
NUP54-205ENST00000507257 DNAH5Q8TE73 4624 aa9.85□□□□□ -0.83
NUP54-205ENST00000507257 MEGF8Q7Z7M0 2845 aa9.84□□□□□ -0.83
NUP54-205ENST00000507257 DNAH6Q9C0G6 4158 aa9.84□□□□□ -0.83
NUP54-205ENST00000507257 SPINK1P00995 79 aa9.84□□□□□ -0.83
NUP54-205ENST00000507257 C4orf48Q5BLP8 95 aa9.82□□□□□ -0.84
NUP54-205ENST00000507257 KRTAP10-2P60368 255 aa9.8□□□□□ -0.84
NUP54-205ENST00000507257 A8MUU9 505 aa9.78□□□□□ -0.84
NUP54-205ENST00000507257 RPS29P62273 56 aaKnown RBP9.78□□□□□ -0.84
NUP54-205ENST00000507257 TGP01266 2768 aa9.77□□□□□ -0.85
NUP54-205ENST00000507257 Q8N1X5 172 aa9.76□□□□□ -0.85
NUP54-205ENST00000507257 H0YAA0 97 aa9.75□□□□□ -0.85
NUP54-205ENST00000507257 TYMSOSQ8TAI1 123 aa9.74□□□□□ -0.85
NUP54-205ENST00000507257 KRTAP10-1P60331 282 aa9.71□□□□□ -0.86
NUP54-205ENST00000507257 LRP1BQ9NZR2 4599 aa9.7□□□□□ -0.86
NUP54-205ENST00000507257 A0A1B0GU33 70 aa9.66□□□□□ -0.86
NUP54-205ENST00000507257 KRTAP25-1Q3LHN0 102 aa9.66□□□□□ -0.86
NUP54-205ENST00000507257 LINC00304Q8N9R0 145 aa9.66□□□□□ -0.86
NUP54-205ENST00000507257 H1FX-AS1Q4G0G2 97 aa9.64□□□□□ -0.87
NUP54-205ENST00000507257 C20orf166-AS1Q96NR2 134 aa9.64□□□□□ -0.87
NUP54-205ENST00000507257 VPS13BQ7Z7G8 4022 aa9.6□□□□□ -0.87
NUP54-205ENST00000507257 PKD1P98161 4303 aa9.6□□□□□ -0.87
NUP54-205ENST00000507257 KRTAP3-1Q9BYR8 98 aa9.59□□□□□ -0.87
NUP54-205ENST00000507257 H3BS24 57 aa9.56□□□□□ -0.88
NUP54-205ENST00000507257 SACSQ9NZJ4 4579 aa9.56□□□□□ -0.88
NUP54-205ENST00000507257 FAT2Q9NYQ8 4349 aa9.5□□□□□ -0.89
NUP54-205ENST00000507257 K7ERS5 55 aa9.49□□□□□ -0.89
NUP54-205ENST00000507257 ROMO1P60602 79 aa9.47□□□□□ -0.89
NUP54-205ENST00000507257 COX6B2Q6YFQ2 88 aa9.43□□□□□ -0.9
NUP54-205ENST00000507257 C9orf92A6NGG3 77 aa9.4□□□□□ -0.9
NUP54-205ENST00000507257 PKHD1L1Q86WI1 4243 aa9.38□□□□□ -0.91
NUP54-205ENST00000507257 RPL37P61927 97 aaKnown RBP9.27□□□□□ -0.93
NUP54-205ENST00000507257 HYDINQ4G0P3 5121 aa9.24□□□□□ -0.93
NUP54-205ENST00000507257 KRTAP10-6P60371 365 aaPredicted RBP9.24□□□□□ -0.93
NUP54-205ENST00000507257 APOBP04114 4563 aaKnown RBP9.22□□□□□ -0.93
NUP54-205ENST00000507257 PKHD1P08F94 4074 aa9.21□□□□□ -0.93
NUP54-205ENST00000507257 KRTAP10-4P60372 401 aaPredicted RBP9.19□□□□□ -0.94
NUP54-205ENST00000507257 KRTAP3-3Q9BYR6 98 aa9.18□□□□□ -0.94
NUP54-205ENST00000507257 CRIPTQ9P021 101 aa9.17□□□□□ -0.94
NUP54-205ENST00000507257 FLG2Q5D862 2391 aaPredicted RBP9.17□□□□□ -0.94
NUP54-205ENST00000507257 P0C880 135 aa9.14□□□□□ -0.95
NUP54-205ENST00000507257 KRTAP3-2Q9BYR7 98 aa9.14□□□□□ -0.95
NUP54-205ENST00000507257 KRTAP13-4Q3LI77 160 aa9.13□□□□□ -0.95
NUP54-205ENST00000507257 SMR3BP02814 79 aaPredicted RBP9.11□□□□□ -0.95
NUP54-205ENST00000507257 DYNC1H1Q14204 4646 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms