RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 CHTF8P0CG12 524 aa3.53□□□□□ -1.84
CLDND1-213ENST00000506927 PLAC8Q9NZF1 115 aa3.53□□□□□ -1.84
CLDND1-213ENST00000506927 PCOTHQ58A44 107 aa3.52□□□□□ -1.85
CLDND1-213ENST00000506927 SPTSSBQ8NFR3 76 aa3.52□□□□□ -1.85
CLDND1-213ENST00000506927 Q96NJ1 140 aa3.52□□□□□ -1.85
CLDND1-213ENST00000506927 TEP1Q99973 2627 aaKnown RBP3.52□□□□□ -1.85
CLDND1-213ENST00000506927 A0A087WTM6 91 aa3.51□□□□□ -1.85
CLDND1-213ENST00000506927 A0A0G2JQZ4 141 aa3.51□□□□□ -1.85
CLDND1-213ENST00000506927 SPAG11AQ6PDA7 123 aa3.51□□□□□ -1.85
CLDND1-213ENST00000506927 RTL8CO15255 209 aa3.5□□□□□ -1.85
CLDND1-213ENST00000506927 NIPBLQ6KC79 2804 aaeCLIP3.5□□□□□ -1.85
CLDND1-213ENST00000506927 UNC79Q9P2D8 2635 aa3.5□□□□□ -1.85
CLDND1-213ENST00000506927 CUBNO60494 3623 aa3.49□□□□□ -1.85
CLDND1-213ENST00000506927 HRES1P13985 223 aa3.49□□□□□ -1.85
CLDND1-213ENST00000506927 LINC00313P59037 77 aa3.49□□□□□ -1.85
CLDND1-213ENST00000506927 Q6ZRN7 208 aaPredicted RBP3.49□□□□□ -1.85
CLDND1-213ENST00000506927 C7orf65Q6ZTY9 151 aa3.49□□□□□ -1.85
CLDND1-213ENST00000506927 PSORS1C2Q9UIG4 136 aa3.49□□□□□ -1.85
CLDND1-213ENST00000506927 PRB2P02812 416 aaPredicted RBP3.48□□□□□ -1.85
CLDND1-213ENST00000506927 IGLV7-43P04211 117 aa3.48□□□□□ -1.85
CLDND1-213ENST00000506927 A0A1B0GU69 56 aa3.47□□□□□ -1.85
CLDND1-213ENST00000506927 C1orf134Q5TEV5 83 aa3.47□□□□□ -1.85
CLDND1-213ENST00000506927 KRTAP11-1Q8IUC1 163 aa3.47□□□□□ -1.85
CLDND1-213ENST00000506927 NSD1Q96L73 2696 aaPredicted RBP3.47□□□□□ -1.85
CLDND1-213ENST00000506927 ITPR2Q14571 2701 aa3.47□□□□□ -1.85
CLDND1-213ENST00000506927 TENM4Q6N022 2769 aa3.46□□□□□ -1.85
CLDND1-213ENST00000506927 CIRBP-AS1Q8TBR5 109 aa3.46□□□□□ -1.86
CLDND1-213ENST00000506927 DMAC1Q96GE9 116 aa3.46□□□□□ -1.86
CLDND1-213ENST00000506927 FASNP49327 2511 aaKnown RBP3.46□□□□□ -1.86
CLDND1-213ENST00000506927 HIVEP1P15822 2718 aa3.45□□□□□ -1.86
CLDND1-213ENST00000506927 A6NN06 94 aa3.45□□□□□ -1.86
CLDND1-213ENST00000506927 MT3P25713 68 aa3.45□□□□□ -1.86
CLDND1-213ENST00000506927 KRTAP10-7P60409 375 aaPredicted RBP3.45□□□□□ -1.86
CLDND1-213ENST00000506927 LCA10Q71F78 164 aa3.45□□□□□ -1.86
CLDND1-213ENST00000506927 ATRQ13535 2644 aa3.44□□□□□ -1.86
CLDND1-213ENST00000506927 UQCR11O14957 56 aa3.44□□□□□ -1.86
CLDND1-213ENST00000506927 KRTAP10-6P60371 365 aaPredicted RBP3.44□□□□□ -1.86
CLDND1-213ENST00000506927 SPINK6Q6UWN8 80 aa3.44□□□□□ -1.86
CLDND1-213ENST00000506927 VWFP04275 2813 aa3.43□□□□□ -1.86
CLDND1-213ENST00000506927 KRTAP13-3Q3SY46 172 aa3.42□□□□□ -1.86
CLDND1-213ENST00000506927 OTOGQ6ZRI0 2925 aa3.41□□□□□ -1.86
CLDND1-213ENST00000506927 PANO1I0J062 215 aa3.41□□□□□ -1.86
CLDND1-213ENST00000506927 SPINK1P00995 79 aa3.41□□□□□ -1.86
CLDND1-213ENST00000506927 SPATA8Q6RVD6 105 aa3.41□□□□□ -1.86
CLDND1-213ENST00000506927 RBM12B-AS1Q9P1G2 102 aa3.41□□□□□ -1.86
CLDND1-213ENST00000506927 DNAH1Q9P2D7 4330 aa3.41□□□□□ -1.86
CLDND1-213ENST00000506927 HELZ2Q9BYK8 2649 aaKnown RBP3.4□□□□□ -1.86
CLDND1-213ENST00000506927 RPS29P62273 56 aaKnown RBP3.4□□□□□ -1.87
CLDND1-213ENST00000506927 MIR22HGQ0VDD5 57 aa3.4□□□□□ -1.87
CLDND1-213ENST00000506927 Q5W150 140 aa3.4□□□□□ -1.87
CLDND1-213ENST00000506927 SPINK7P58062 85 aa3.39□□□□□ -1.87
CLDND1-213ENST00000506927 SEC61BP60468 96 aaKnown RBP3.39□□□□□ -1.87
CLDND1-213ENST00000506927 RETNLBQ9BQ08 111 aa3.39□□□□□ -1.87
CLDND1-213ENST00000506927 TENM1Q9UKZ4 2725 aa3.39□□□□□ -1.87
CLDND1-213ENST00000506927 MAST4O15021 2626 aa3.36□□□□□ -1.87
CLDND1-213ENST00000506927 NOTCH2NLQ7Z3S9 236 aa3.36□□□□□ -1.87
CLDND1-213ENST00000506927 DNAH3Q8TD57 4116 aa3.36□□□□□ -1.87
CLDND1-213ENST00000506927 ANAPC11Q9NYG5 84 aa3.35□□□□□ -1.87
CLDND1-213ENST00000506927 K7ERS5 55 aa3.34□□□□□ -1.87
CLDND1-213ENST00000506927 LY6G6CO95867 125 aa3.34□□□□□ -1.87
CLDND1-213ENST00000506927 TYMSOSQ8TAI1 123 aa3.34□□□□□ -1.87
CLDND1-213ENST00000506927 TRRAPQ9Y4A5 3859 aa3.34□□□□□ -1.87
CLDND1-213ENST00000506927 HUWE1Q7Z6Z7 4374 aaKnown RBP3.33□□□□□ -1.88
CLDND1-213ENST00000506927 PKD1L1Q8TDX9 2849 aa3.33□□□□□ -1.88
CLDND1-213ENST00000506927 F8P00451 2351 aa3.32□□□□□ -1.88
CLDND1-213ENST00000506927 TENM3Q9P273 2699 aa3.32□□□□□ -1.88
CLDND1-213ENST00000506927 A8MU10 97 aa3.32□□□□□ -1.88
CLDND1-213ENST00000506927 Q6ZSA8 131 aa3.32□□□□□ -1.88
CLDND1-213ENST00000506927 FLNBO75369 2602 aaKnown RBP3.32□□□□□ -1.88
CLDND1-213ENST00000506927 KRTAP16-1A8MUX0 517 aa3.31□□□□□ -1.88
CLDND1-213ENST00000506927 ANK2Q01484 3957 aa3.3□□□□□ -1.88
CLDND1-213ENST00000506927 HECTD1Q9ULT8 2610 aa3.3□□□□□ -1.88
CLDND1-213ENST00000506927 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
CLDND1-213ENST00000506927 KRTAP5-11Q6L8G4 156 aa3.3□□□□□ -1.88
CLDND1-213ENST00000506927 TENM2Q9NT68 2774 aa3.3□□□□□ -1.88
CLDND1-213ENST00000506927 CMYA5Q8N3K9 4069 aa3.3□□□□□ -1.88
CLDND1-213ENST00000506927 KRTAP13-2Q52LG2 175 aa3.29□□□□□ -1.88
CLDND1-213ENST00000506927 LINC01554Q52M75 96 aa3.29□□□□□ -1.88
CLDND1-213ENST00000506927 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
CLDND1-213ENST00000506927 LINC00304Q8N9R0 145 aa3.29□□□□□ -1.88
CLDND1-213ENST00000506927 DYNC2H1Q8NCM8 4307 aaKnown RBP3.29□□□□□ -1.88
CLDND1-213ENST00000506927 BAHCC1Q9P281 2608 aa3.28□□□□□ -1.88
CLDND1-213ENST00000506927 FBN1P35555 2871 aaKnown RBP3.26□□□□□ -1.89
CLDND1-213ENST00000506927 KRTAP1-4P0C5Y4 121 aa3.25□□□□□ -1.89
CLDND1-213ENST00000506927 STAB1Q9NY15 2570 aa3.25□□□□□ -1.89
CLDND1-213ENST00000506927 DNAH9Q9NYC9 4486 aa3.24□□□□□ -1.89
CLDND1-213ENST00000506927 NBEAL1Q6ZS30 2694 aa3.24□□□□□ -1.89
CLDND1-213ENST00000506927 A0A1B0GU33 70 aa3.24□□□□□ -1.89
CLDND1-213ENST00000506927 C20orf166-AS1Q96NR2 134 aa3.24□□□□□ -1.89
CLDND1-213ENST00000506927 A8MUU9 505 aa3.23□□□□□ -1.89
CLDND1-213ENST00000506927 KRTAP10-1P60331 282 aa3.23□□□□□ -1.89
CLDND1-213ENST00000506927 ALMS1Q8TCU4 4167 aa3.22□□□□□ -1.89
CLDND1-213ENST00000506927 DNAH10Q8IVF4 4471 aa3.21□□□□□ -1.89
CLDND1-213ENST00000506927 H1FX-AS1Q4G0G2 97 aa3.21□□□□□ -1.9
CLDND1-213ENST00000506927 NOTCH1P46531 2555 aa3.21□□□□□ -1.9
CLDND1-213ENST00000506927 VPS13DQ5THJ4 4388 aa3.2□□□□□ -1.9
CLDND1-213ENST00000506927 COX6B2Q6YFQ2 88 aa3.19□□□□□ -1.9
CLDND1-213ENST00000506927 PRAC1Q96KF2 57 aa3.19□□□□□ -1.9
CLDND1-213ENST00000506927 SRRM2Q9UQ35 2752 aaKnown RBP3.18□□□□□ -1.9
CLDND1-213ENST00000506927 CSAG1Q6PB30 78 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms