RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 HIST1H4AP62805 103 aaKnown RBP2.04□□□□□ -2.08
HERC4-213ENST00000506515 ADIRFQ15847 76 aa2.04□□□□□ -2.08
HERC4-213ENST00000506515 MEIG1Q5JSS6 88 aa2.04□□□□□ -2.08
HERC4-213ENST00000506515 MUC12Q9UKN1 5478 aa2.04□□□□□ -2.08
HERC4-213ENST00000506515 LOC107984156A0A0G2JMH3 177 aa2.03□□□□□ -2.08
HERC4-213ENST00000506515 TRBV10-3A0A0K0K1G6 114 aa2.03□□□□□ -2.08
HERC4-213ENST00000506515 TEX49A0A1B0GTD5 131 aa2.03□□□□□ -2.08
HERC4-213ENST00000506515 MYMXA0A1B0GTQ4 84 aa2.03□□□□□ -2.08
HERC4-213ENST00000506515 NDUFC2O95298 119 aa2.03□□□□□ -2.08
HERC4-213ENST00000506515 MT-ND4LP03901 98 aa2.03□□□□□ -2.08
HERC4-213ENST00000506515 NDUFA6P56556 154 aa2.03□□□□□ -2.08
HERC4-213ENST00000506515 KRTAP19-6Q3LI70 58 aa2.03□□□□□ -2.08
HERC4-213ENST00000506515 ARL17AQ8IVW1 177 aa2.03□□□□□ -2.08
HERC4-213ENST00000506515 TCTE3Q8IZS6 198 aa2.03□□□□□ -2.08
HERC4-213ENST00000506515 SIGMAR1Q99720 223 aa2.03□□□□□ -2.08
HERC4-213ENST00000506515 BATF3Q9NR55 127 aa2.03□□□□□ -2.08
HERC4-213ENST00000506515 IGLC3P0DOY3 106 aa2.02□□□□□ -2.09
HERC4-213ENST00000506515 HIST1H2BOP23527 126 aa2.02□□□□□ -2.09
HERC4-213ENST00000506515 HIST1H2BBP33778 126 aa2.02□□□□□ -2.09
HERC4-213ENST00000506515 HIST1H2BDP58876 126 aa2.02□□□□□ -2.09
HERC4-213ENST00000506515 HIST1H2BCP62807 126 aa2.02□□□□□ -2.09
HERC4-213ENST00000506515 RHEBQ15382 184 aa2.02□□□□□ -2.09
HERC4-213ENST00000506515 HIST2H2BEQ16778 126 aa2.02□□□□□ -2.09
HERC4-213ENST00000506515 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.02□□□□□ -2.09
HERC4-213ENST00000506515 TMEM170BQ5T4T1 132 aa2.02□□□□□ -2.09
HERC4-213ENST00000506515 HRCT1Q6UXD1 115 aa2.02□□□□□ -2.09
HERC4-213ENST00000506515 HIST1H2BHQ93079 126 aa2.02□□□□□ -2.09
HERC4-213ENST00000506515 HIST1H2BNQ99877 126 aa2.02□□□□□ -2.09
HERC4-213ENST00000506515 HIST1H2BMQ99879 126 aa2.02□□□□□ -2.09
HERC4-213ENST00000506515 TRAV23DV6A0A075B6W5 121 aa2.01□□□□□ -2.09
HERC4-213ENST00000506515 KRTAP20-1Q3LI63 56 aa2.01□□□□□ -2.09
HERC4-213ENST00000506515 C7orf65Q6ZTY9 151 aa2.01□□□□□ -2.09
HERC4-213ENST00000506515 LINC01546A6NGU7 62 aa2□□□□□ -2.09
HERC4-213ENST00000506515 NCR3O14931 201 aa2□□□□□ -2.09
HERC4-213ENST00000506515 ERC2-IT1O76042 136 aa2□□□□□ -2.09
HERC4-213ENST00000506515 SMIM13P0DJ93 91 aa2□□□□□ -2.09
HERC4-213ENST00000506515 BAGE3Q86Y29 109 aa2□□□□□ -2.09
HERC4-213ENST00000506515 NAA38Q9BRA0 125 aaKnown RBP2□□□□□ -2.09
HERC4-213ENST00000506515 NHP2Q9NX24 153 aaKnown RBP2□□□□□ -2.09
HERC4-213ENST00000506515 TRBV7-6A0A0J9YX20 115 aa1.99□□□□□ -2.09
HERC4-213ENST00000506515 F8WEM9 126 aa1.99□□□□□ -2.09
HERC4-213ENST00000506515 HBDP02042 147 aa1.99□□□□□ -2.09
HERC4-213ENST00000506515 S100PP25815 95 aa1.99□□□□□ -2.09
HERC4-213ENST00000506515 Q6JHZ5 121 aa1.99□□□□□ -2.09
HERC4-213ENST00000506515 COPS9Q8WXC6 57 aa1.99□□□□□ -2.09
HERC4-213ENST00000506515 ADCYAP1P18509 176 aa1.98□□□□□ -2.09
HERC4-213ENST00000506515 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
HERC4-213ENST00000506515 Q96NJ1 140 aa1.98□□□□□ -2.09
HERC4-213ENST00000506515 SEC11CQ9BY50 192 aa1.98□□□□□ -2.09
HERC4-213ENST00000506515 SS18L2Q9UHA2 77 aa1.98□□□□□ -2.09
HERC4-213ENST00000506515 TRAV13-2A0A0B4J235 113 aa1.97□□□□□ -2.09
HERC4-213ENST00000506515 TRAV12-1A0A0B4J245 112 aa1.97□□□□□ -2.09
HERC4-213ENST00000506515 MT2AP02795 61 aa1.97□□□□□ -2.09
HERC4-213ENST00000506515 COX7BP24311 80 aa1.97□□□□□ -2.09
HERC4-213ENST00000506515 DEFB105AQ8NG35 78 aa1.97□□□□□ -2.09
HERC4-213ENST00000506515 OR13C6PQ8NH95 151 aa1.97□□□□□ -2.09
HERC4-213ENST00000506515 OBSCN-AS1Q96MR7 158 aa1.97□□□□□ -2.09
HERC4-213ENST00000506515 KMT2DO14686 5537 aa1.96□□□□□ -2.1
HERC4-213ENST00000506515 SNCGO76070 127 aa1.96□□□□□ -2.1
HERC4-213ENST00000506515 KRTAP2-3P0C7H8 128 aa1.96□□□□□ -2.1
HERC4-213ENST00000506515 SPANXDQ9BXN6 97 aa1.96□□□□□ -2.1
HERC4-213ENST00000506515 KRTAP2-4Q9BYR9 128 aa1.96□□□□□ -2.1
HERC4-213ENST00000506515 MDN1Q9NU22 5596 aa1.96□□□□□ -2.1
HERC4-213ENST00000506515 FXYD2P54710 66 aa1.95□□□□□ -2.1
HERC4-213ENST00000506515 SPANXCQ9NY87 97 aa1.95□□□□□ -2.1
HERC4-213ENST00000506515 IGLV5-48A0A075B6I7 105 aa1.94□□□□□ -2.1
HERC4-213ENST00000506515 PLNP26678 52 aa1.94□□□□□ -2.1
HERC4-213ENST00000506515 ELOF1P60002 83 aaKnown RBP1.94□□□□□ -2.1
HERC4-213ENST00000506515 NDUFA5Q16718 116 aa1.94□□□□□ -2.1
HERC4-213ENST00000506515 TRBV7-7A0A0K0K1E9 115 aa1.93□□□□□ -2.1
HERC4-213ENST00000506515 MT1FP04733 61 aa1.93□□□□□ -2.1
HERC4-213ENST00000506515 C3orf79P0CE67 100 aa1.93□□□□□ -2.1
HERC4-213ENST00000506515 Q1T7F1 81 aa1.93□□□□□ -2.1
HERC4-213ENST00000506515 PPDPFLQ8WWR9 84 aa1.93□□□□□ -2.1
HERC4-213ENST00000506515 CLEC2BQ92478 149 aa1.93□□□□□ -2.1
HERC4-213ENST00000506515 CHCHD1Q96BP2 118 aaKnown RBP1.93□□□□□ -2.1
HERC4-213ENST00000506515 OCIAD2Q56VL3 154 aa1.92□□□□□ -2.1
HERC4-213ENST00000506515 IFI27L1Q96BM0 104 aa1.92□□□□□ -2.1
HERC4-213ENST00000506515 SNHG12Q9BXW3 62 aa1.92□□□□□ -2.1
HERC4-213ENST00000506515 A6NN06 94 aa1.91□□□□□ -2.1
HERC4-213ENST00000506515 TIMM17BO60830 172 aa1.91□□□□□ -2.1
HERC4-213ENST00000506515 SOSTDC1Q6X4U4 206 aa1.91□□□□□ -2.1
HERC4-213ENST00000506515 HIST3H2BBQ8N257 126 aa1.9□□□□□ -2.11
HERC4-213ENST00000506515 C12orf57Q99622 126 aa1.9□□□□□ -2.11
HERC4-213ENST00000506515 HSPB8Q9UJY1 196 aa1.9□□□□□ -2.11
HERC4-213ENST00000506515 DPM2O94777 84 aa1.89□□□□□ -2.11
HERC4-213ENST00000506515 IFITM1P13164 125 aa1.89□□□□□ -2.11
HERC4-213ENST00000506515 LINC01554Q52M75 96 aa1.89□□□□□ -2.11
HERC4-213ENST00000506515 TEN1Q86WV5 123 aa1.89□□□□□ -2.11
HERC4-213ENST00000506515 LINC00308Q8TCZ7 52 aa1.89□□□□□ -2.11
HERC4-213ENST00000506515 DSCR8Q96T75 97 aa1.89□□□□□ -2.11
HERC4-213ENST00000506515 KRTAP2-1Q9BYU5 128 aa1.89□□□□□ -2.11
HERC4-213ENST00000506515 hADV29S1A0JD25 119 aa1.88□□□□□ -2.11
HERC4-213ENST00000506515 LEPROTL1O95214 131 aa1.88□□□□□ -2.11
HERC4-213ENST00000506515 IGKCP01834 107 aa1.88□□□□□ -2.11
HERC4-213ENST00000506515 TRGC2P03986 189 aa1.88□□□□□ -2.11
HERC4-213ENST00000506515 LYRM7Q5U5X0 104 aa1.88□□□□□ -2.11
HERC4-213ENST00000506515 LCA10Q71F78 164 aa1.88□□□□□ -2.11
HERC4-213ENST00000506515 C18orf32Q8TCD1 76 aa1.88□□□□□ -2.11
HERC4-213ENST00000506515 GPR98Q8WXG9 6306 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms