RNA–Protein interactions for RNA: ENST00000506401.6

ITGA3-207, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-207ENST00000506401 PRR15Q8IV56 129 aa10.17□□□□□ -0.78
ITGA3-207ENST00000506401 FAM236AA0A1B0GUQ0 79 aa10.14□□□□□ -0.79
ITGA3-207ENST00000506401 FAM236BA0A1B0GV22 79 aa10.14□□□□□ -0.79
ITGA3-207ENST00000506401 MT1HL1P0DM35 61 aa10.14□□□□□ -0.79
ITGA3-207ENST00000506401 TNXBP22105 4242 aa10.13□□□□□ -0.79
ITGA3-207ENST00000506401 HERC2O95714 4834 aa10.13□□□□□ -0.79
ITGA3-207ENST00000506401 A0A1B0GVX0 72 aa10.12□□□□□ -0.79
ITGA3-207ENST00000506401 UQCRQO14949 82 aa10.12□□□□□ -0.79
ITGA3-207ENST00000506401 IGHV6-1A0A0B4J1U7 121 aa10.1□□□□□ -0.79
ITGA3-207ENST00000506401 MYCBP2O75592 4640 aa10.1□□□□□ -0.79
ITGA3-207ENST00000506401 KRTAP29-1A8MX34 341 aaPredicted RBP10.1□□□□□ -0.79
ITGA3-207ENST00000506401 HCG22E2RYF7 251 aa10.09□□□□□ -0.79
ITGA3-207ENST00000506401 DMBT1Q9UGM3 2413 aaPredicted RBP10.08□□□□□ -0.8
ITGA3-207ENST00000506401 C8orf17Q9NRJ1 99 aa10.05□□□□□ -0.8
ITGA3-207ENST00000506401 COX7CP15954 63 aa10.04□□□□□ -0.8
ITGA3-207ENST00000506401 RPS28P62857 69 aaKnown RBP10.04□□□□□ -0.8
ITGA3-207ENST00000506401 WFDC13Q8IUB5 93 aa10.04□□□□□ -0.8
ITGA3-207ENST00000506401 MMP24-AS1A0A0U1RRL7 71 aa10.03□□□□□ -0.8
ITGA3-207ENST00000506401 C8orf87E5RJ46 101 aa10.03□□□□□ -0.8
ITGA3-207ENST00000506401 CASC2Q6XLA1 102 aa10.03□□□□□ -0.8
ITGA3-207ENST00000506401 ATOX1O00244 68 aa10.03□□□□□ -0.8
ITGA3-207ENST00000506401 RETNLBQ9BQ08 111 aa10.03□□□□□ -0.8
ITGA3-207ENST00000506401 ABCA13Q86UQ4 5058 aa10.01□□□□□ -0.81
ITGA3-207ENST00000506401 hDV103S1A0JD37 113 aa10.01□□□□□ -0.81
ITGA3-207ENST00000506401 LINC00313P59037 77 aa10□□□□□ -0.81
ITGA3-207ENST00000506401 C5orf47Q569G3 176 aa10□□□□□ -0.81
ITGA3-207ENST00000506401 NOTCH2NLQ7Z3S9 236 aa9.99□□□□□ -0.81
ITGA3-207ENST00000506401 J3QL48 77 aa9.98□□□□□ -0.81
ITGA3-207ENST00000506401 FP248Q71RG6 208 aaPredicted RBP9.96□□□□□ -0.82
ITGA3-207ENST00000506401 TMEM254Q8TBM7 123 aa9.96□□□□□ -0.82
ITGA3-207ENST00000506401 MRPL34Q9BQ48 92 aaKnown RBP9.93□□□□□ -0.82
ITGA3-207ENST00000506401 TMEM258P61165 79 aa9.92□□□□□ -0.82
ITGA3-207ENST00000506401 TRAV7A0A075B6U4 112 aa9.89□□□□□ -0.83
ITGA3-207ENST00000506401 SERP2Q8N6R1 65 aa9.89□□□□□ -0.83
ITGA3-207ENST00000506401 OCR1Q9BZK8 76 aa9.89□□□□□ -0.83
ITGA3-207ENST00000506401 IGLV7-46A0A075B6I9 117 aa9.87□□□□□ -0.83
ITGA3-207ENST00000506401 NDUFS5O43920 106 aa9.87□□□□□ -0.83
ITGA3-207ENST00000506401 C9orf92A6NGG3 77 aa9.86□□□□□ -0.83
ITGA3-207ENST00000506401 KRTAP16-1A8MUX0 517 aa9.86□□□□□ -0.83
ITGA3-207ENST00000506401 PRR4Q16378 134 aa9.84□□□□□ -0.83
ITGA3-207ENST00000506401 TP53AIP1Q9HCN2 124 aa9.84□□□□□ -0.83
ITGA3-207ENST00000506401 Q8N9P0 234 aaPredicted RBP9.82□□□□□ -0.84
ITGA3-207ENST00000506401 CYSTM1Q9H1C7 97 aa9.79□□□□□ -0.84
ITGA3-207ENST00000506401 KRTAP13-3Q3SY46 172 aa9.75□□□□□ -0.85
ITGA3-207ENST00000506401 C20orf166-AS1Q96NR2 134 aa9.73□□□□□ -0.85
ITGA3-207ENST00000506401 TRAV22A0A0B4J277 110 aa9.72□□□□□ -0.85
ITGA3-207ENST00000506401 A8MUU9 505 aa9.72□□□□□ -0.85
ITGA3-207ENST00000506401 MP68P56378 58 aa9.71□□□□□ -0.85
ITGA3-207ENST00000506401 PCLOQ9Y6V0 5065 aa9.71□□□□□ -0.86
ITGA3-207ENST00000506401 H0Y9P7 68 aa9.7□□□□□ -0.86
ITGA3-207ENST00000506401 TPRXLQ17RH7 258 aa9.7□□□□□ -0.86
ITGA3-207ENST00000506401 C20orf197Q8N268 126 aa9.7□□□□□ -0.86
ITGA3-207ENST00000506401 Q5W150 140 aa9.67□□□□□ -0.86
ITGA3-207ENST00000506401 Q75L30 129 aa9.67□□□□□ -0.86
ITGA3-207ENST00000506401 H3BPC8 53 aa9.66□□□□□ -0.86
ITGA3-207ENST00000506401 XP32Q5T750 250 aa9.66□□□□□ -0.86
ITGA3-207ENST00000506401 C4orf26Q17RF5 130 aa9.64□□□□□ -0.87
ITGA3-207ENST00000506401 LINC00208Q96KT6 92 aa9.64□□□□□ -0.87
ITGA3-207ENST00000506401 A0A0U1RQV1 116 aa9.63□□□□□ -0.87
ITGA3-207ENST00000506401 ZCCHC13Q8WW36 166 aaKnown RBP9.63□□□□□ -0.87
ITGA3-207ENST00000506401 SNURFQ9Y675 71 aa9.63□□□□□ -0.87
ITGA3-207ENST00000506401 FAM236DA0A1B0GTK5 79 aa9.63□□□□□ -0.87
ITGA3-207ENST00000506401 FAM236CP0DP71 79 aa9.63□□□□□ -0.87
ITGA3-207ENST00000506401 SERP1Q9Y6X1 66 aa9.63□□□□□ -0.87
ITGA3-207ENST00000506401 KLKP1Q107X0 134 aa9.62□□□□□ -0.87
ITGA3-207ENST00000506401 C1orf64Q8NEQ6 169 aa9.61□□□□□ -0.87
ITGA3-207ENST00000506401 RPL37P61927 97 aaKnown RBP9.59□□□□□ -0.87
ITGA3-207ENST00000506401 ATP11AUNQ6ZP68 121 aa9.58□□□□□ -0.88
ITGA3-207ENST00000506401 LOC101927531A0A1B0GV80 90 aa9.56□□□□□ -0.88
ITGA3-207ENST00000506401 H7BZZ5 65 aa9.56□□□□□ -0.88
ITGA3-207ENST00000506401 NDUFC1O43677 76 aa9.54□□□□□ -0.88
ITGA3-207ENST00000506401 SMIM26A0A096LP01 95 aa9.51□□□□□ -0.89
ITGA3-207ENST00000506401 IGKV2-30P06310 120 aa9.51□□□□□ -0.89
ITGA3-207ENST00000506401 ATP5EP56381 51 aaPredicted RBP9.51□□□□□ -0.89
ITGA3-207ENST00000506401 PRO0628Q9UI54 55 aa9.51□□□□□ -0.89
ITGA3-207ENST00000506401 CYP4F30PQ9H0H9 118 aa9.49□□□□□ -0.89
ITGA3-207ENST00000506401 IGKV2D-30A0A075B6S6 120 aa9.49□□□□□ -0.89
ITGA3-207ENST00000506401 LPAP08519 4548 aa9.46□□□□□ -0.89
ITGA3-207ENST00000506401 HERC1Q15751 4861 aa9.46□□□□□ -0.9
ITGA3-207ENST00000506401 C7orf65Q6ZTY9 151 aa9.45□□□□□ -0.9
ITGA3-207ENST00000506401 PCOTHQ58A44 107 aa9.44□□□□□ -0.9
ITGA3-207ENST00000506401 LRP2P98164 4655 aa9.41□□□□□ -0.9
ITGA3-207ENST00000506401 SPINK7P58062 85 aa9.4□□□□□ -0.91
ITGA3-207ENST00000506401 SEC61BP60468 96 aaKnown RBP9.4□□□□□ -0.91
ITGA3-207ENST00000506401 SPANXA2-OT1Q8N9U9 137 aa9.33□□□□□ -0.92
ITGA3-207ENST00000506401 HMCN2Q8NDA2 5059 aa9.33□□□□□ -0.92
ITGA3-207ENST00000506401 HRES1P13985 223 aa9.33□□□□□ -0.92
ITGA3-207ENST00000506401 BRK1Q8WUW1 75 aa9.2□□□□□ -0.94
ITGA3-207ENST00000506401 MUC17Q685J3 4493 aa9.17□□□□□ -0.94
ITGA3-207ENST00000506401 DMAC1Q96GE9 116 aa9.17□□□□□ -0.94
ITGA3-207ENST00000506401 ACYP2P14621 99 aa9.15□□□□□ -0.95
ITGA3-207ENST00000506401 COX6B2Q6YFQ2 88 aa9.15□□□□□ -0.95
ITGA3-207ENST00000506401 A8MUN3 132 aa9.13□□□□□ -0.95
ITGA3-207ENST00000506401 MPLKIPQ8TAP9 179 aa9.13□□□□□ -0.95
ITGA3-207ENST00000506401 KRTAP4-1Q9BYQ7 146 aa9.12□□□□□ -0.95
ITGA3-207ENST00000506401 V9GYY9 64 aa9.12□□□□□ -0.95
ITGA3-207ENST00000506401 RBM12B-AS1Q9P1G2 102 aa9.11□□□□□ -0.95
ITGA3-207ENST00000506401 Q1T7F1 81 aa9.1□□□□□ -0.95
ITGA3-207ENST00000506401 KRTAP3-1Q9BYR8 98 aa9.08□□□□□ -0.96
ITGA3-207ENST00000506401 COA5Q86WW8 74 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms