RNA–Protein interactions for RNA: ENST00000505886.5

PDLIM3-206, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4

Gene PDLIM3, Length 571 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-206ENST00000505886 KRTAP9-2Q9BYQ4 174 aa8.19□□□□□ -1.1
PDLIM3-206ENST00000505886 DSCR10P59022 87 aa8.18□□□□□ -1.1
PDLIM3-206ENST00000505886 C14orf132Q9NPU4 83 aa8.17□□□□□ -1.1
PDLIM3-206ENST00000505886 IGHV6-1A0A0B4J1U7 121 aa8.16□□□□□ -1.1
PDLIM3-206ENST00000505886 DEFB116Q30KQ4 102 aa8.15□□□□□ -1.1
PDLIM3-206ENST00000505886 KRTAP19-2Q3LHN2 52 aa8.15□□□□□ -1.1
PDLIM3-206ENST00000505886 KRTAP16-1A8MUX0 517 aa8.14□□□□□ -1.11
PDLIM3-206ENST00000505886 LCE2CQ5TA81 110 aa8.14□□□□□ -1.11
PDLIM3-206ENST00000505886 SPCS1Q9Y6A9 102 aa8.14□□□□□ -1.11
PDLIM3-206ENST00000505886 A8MWP4 228 aa8.13□□□□□ -1.11
PDLIM3-206ENST00000505886 NREPQ16612 68 aa8.13□□□□□ -1.11
PDLIM3-206ENST00000505886 COX6B2Q6YFQ2 88 aa8.11□□□□□ -1.11
PDLIM3-206ENST00000505886 NOTCH2NLQ7Z3S9 236 aa8.07□□□□□ -1.12
PDLIM3-206ENST00000505886 MT1HP80294 61 aa8.06□□□□□ -1.12
PDLIM3-206ENST00000505886 PRR15Q8IV56 129 aa8.05□□□□□ -1.12
PDLIM3-206ENST00000505886 Q8N9P0 234 aaPredicted RBP8.05□□□□□ -1.12
PDLIM3-206ENST00000505886 K7EP34 96 aa8.04□□□□□ -1.12
PDLIM3-206ENST00000505886 GTF2H5Q6ZYL4 71 aa8.04□□□□□ -1.12
PDLIM3-206ENST00000505886 C8orf17Q9NRJ1 99 aa8.03□□□□□ -1.12
PDLIM3-206ENST00000505886 IGKV3D-7A0A0C4DH55 119 aa8.02□□□□□ -1.13
PDLIM3-206ENST00000505886 MTURNQ8N3F0 131 aa8.01□□□□□ -1.13
PDLIM3-206ENST00000505886 ZCCHC13Q8WW36 166 aaKnown RBP8□□□□□ -1.13
PDLIM3-206ENST00000505886 BPY2O14599 106 aa7.99□□□□□ -1.13
PDLIM3-206ENST00000505886 Q6ZVQ6 151 aa7.99□□□□□ -1.13
PDLIM3-206ENST00000505886 F8W1H4 67 aa7.98□□□□□ -1.13
PDLIM3-206ENST00000505886 PRO0461Q9UI25 63 aa7.98□□□□□ -1.13
PDLIM3-206ENST00000505886 M0R2T5 61 aa7.97□□□□□ -1.13
PDLIM3-206ENST00000505886 SMCPP49901 116 aaPredicted RBP7.97□□□□□ -1.13
PDLIM3-206ENST00000505886 RBM12B-AS1Q9P1G2 102 aa7.97□□□□□ -1.13
PDLIM3-206ENST00000505886 KRTAP9-6A0A140TA67 174 aa7.96□□□□□ -1.14
PDLIM3-206ENST00000505886 TMEM254Q8TBM7 123 aa7.96□□□□□ -1.14
PDLIM3-206ENST00000505886 LCE2DQ5TA82 110 aaPredicted RBP7.95□□□□□ -1.14
PDLIM3-206ENST00000505886 UBL5Q9BZL1 73 aa7.95□□□□□ -1.14
PDLIM3-206ENST00000505886 MRPL34Q9BQ48 92 aaKnown RBP7.93□□□□□ -1.14
PDLIM3-206ENST00000505886 MMP24-AS1A0A0U1RRL7 71 aa7.92□□□□□ -1.14
PDLIM3-206ENST00000505886 hDV103S1A0JD37 113 aa7.92□□□□□ -1.14
PDLIM3-206ENST00000505886 PCP4L1A6NKN8 68 aa7.92□□□□□ -1.14
PDLIM3-206ENST00000505886 MPLKIPQ8TAP9 179 aa7.92□□□□□ -1.14
PDLIM3-206ENST00000505886 K7EQZ3 153 aa7.91□□□□□ -1.14
PDLIM3-206ENST00000505886 LORP23490 312 aaPredicted RBP7.89□□□□□ -1.15
PDLIM3-206ENST00000505886 KRTAP10-6P60371 365 aaPredicted RBP7.89□□□□□ -1.15
PDLIM3-206ENST00000505886 HRES1P13985 223 aa7.88□□□□□ -1.15
PDLIM3-206ENST00000505886 SPINK7P58062 85 aa7.88□□□□□ -1.15
PDLIM3-206ENST00000505886 FAM236DA0A1B0GTK5 79 aa7.87□□□□□ -1.15
PDLIM3-206ENST00000505886 FAM236CP0DP71 79 aa7.87□□□□□ -1.15
PDLIM3-206ENST00000505886 LINC00846Q9NV44 126 aa7.86□□□□□ -1.15
PDLIM3-206ENST00000505886 WFDC13Q8IUB5 93 aa7.84□□□□□ -1.15
PDLIM3-206ENST00000505886 CASC2Q6XLA1 102 aa7.83□□□□□ -1.16
PDLIM3-206ENST00000505886 NDUFS5O43920 106 aa7.82□□□□□ -1.16
PDLIM3-206ENST00000505886 FLGP20930 4061 aaPredicted RBP7.81□□□□□ -1.16
PDLIM3-206ENST00000505886 ACYP1P07311 99 aa7.81□□□□□ -1.16
PDLIM3-206ENST00000505886 CXCL6P80162 114 aa7.81□□□□□ -1.16
PDLIM3-206ENST00000505886 ETDBQ3ZM63 59 aa7.81□□□□□ -1.16
PDLIM3-206ENST00000505886 HCG22E2RYF7 251 aa7.76□□□□□ -1.17
PDLIM3-206ENST00000505886 FAM240AA0A1B0GVK7 77 aa7.75□□□□□ -1.17
PDLIM3-206ENST00000505886 Q8N9L7 120 aa7.75□□□□□ -1.17
PDLIM3-206ENST00000505886 CRCT1Q9UGL9 99 aa7.75□□□□□ -1.17
PDLIM3-206ENST00000505886 C7orf65Q6ZTY9 151 aa7.73□□□□□ -1.17
PDLIM3-206ENST00000505886 TP53AIP1Q9HCN2 124 aa7.73□□□□□ -1.17
PDLIM3-206ENST00000505886 ATP5EP2Q5VTU8 51 aa7.7□□□□□ -1.18
PDLIM3-206ENST00000505886 Q5W150 140 aa7.66□□□□□ -1.18
PDLIM3-206ENST00000505886 FSIP2Q5CZC0 6907 aa7.66□□□□□ -1.18
PDLIM3-206ENST00000505886 KRTAP9-8Q9BYQ0 159 aa7.65□□□□□ -1.18
PDLIM3-206ENST00000505886 IGKV2D-30A0A075B6S6 120 aa7.64□□□□□ -1.19
PDLIM3-206ENST00000505886 IGKV2-30P06310 120 aa7.64□□□□□ -1.19
PDLIM3-206ENST00000505886 H1FX-AS1Q4G0G2 97 aa7.63□□□□□ -1.19
PDLIM3-206ENST00000505886 LINC00643Q86TS7 51 aa7.56□□□□□ -1.2
PDLIM3-206ENST00000505886 J3QR89 54 aa7.53□□□□□ -1.2
PDLIM3-206ENST00000505886 MT2AP02795 61 aa7.53□□□□□ -1.2
PDLIM3-206ENST00000505886 TRAV22A0A0B4J277 110 aa7.5□□□□□ -1.21
PDLIM3-206ENST00000505886 A0A1B0GV90 55 aa7.5□□□□□ -1.21
PDLIM3-206ENST00000505886 HIST1H4AP62805 103 aaKnown RBP7.5□□□□□ -1.21
PDLIM3-206ENST00000505886 KRTAP10-10P60014 251 aa7.49□□□□□ -1.21
PDLIM3-206ENST00000505886 C4orf26Q17RF5 130 aa7.49□□□□□ -1.21
PDLIM3-206ENST00000505886 LOC101927531A0A1B0GV80 90 aa7.48□□□□□ -1.21
PDLIM3-206ENST00000505886 ATOX1O00244 68 aa7.48□□□□□ -1.21
PDLIM3-206ENST00000505886 UQCRQO14949 82 aa7.48□□□□□ -1.21
PDLIM3-206ENST00000505886 MT1FP04733 61 aa7.45□□□□□ -1.22
PDLIM3-206ENST00000505886 CYP4F30PQ9H0H9 118 aa7.43□□□□□ -1.22
PDLIM3-206ENST00000505886 C1orf64Q8NEQ6 169 aa7.42□□□□□ -1.22
PDLIM3-206ENST00000505886 KRTAP9-3Q9BYQ3 159 aa7.41□□□□□ -1.22
PDLIM3-206ENST00000505886 CSAG1Q6PB30 78 aa7.36□□□□□ -1.23
PDLIM3-206ENST00000505886 KRTAP3-1Q9BYR8 98 aa7.36□□□□□ -1.23
PDLIM3-206ENST00000505886 S4R3F8 94 aa7.36□□□□□ -1.23
PDLIM3-206ENST00000505886 H0Y9P7 68 aa7.34□□□□□ -1.23
PDLIM3-206ENST00000505886 A0A087WVE0 104 aa7.33□□□□□ -1.24
PDLIM3-206ENST00000505886 MP68P56378 58 aa7.31□□□□□ -1.24
PDLIM3-206ENST00000505886 C5orf47Q569G3 176 aa7.31□□□□□ -1.24
PDLIM3-206ENST00000505886 A8MUN3 132 aa7.3□□□□□ -1.24
PDLIM3-206ENST00000505886 H3BPC8 53 aa7.29□□□□□ -1.24
PDLIM3-206ENST00000505886 LCE2BO14633 110 aa7.29□□□□□ -1.24
PDLIM3-206ENST00000505886 OCR1Q9BZK8 76 aa7.29□□□□□ -1.24
PDLIM3-206ENST00000505886 IMUPQ9GZP8 106 aa7.29□□□□□ -1.24
PDLIM3-206ENST00000505886 K7ERU9 68 aa7.27□□□□□ -1.25
PDLIM3-206ENST00000505886 LCA10Q71F78 164 aa7.27□□□□□ -1.25
PDLIM3-206ENST00000505886 SCGB1A1P11684 91 aa7.24□□□□□ -1.25
PDLIM3-206ENST00000505886 USH2AO75445 5202 aa7.24□□□□□ -1.25
PDLIM3-206ENST00000505886 LINC00208Q96KT6 92 aa7.23□□□□□ -1.25
PDLIM3-206ENST00000505886 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.2□□□□□ -1.26
PDLIM3-206ENST00000505886 FAM236AA0A1B0GUQ0 79 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms