RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 KRTAP9-7A8MTY7 169 aa12.24□□□□□ -0.45
HERC4-212ENST00000505760 C8orf87E5RJ46 101 aa12.24□□□□□ -0.45
HERC4-212ENST00000505760 MT1FP04733 61 aa12.22□□□□□ -0.45
HERC4-212ENST00000505760 KRTAP10-10P60014 251 aa12.21□□□□□ -0.45
HERC4-212ENST00000505760 RBM3P98179 157 aaKnown RBP12.21□□□□□ -0.45
HERC4-212ENST00000505760 MTURNQ8N3F0 131 aa12.2□□□□□ -0.46
HERC4-212ENST00000505760 DSCR8Q96T75 97 aa12.2□□□□□ -0.46
HERC4-212ENST00000505760 SCGB1C2P0DMR2 95 aa12.19□□□□□ -0.46
HERC4-212ENST00000505760 PYY3Q5JQD4 70 aa12.19□□□□□ -0.46
HERC4-212ENST00000505760 FCGBPQ9Y6R7 5405 aaPredicted RBP12.16□□□□□ -0.46
HERC4-212ENST00000505760 LCE2BO14633 110 aa12.15□□□□□ -0.46
HERC4-212ENST00000505760 ZCCHC13Q8WW36 166 aaKnown RBP12.15□□□□□ -0.46
HERC4-212ENST00000505760 J3KT08 172 aa12.14□□□□□ -0.47
HERC4-212ENST00000505760 KRTAP9-3Q9BYQ3 159 aa12.13□□□□□ -0.47
HERC4-212ENST00000505760 UQCR10Q9UDW1 63 aa12.13□□□□□ -0.47
HERC4-212ENST00000505760 C21orf62-AS1Q17RA5 79 aa12.12□□□□□ -0.47
HERC4-212ENST00000505760 C9JAW5 83 aa12.11□□□□□ -0.47
HERC4-212ENST00000505760 SPINK7P58062 85 aa12.1□□□□□ -0.47
HERC4-212ENST00000505760 BAALC-AS2P0C853 105 aa12.08□□□□□ -0.48
HERC4-212ENST00000505760 KRTAP19-1Q8IUB9 90 aa12.08□□□□□ -0.48
HERC4-212ENST00000505760 NDUFB1O75438 58 aa12.07□□□□□ -0.48
HERC4-212ENST00000505760 Q6ZQT0 140 aa12.06□□□□□ -0.48
HERC4-212ENST00000505760 Q8N9P0 234 aaPredicted RBP12.02□□□□□ -0.49
HERC4-212ENST00000505760 LYRM7Q5U5X0 104 aa12.01□□□□□ -0.49
HERC4-212ENST00000505760 C8orf17Q9NRJ1 99 aa11.97□□□□□ -0.49
HERC4-212ENST00000505760 A8MWP4 228 aa11.96□□□□□ -0.49
HERC4-212ENST00000505760 WFDC13Q8IUB5 93 aa11.96□□□□□ -0.49
HERC4-212ENST00000505760 JMJD7-PLA2G4BH0Y9G9 81 aa11.94□□□□□ -0.5
HERC4-212ENST00000505760 A0A1B0GW54 56 aa11.92□□□□□ -0.5
HERC4-212ENST00000505760 ATXN8Q156A1 80 aa11.91□□□□□ -0.5
HERC4-212ENST00000505760 LOC110117498A0A087WWA1 95 aa11.9□□□□□ -0.5
HERC4-212ENST00000505760 IGKV3D-7A0A0C4DH55 119 aa11.9□□□□□ -0.5
HERC4-212ENST00000505760 TMA7Q9Y2S6 64 aaKnown RBP11.9□□□□□ -0.5
HERC4-212ENST00000505760 Q6ZVQ6 151 aa11.89□□□□□ -0.51
HERC4-212ENST00000505760 PDE6GP18545 87 aa11.87□□□□□ -0.51
HERC4-212ENST00000505760 LINC00846Q9NV44 126 aa11.87□□□□□ -0.51
HERC4-212ENST00000505760 NAA38Q9BRA0 125 aaKnown RBP11.86□□□□□ -0.51
HERC4-212ENST00000505760 C14orf132Q9NPU4 83 aa11.83□□□□□ -0.52
HERC4-212ENST00000505760 M0R143 59 aa11.82□□□□□ -0.52
HERC4-212ENST00000505760 PRR15Q8IV56 129 aa11.82□□□□□ -0.52
HERC4-212ENST00000505760 NREPQ16612 68 aa11.79□□□□□ -0.52
HERC4-212ENST00000505760 KRTAP19-6Q3LI70 58 aa11.78□□□□□ -0.52
HERC4-212ENST00000505760 MACF1Q9UPN3 7388 aaKnown RBP11.76□□□□□ -0.53
HERC4-212ENST00000505760 MRPL34Q9BQ48 92 aaKnown RBP11.76□□□□□ -0.53
HERC4-212ENST00000505760 TMEM254Q8TBM7 123 aa11.75□□□□□ -0.53
HERC4-212ENST00000505760 MMP24-AS1A0A0U1RRL7 71 aa11.74□□□□□ -0.53
HERC4-212ENST00000505760 H1FX-AS1Q4G0G2 97 aa11.71□□□□□ -0.53
HERC4-212ENST00000505760 NDUFS5O43920 106 aa11.7□□□□□ -0.54
HERC4-212ENST00000505760 SYNE2Q8WXH0 6885 aaKnown RBP11.68□□□□□ -0.54
HERC4-212ENST00000505760 hDV103S1A0JD37 113 aa11.68□□□□□ -0.54
HERC4-212ENST00000505760 K7EQZ3 153 aa11.65□□□□□ -0.54
HERC4-212ENST00000505760 IGKV2D-30A0A075B6S6 120 aa11.61□□□□□ -0.55
HERC4-212ENST00000505760 IGKV2-30P06310 120 aa11.61□□□□□ -0.55
HERC4-212ENST00000505760 C7orf65Q6ZTY9 151 aa11.56□□□□□ -0.56
HERC4-212ENST00000505760 BPY2O14599 106 aa11.55□□□□□ -0.56
HERC4-212ENST00000505760 BATFQ16520 125 aa11.54□□□□□ -0.56
HERC4-212ENST00000505760 Q5W150 140 aa11.53□□□□□ -0.56
HERC4-212ENST00000505760 H3BT86 120 aa11.52□□□□□ -0.57
HERC4-212ENST00000505760 SMIM6P0DI80 62 aa11.48□□□□□ -0.57
HERC4-212ENST00000505760 CASC2Q6XLA1 102 aa11.45□□□□□ -0.58
HERC4-212ENST00000505760 TSTD3H0UI37 97 aa11.44□□□□□ -0.58
HERC4-212ENST00000505760 Q8N9L7 120 aa11.44□□□□□ -0.58
HERC4-212ENST00000505760 HCG22E2RYF7 251 aa11.43□□□□□ -0.58
HERC4-212ENST00000505760 C9orf118A6NHY6 69 aa11.42□□□□□ -0.58
HERC4-212ENST00000505760 C4orf26Q17RF5 130 aa11.42□□□□□ -0.58
HERC4-212ENST00000505760 A0A1W2PPM0 123 aa11.39□□□□□ -0.59
HERC4-212ENST00000505760 KRTAP6-3Q3LI67 103 aa11.39□□□□□ -0.59
HERC4-212ENST00000505760 CXCL6P80162 114 aa11.36□□□□□ -0.59
HERC4-212ENST00000505760 TAX1BP3O14907 124 aa11.34□□□□□ -0.59
HERC4-212ENST00000505760 C5orf47Q569G3 176 aa11.33□□□□□ -0.6
HERC4-212ENST00000505760 FAM236AA0A1B0GUQ0 79 aa11.31□□□□□ -0.6
HERC4-212ENST00000505760 FAM236BA0A1B0GV22 79 aa11.31□□□□□ -0.6
HERC4-212ENST00000505760 SMCPP49901 116 aaPredicted RBP11.25□□□□□ -0.61
HERC4-212ENST00000505760 S4R3F8 94 aa11.23□□□□□ -0.61
HERC4-212ENST00000505760 SPCS1Q9Y6A9 102 aa11.22□□□□□ -0.61
HERC4-212ENST00000505760 UBL5Q9BZL1 73 aa11.21□□□□□ -0.61
HERC4-212ENST00000505760 KRTAP3-1Q9BYR8 98 aa11.2□□□□□ -0.62
HERC4-212ENST00000505760 CSAG1Q6PB30 78 aa11.19□□□□□ -0.62
HERC4-212ENST00000505760 A6NN06 94 aa11.17□□□□□ -0.62
HERC4-212ENST00000505760 C1orf64Q8NEQ6 169 aa11.17□□□□□ -0.62
HERC4-212ENST00000505760 Q5VV11 94 aa11.15□□□□□ -0.62
HERC4-212ENST00000505760 LCA10Q71F78 164 aa11.13□□□□□ -0.63
HERC4-212ENST00000505760 MT1BP07438 61 aa11.12□□□□□ -0.63
HERC4-212ENST00000505760 SPRR2GQ9BYE4 73 aa11.09□□□□□ -0.63
HERC4-212ENST00000505760 KRTAP19-8Q3LI54 63 aa11.06□□□□□ -0.64
HERC4-212ENST00000505760 TP53AIP1Q9HCN2 124 aa11.06□□□□□ -0.64
HERC4-212ENST00000505760 PRO0461Q9UI25 63 aa11.03□□□□□ -0.64
HERC4-212ENST00000505760 MUC12Q9UKN1 5478 aa11□□□□□ -0.65
HERC4-212ENST00000505760 KLKP1Q107X0 134 aa10.99□□□□□ -0.65
HERC4-212ENST00000505760 NEBP20929 6669 aa10.99□□□□□ -0.65
HERC4-212ENST00000505760 LOC105371267A0A1B0GV96 52 aa10.98□□□□□ -0.65
HERC4-212ENST00000505760 K7EP34 96 aa10.95□□□□□ -0.66
HERC4-212ENST00000505760 KRTAP10-5P60370 271 aa10.95□□□□□ -0.66
HERC4-212ENST00000505760 COL5A1-AS1Q5SY13 56 aa10.95□□□□□ -0.66
HERC4-212ENST00000505760 CYP4F30PQ9H0H9 118 aa10.88□□□□□ -0.67
HERC4-212ENST00000505760 CRIPTQ9P021 101 aa10.83□□□□□ -0.68
HERC4-212ENST00000505760 IMUPQ9GZP8 106 aa10.81□□□□□ -0.68
HERC4-212ENST00000505760 A0A087WVE0 104 aa10.79□□□□□ -0.68
HERC4-212ENST00000505760 TRAV22A0A0B4J277 110 aa10.78□□□□□ -0.68
HERC4-212ENST00000505760 GTF2H5Q6ZYL4 71 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms