RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 Q6ZQT0 140 aa6.31□□□□□ -1.4
PDLIM7-214ENST00000505746 SS18L2Q9UHA2 77 aa6.31□□□□□ -1.4
PDLIM7-214ENST00000505746 LOC110117498A0A087WWA1 95 aa6.3□□□□□ -1.4
PDLIM7-214ENST00000505746 TRBV7-4A0A0J9YYF1 115 aa6.3□□□□□ -1.4
PDLIM7-214ENST00000505746 CCKP06307 115 aa6.3□□□□□ -1.4
PDLIM7-214ENST00000505746 RBM3P98179 157 aaKnown RBP6.3□□□□□ -1.4
PDLIM7-214ENST00000505746 Q6Q795 121 aa6.29□□□□□ -1.4
PDLIM7-214ENST00000505746 Q96NJ1 140 aa6.29□□□□□ -1.4
PDLIM7-214ENST00000505746 FAM240AA0A1B0GVK7 77 aa6.28□□□□□ -1.4
PDLIM7-214ENST00000505746 GHRHP01286 108 aa6.27□□□□□ -1.41
PDLIM7-214ENST00000505746 DSCR8Q96T75 97 aa6.26□□□□□ -1.41
PDLIM7-214ENST00000505746 LINC00846Q9NV44 126 aa6.26□□□□□ -1.41
PDLIM7-214ENST00000505746 A0A1W2PNM2 257 aa6.25□□□□□ -1.41
PDLIM7-214ENST00000505746 MT-ATP8P03928 68 aa6.25□□□□□ -1.41
PDLIM7-214ENST00000505746 C20orf166-AS1Q96NR2 134 aa6.25□□□□□ -1.41
PDLIM7-214ENST00000505746 FLGP20930 4061 aaPredicted RBP6.24□□□□□ -1.41
PDLIM7-214ENST00000505746 A0A087WSZ3 146 aa6.23□□□□□ -1.41
PDLIM7-214ENST00000505746 ACYP1P07311 99 aa6.23□□□□□ -1.41
PDLIM7-214ENST00000505746 A8MUU9 505 aa6.22□□□□□ -1.41
PDLIM7-214ENST00000505746 PDE6GP18545 87 aa6.2□□□□□ -1.42
PDLIM7-214ENST00000505746 SIGMAR1Q99720 223 aa6.19□□□□□ -1.42
PDLIM7-214ENST00000505746 Q6ZVQ6 151 aa6.18□□□□□ -1.42
PDLIM7-214ENST00000505746 IGKV3D-7A0A0C4DH55 119 aa6.17□□□□□ -1.42
PDLIM7-214ENST00000505746 DSCR10P59022 87 aa6.17□□□□□ -1.42
PDLIM7-214ENST00000505746 LINC00643Q86TS7 51 aa6.17□□□□□ -1.42
PDLIM7-214ENST00000505746 LINC00313P59037 77 aa6.15□□□□□ -1.42
PDLIM7-214ENST00000505746 IGKV4-1P06312 121 aa6.14□□□□□ -1.43
PDLIM7-214ENST00000505746 UBL5Q9BZL1 73 aa6.13□□□□□ -1.43
PDLIM7-214ENST00000505746 C21orf62-AS1Q17RA5 79 aa6.12□□□□□ -1.43
PDLIM7-214ENST00000505746 KRTAP9-8Q9BYQ0 159 aa6.11□□□□□ -1.43
PDLIM7-214ENST00000505746 A0A087WVE0 104 aa6.09□□□□□ -1.43
PDLIM7-214ENST00000505746 FAM236DA0A1B0GTK5 79 aa6.09□□□□□ -1.43
PDLIM7-214ENST00000505746 KRTAP16-1A8MUX0 517 aa6.09□□□□□ -1.43
PDLIM7-214ENST00000505746 FAM236CP0DP71 79 aa6.09□□□□□ -1.43
PDLIM7-214ENST00000505746 NREPQ16612 68 aa6.08□□□□□ -1.44
PDLIM7-214ENST00000505746 DEFB116Q30KQ4 102 aa6.08□□□□□ -1.44
PDLIM7-214ENST00000505746 LINC00472Q9H8W2 130 aa6.08□□□□□ -1.44
PDLIM7-214ENST00000505746 RBM12B-AS1Q9P1G2 102 aa6.08□□□□□ -1.44
PDLIM7-214ENST00000505746 A0A1B0GW54 56 aa6.07□□□□□ -1.44
PDLIM7-214ENST00000505746 ATP5EP2Q5VTU8 51 aa6.07□□□□□ -1.44
PDLIM7-214ENST00000505746 IGHV6-1A0A0B4J1U7 121 aa6.06□□□□□ -1.44
PDLIM7-214ENST00000505746 NOTCH2NLQ7Z3S9 236 aa6.06□□□□□ -1.44
PDLIM7-214ENST00000505746 Q8N9L7 120 aa6.06□□□□□ -1.44
PDLIM7-214ENST00000505746 BPY2O14599 106 aa6.05□□□□□ -1.44
PDLIM7-214ENST00000505746 SCGB1A1P11684 91 aa6.04□□□□□ -1.44
PDLIM7-214ENST00000505746 CXCL6P80162 114 aa6.04□□□□□ -1.44
PDLIM7-214ENST00000505746 IMUPQ9GZP8 106 aa6.04□□□□□ -1.44
PDLIM7-214ENST00000505746 C8orf87E5RJ46 101 aa6.03□□□□□ -1.44
PDLIM7-214ENST00000505746 HRES1P13985 223 aa6.03□□□□□ -1.44
PDLIM7-214ENST00000505746 HIST1H4AP62805 103 aaKnown RBP6.03□□□□□ -1.44
PDLIM7-214ENST00000505746 MPLKIPQ8TAP9 179 aa6.03□□□□□ -1.44
PDLIM7-214ENST00000505746 FAM236AA0A1B0GUQ0 79 aa6.02□□□□□ -1.45
PDLIM7-214ENST00000505746 FAM236BA0A1B0GV22 79 aa6.02□□□□□ -1.45
PDLIM7-214ENST00000505746 A0A1B0GVX0 72 aa6.01□□□□□ -1.45
PDLIM7-214ENST00000505746 MT2AP02795 61 aa6□□□□□ -1.45
PDLIM7-214ENST00000505746 J3KT08 172 aa5.99□□□□□ -1.45
PDLIM7-214ENST00000505746 K7EQZ3 153 aa5.99□□□□□ -1.45
PDLIM7-214ENST00000505746 USH2AO75445 5202 aa5.98□□□□□ -1.45
PDLIM7-214ENST00000505746 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.97□□□□□ -1.45
PDLIM7-214ENST00000505746 PCP4P48539 62 aa5.97□□□□□ -1.45
PDLIM7-214ENST00000505746 ZCCHC13Q8WW36 166 aaKnown RBP5.96□□□□□ -1.46
PDLIM7-214ENST00000505746 NDUFB1O75438 58 aa5.95□□□□□ -1.46
PDLIM7-214ENST00000505746 MT1FP04733 61 aa5.95□□□□□ -1.46
PDLIM7-214ENST00000505746 KRTAP10-10P60014 251 aa5.95□□□□□ -1.46
PDLIM7-214ENST00000505746 SSPOA2VEC9 5147 aa5.95□□□□□ -1.46
PDLIM7-214ENST00000505746 KRTAP9-7A8MTY7 169 aa5.94□□□□□ -1.46
PDLIM7-214ENST00000505746 SPINK7P58062 85 aa5.94□□□□□ -1.46
PDLIM7-214ENST00000505746 A8MWP4 228 aa5.93□□□□□ -1.46
PDLIM7-214ENST00000505746 Q8N9P0 234 aaPredicted RBP5.92□□□□□ -1.46
PDLIM7-214ENST00000505746 ANAPC13Q9BS18 74 aa5.92□□□□□ -1.46
PDLIM7-214ENST00000505746 KRTAP9-3Q9BYQ3 159 aa5.92□□□□□ -1.46
PDLIM7-214ENST00000505746 LCE2BO14633 110 aa5.91□□□□□ -1.46
PDLIM7-214ENST00000505746 PRR15Q8IV56 129 aa5.91□□□□□ -1.46
PDLIM7-214ENST00000505746 MMP24-AS1A0A0U1RRL7 71 aa5.9□□□□□ -1.46
PDLIM7-214ENST00000505746 ATOX1O00244 68 aa5.9□□□□□ -1.46
PDLIM7-214ENST00000505746 WFDC13Q8IUB5 93 aa5.89□□□□□ -1.47
PDLIM7-214ENST00000505746 HCG22E2RYF7 251 aa5.88□□□□□ -1.47
PDLIM7-214ENST00000505746 KRTAP19-1Q8IUB9 90 aa5.88□□□□□ -1.47
PDLIM7-214ENST00000505746 C8orf17Q9NRJ1 99 aa5.88□□□□□ -1.47
PDLIM7-214ENST00000505746 CCDC179H3BU77 68 aa5.86□□□□□ -1.47
PDLIM7-214ENST00000505746 FCGBPQ9Y6R7 5405 aaPredicted RBP5.85□□□□□ -1.47
PDLIM7-214ENST00000505746 CASC2Q6XLA1 102 aa5.84□□□□□ -1.47
PDLIM7-214ENST00000505746 SERP2Q8N6R1 65 aa5.83□□□□□ -1.48
PDLIM7-214ENST00000505746 OCR1Q9BZK8 76 aa5.83□□□□□ -1.48
PDLIM7-214ENST00000505746 TRAV7A0A075B6U4 112 aa5.82□□□□□ -1.48
PDLIM7-214ENST00000505746 COX7CP15954 63 aa5.82□□□□□ -1.48
PDLIM7-214ENST00000505746 hDV103S1A0JD37 113 aa5.8□□□□□ -1.48
PDLIM7-214ENST00000505746 CYSTM1Q9H1C7 97 aa5.79□□□□□ -1.48
PDLIM7-214ENST00000505746 TMEM254Q8TBM7 123 aa5.78□□□□□ -1.48
PDLIM7-214ENST00000505746 MRPL34Q9BQ48 92 aaKnown RBP5.78□□□□□ -1.48
PDLIM7-214ENST00000505746 UQCRQO14949 82 aa5.77□□□□□ -1.49
PDLIM7-214ENST00000505746 SMIM20Q8N5G0 67 aa5.77□□□□□ -1.49
PDLIM7-214ENST00000505746 H1FX-AS1Q4G0G2 97 aa5.75□□□□□ -1.49
PDLIM7-214ENST00000505746 C20orf197Q8N268 126 aa5.75□□□□□ -1.49
PDLIM7-214ENST00000505746 NDUFS5O43920 106 aa5.74□□□□□ -1.49
PDLIM7-214ENST00000505746 KRTAP19-6Q3LI70 58 aa5.74□□□□□ -1.49
PDLIM7-214ENST00000505746 SNURFQ9Y675 71 aa5.73□□□□□ -1.49
PDLIM7-214ENST00000505746 H0Y9P7 68 aa5.69□□□□□ -1.5
PDLIM7-214ENST00000505746 Q5W150 140 aa5.69□□□□□ -1.5
PDLIM7-214ENST00000505746 MACF1Q9UPN3 7388 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms