RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 TRBV20-1A0A075B6N2 111 aa3.4□□□□□ -1.87
VCAN-206ENST00000505615 A0A0G2JQZ4 141 aa3.4□□□□□ -1.87
VCAN-206ENST00000505615 TRBV10-2A0A0K0K1G8 114 aa3.4□□□□□ -1.87
VCAN-206ENST00000505615 TMEM256-PLSCR3K7ERE1 68 aa3.4□□□□□ -1.87
VCAN-206ENST00000505615 LEPROTO15243 131 aa3.4□□□□□ -1.87
VCAN-206ENST00000505615 C10orf91Q5T1B1 145 aa3.4□□□□□ -1.87
VCAN-206ENST00000505615 LINC01549A6NIU2 74 aa3.39□□□□□ -1.87
VCAN-206ENST00000505615 A8MWP4 228 aa3.39□□□□□ -1.87
VCAN-206ENST00000505615 H3BMG7 143 aa3.39□□□□□ -1.87
VCAN-206ENST00000505615 BRK1Q8WUW1 75 aa3.39□□□□□ -1.87
VCAN-206ENST00000505615 OBSCN-AS1Q96MR7 158 aa3.39□□□□□ -1.87
VCAN-206ENST00000505615 PRO1933Q9H354 126 aa3.39□□□□□ -1.87
VCAN-206ENST00000505615 TRAPPC1Q9Y5R8 145 aa3.39□□□□□ -1.87
VCAN-206ENST00000505615 TRAV23DV6A0A075B6W5 121 aa3.38□□□□□ -1.87
VCAN-206ENST00000505615 LOC107984156A0A0G2JMH3 177 aa3.38□□□□□ -1.87
VCAN-206ENST00000505615 KRTAP10-12P60413 245 aa3.38□□□□□ -1.87
VCAN-206ENST00000505615 ARL17AQ8IVW1 177 aa3.38□□□□□ -1.87
VCAN-206ENST00000505615 A0A096LNJ9 63 aa3.37□□□□□ -1.87
VCAN-206ENST00000505615 MEIG1Q5JSS6 88 aa3.37□□□□□ -1.87
VCAN-206ENST00000505615 TMEM170BQ5T4T1 132 aa3.37□□□□□ -1.87
VCAN-206ENST00000505615 ADM2Q7Z4H4 148 aa3.37□□□□□ -1.87
VCAN-206ENST00000505615 HIST3H2BBQ8N257 126 aa3.37□□□□□ -1.87
VCAN-206ENST00000505615 HIST1H2BKO60814 126 aa3.36□□□□□ -1.87
VCAN-206ENST00000505615 HIST1H2BJP06899 126 aa3.36□□□□□ -1.87
VCAN-206ENST00000505615 HIST1H2BLQ99880 126 aa3.36□□□□□ -1.87
VCAN-206ENST00000505615 M0R143 59 aa3.35□□□□□ -1.87
VCAN-206ENST00000505615 HRES1P13985 223 aa3.35□□□□□ -1.87
VCAN-206ENST00000505615 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
VCAN-206ENST00000505615 TTTY13Q9BZ97 58 aa3.35□□□□□ -1.87
VCAN-206ENST00000505615 TMEM218A2RU14 115 aa3.34□□□□□ -1.87
VCAN-206ENST00000505615 A8MUU9 505 aa3.34□□□□□ -1.87
VCAN-206ENST00000505615 TCL1BO95988 128 aa3.34□□□□□ -1.87
VCAN-206ENST00000505615 S100A7L2Q5SY68 101 aa3.34□□□□□ -1.87
VCAN-206ENST00000505615 SPANXA2-OT1Q8N9U9 137 aa3.34□□□□□ -1.87
VCAN-206ENST00000505615 DEFB116Q30KQ4 102 aa3.33□□□□□ -1.88
VCAN-206ENST00000505615 A0A0B4J2C4 111 aa3.32□□□□□ -1.88
VCAN-206ENST00000505615 FAM236AA0A1B0GUQ0 79 aa3.32□□□□□ -1.88
VCAN-206ENST00000505615 FAM236BA0A1B0GV22 79 aa3.32□□□□□ -1.88
VCAN-206ENST00000505615 BAGE3Q86Y29 109 aa3.32□□□□□ -1.88
VCAN-206ENST00000505615 Q96NJ1 140 aa3.32□□□□□ -1.88
VCAN-206ENST00000505615 NAA38Q9BRA0 125 aaKnown RBP3.32□□□□□ -1.88
VCAN-206ENST00000505615 TEX49A0A1B0GTD5 131 aa3.31□□□□□ -1.88
VCAN-206ENST00000505615 K7ERJ3 54 aa3.31□□□□□ -1.88
VCAN-206ENST00000505615 UQCRQO14949 82 aa3.31□□□□□ -1.88
VCAN-206ENST00000505615 IGFL1Q6UW32 110 aa3.31□□□□□ -1.88
VCAN-206ENST00000505615 SOSTDC1Q6X4U4 206 aa3.31□□□□□ -1.88
VCAN-206ENST00000505615 GTF2H5Q6ZYL4 71 aa3.31□□□□□ -1.88
VCAN-206ENST00000505615 DEFB105AQ8NG35 78 aa3.31□□□□□ -1.88
VCAN-206ENST00000505615 MIEN1Q9BRT3 115 aa3.31□□□□□ -1.88
VCAN-206ENST00000505615 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
VCAN-206ENST00000505615 A6NN06 94 aa3.3□□□□□ -1.88
VCAN-206ENST00000505615 HBDP02042 147 aa3.3□□□□□ -1.88
VCAN-206ENST00000505615 HINT1P49773 126 aaPredicted RBP3.3□□□□□ -1.88
VCAN-206ENST00000505615 ELOF1P60002 83 aaKnown RBP3.3□□□□□ -1.88
VCAN-206ENST00000505615 PEA15Q15121 130 aa3.3□□□□□ -1.88
VCAN-206ENST00000505615 Q5W150 140 aa3.3□□□□□ -1.88
VCAN-206ENST00000505615 SPANXDQ9BXN6 97 aa3.3□□□□□ -1.88
VCAN-206ENST00000505615 RPS10P5Q9NQ39 176 aa3.3□□□□□ -1.88
VCAN-206ENST00000505615 IGLV5-48A0A075B6I7 105 aa3.29□□□□□ -1.88
VCAN-206ENST00000505615 MYMXA0A1B0GTQ4 84 aa3.29□□□□□ -1.88
VCAN-206ENST00000505615 C7orf65Q6ZTY9 151 aa3.29□□□□□ -1.88
VCAN-206ENST00000505615 TEN1Q86WV5 123 aa3.29□□□□□ -1.88
VCAN-206ENST00000505615 KRTAP2-1Q9BYU5 128 aa3.29□□□□□ -1.88
VCAN-206ENST00000505615 SMCO4Q9NRQ5 59 aa3.29□□□□□ -1.88
VCAN-206ENST00000505615 PMCHL1Q16048 86 aa3.28□□□□□ -1.88
VCAN-206ENST00000505615 H3BT86 120 aa3.27□□□□□ -1.89
VCAN-206ENST00000505615 COX7BP24311 80 aa3.27□□□□□ -1.89
VCAN-206ENST00000505615 C2orf91Q6ZV80 131 aa3.27□□□□□ -1.89
VCAN-206ENST00000505615 ATOH7Q8N100 152 aa3.27□□□□□ -1.89
VCAN-206ENST00000505615 TRAV12-1A0A0B4J245 112 aa3.26□□□□□ -1.89
VCAN-206ENST00000505615 TRBV7-7A0A0K0K1E9 115 aa3.26□□□□□ -1.89
VCAN-206ENST00000505615 H3BQ85 93 aa3.26□□□□□ -1.89
VCAN-206ENST00000505615 TMEM258P61165 79 aa3.26□□□□□ -1.89
VCAN-206ENST00000505615 HSD52Q0P140 79 aa3.26□□□□□ -1.89
VCAN-206ENST00000505615 COL5A1-AS1Q5SY13 56 aa3.26□□□□□ -1.89
VCAN-206ENST00000505615 COPS9Q8WXC6 57 aa3.26□□□□□ -1.89
VCAN-206ENST00000505615 KRTAP4-3Q9BYR4 195 aa3.26□□□□□ -1.89
VCAN-206ENST00000505615 CCDC179H3BU77 68 aa3.25□□□□□ -1.89
VCAN-206ENST00000505615 NPC2P61916 151 aa3.25□□□□□ -1.89
VCAN-206ENST00000505615 H3BPC8 53 aa3.24□□□□□ -1.89
VCAN-206ENST00000505615 MT1BP07438 61 aa3.24□□□□□ -1.89
VCAN-206ENST00000505615 SPRR2EP22531 72 aa3.23□□□□□ -1.89
VCAN-206ENST00000505615 SPRR2BP35325 72 aa3.23□□□□□ -1.89
VCAN-206ENST00000505615 SPRR2AP35326 72 aa3.23□□□□□ -1.89
VCAN-206ENST00000505615 LINC01545Q5VT33 79 aa3.23□□□□□ -1.89
VCAN-206ENST00000505615 C1orf64Q8NEQ6 169 aa3.23□□□□□ -1.89
VCAN-206ENST00000505615 C18orf32Q8TCD1 76 aa3.23□□□□□ -1.89
VCAN-206ENST00000505615 SNHG12Q9BXW3 62 aa3.23□□□□□ -1.89
VCAN-206ENST00000505615 NHP2Q9NX24 153 aaKnown RBP3.23□□□□□ -1.89
VCAN-206ENST00000505615 TIMM17BO60830 172 aa3.22□□□□□ -1.89
VCAN-206ENST00000505615 FXYD2P54710 66 aa3.22□□□□□ -1.89
VCAN-206ENST00000505615 CLLU1Q5K131 121 aa3.22□□□□□ -1.89
VCAN-206ENST00000505615 TRAV7A0A075B6U4 112 aa3.21□□□□□ -1.9
VCAN-206ENST00000505615 FABP4P15090 132 aa3.21□□□□□ -1.9
VCAN-206ENST00000505615 DSCR10P59022 87 aa3.21□□□□□ -1.9
VCAN-206ENST00000505615 CLEC2BQ92478 149 aa3.21□□□□□ -1.9
VCAN-206ENST00000505615 IFI27L1Q96BM0 104 aa3.21□□□□□ -1.9
VCAN-206ENST00000505615 CHCHD1Q96BP2 118 aaKnown RBP3.21□□□□□ -1.9
VCAN-206ENST00000505615 Q6JHZ5 121 aa3.19□□□□□ -1.9
VCAN-206ENST00000505615 LINC00308Q8TCZ7 52 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms