RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 Q75L30 129 aa7.08□□□□□ -1.28
UBE3D-206ENST00000505226 MDFIQ99750 246 aa7.08□□□□□ -1.28
UBE3D-206ENST00000505226 SPAG11AQ6PDA7 123 aa7.07□□□□□ -1.28
UBE3D-206ENST00000505226 PRKDCP78527 4128 aaKnown RBP7.07□□□□□ -1.28
UBE3D-206ENST00000505226 PSORS1C2Q9UIG4 136 aa7.07□□□□□ -1.28
UBE3D-206ENST00000505226 HRES1P13985 223 aa7.06□□□□□ -1.28
UBE3D-206ENST00000505226 MRPL34Q9BQ48 92 aaKnown RBP7.05□□□□□ -1.28
UBE3D-206ENST00000505226 PLAC8Q9NZF1 115 aa7.05□□□□□ -1.28
UBE3D-206ENST00000505226 A6NED7 52 aa7.04□□□□□ -1.28
UBE3D-206ENST00000505226 Q5W150 140 aa7.03□□□□□ -1.28
UBE3D-206ENST00000505226 SPTSSBQ8NFR3 76 aa7.03□□□□□ -1.28
UBE3D-206ENST00000505226 IGLV5-52A0A0A0MRZ9 124 aa7.03□□□□□ -1.28
UBE3D-206ENST00000505226 ALMS1Q8TCU4 4167 aa7.03□□□□□ -1.28
UBE3D-206ENST00000505226 A0A087WTM6 91 aa7.02□□□□□ -1.29
UBE3D-206ENST00000505226 LINC01558Q9Y6Z2 57 aa7.02□□□□□ -1.29
UBE3D-206ENST00000505226 TGP01266 2768 aa7.01□□□□□ -1.29
UBE3D-206ENST00000505226 DNAH6Q9C0G6 4158 aa7□□□□□ -1.29
UBE3D-206ENST00000505226 MEGF8Q7Z7M0 2845 aa7□□□□□ -1.29
UBE3D-206ENST00000505226 CDK2AP2O75956 126 aa7□□□□□ -1.29
UBE3D-206ENST00000505226 KRTAP13-3Q3SY46 172 aa7□□□□□ -1.29
UBE3D-206ENST00000505226 ZNF861PO60384 105 aa6.99□□□□□ -1.29
UBE3D-206ENST00000505226 SPINK6Q6UWN8 80 aa6.99□□□□□ -1.29
UBE3D-206ENST00000505226 ZNF706Q9Y5V0 76 aaPredicted RBP6.99□□□□□ -1.29
UBE3D-206ENST00000505226 RTL8CO15255 209 aa6.98□□□□□ -1.29
UBE3D-206ENST00000505226 SPINK7P58062 85 aa6.98□□□□□ -1.29
UBE3D-206ENST00000505226 ATP11AUNQ6ZP68 121 aa6.98□□□□□ -1.29
UBE3D-206ENST00000505226 PRR26Q8N8Z3 221 aa6.97□□□□□ -1.29
UBE3D-206ENST00000505226 CDC42SE1Q9NRR8 79 aa6.97□□□□□ -1.29
UBE3D-206ENST00000505226 DNAH11Q96DT5 4516 aa6.96□□□□□ -1.29
UBE3D-206ENST00000505226 A6NN06 94 aa6.96□□□□□ -1.3
UBE3D-206ENST00000505226 NUPR2A6NF83 97 aa6.95□□□□□ -1.3
UBE3D-206ENST00000505226 KTN1-AS1Q86SY8 53 aa6.94□□□□□ -1.3
UBE3D-206ENST00000505226 RBM12B-AS1Q9P1G2 102 aa6.93□□□□□ -1.3
UBE3D-206ENST00000505226 CIRBP-AS1Q8TBR5 109 aa6.93□□□□□ -1.3
UBE3D-206ENST00000505226 J3QL48 77 aa6.93□□□□□ -1.3
UBE3D-206ENST00000505226 DNAH5Q8TE73 4624 aa6.91□□□□□ -1.3
UBE3D-206ENST00000505226 IGLV7-43P04211 117 aa6.89□□□□□ -1.31
UBE3D-206ENST00000505226 LRP1BQ9NZR2 4599 aa6.87□□□□□ -1.31
UBE3D-206ENST00000505226 RETNLBQ9BQ08 111 aa6.87□□□□□ -1.31
UBE3D-206ENST00000505226 ACYP2P14621 99 aa6.84□□□□□ -1.32
UBE3D-206ENST00000505226 DMAC1Q96GE9 116 aa6.83□□□□□ -1.32
UBE3D-206ENST00000505226 LINC00313P59037 77 aa6.81□□□□□ -1.32
UBE3D-206ENST00000505226 C8orf87E5RJ46 101 aa6.81□□□□□ -1.32
UBE3D-206ENST00000505226 KRTAP13-2Q52LG2 175 aa6.81□□□□□ -1.32
UBE3D-206ENST00000505226 SSBP3-AS1Q7Z2R9 100 aa6.81□□□□□ -1.32
UBE3D-206ENST00000505226 PKD1P98161 4303 aa6.79□□□□□ -1.32
UBE3D-206ENST00000505226 C7orf65Q6ZTY9 151 aa6.79□□□□□ -1.32
UBE3D-206ENST00000505226 KRTAP16-1A8MUX0 517 aa6.78□□□□□ -1.32
UBE3D-206ENST00000505226 IGKV2-30P06310 120 aa6.78□□□□□ -1.32
UBE3D-206ENST00000505226 KRTAP10-2P60368 255 aa6.78□□□□□ -1.32
UBE3D-206ENST00000505226 C1orf134Q5TEV5 83 aa6.78□□□□□ -1.32
UBE3D-206ENST00000505226 VPS13BQ7Z7G8 4022 aa6.77□□□□□ -1.33
UBE3D-206ENST00000505226 FAM229AH3BQW9 127 aa6.77□□□□□ -1.33
UBE3D-206ENST00000505226 HYDINQ4G0P3 5121 aa6.74□□□□□ -1.33
UBE3D-206ENST00000505226 DNHD1Q96M86 4753 aa6.74□□□□□ -1.33
UBE3D-206ENST00000505226 FAT2Q9NYQ8 4349 aa6.73□□□□□ -1.33
UBE3D-206ENST00000505226 A0A1B0GU69 56 aa6.72□□□□□ -1.33
UBE3D-206ENST00000505226 ADM2Q7Z4H4 148 aa6.71□□□□□ -1.34
UBE3D-206ENST00000505226 LY6G6CO95867 125 aa6.7□□□□□ -1.34
UBE3D-206ENST00000505226 PRAC1Q96KF2 57 aa6.7□□□□□ -1.34
UBE3D-206ENST00000505226 IGKV2D-30A0A075B6S6 120 aa6.7□□□□□ -1.34
UBE3D-206ENST00000505226 KRTAP1-4P0C5Y4 121 aa6.69□□□□□ -1.34
UBE3D-206ENST00000505226 SPATA8Q6RVD6 105 aa6.68□□□□□ -1.34
UBE3D-206ENST00000505226 KRTAP10-1P60331 282 aa6.68□□□□□ -1.34
UBE3D-206ENST00000505226 Q6ZSA8 131 aa6.65□□□□□ -1.35
UBE3D-206ENST00000505226 MIR22HGQ0VDD5 57 aa6.63□□□□□ -1.35
UBE3D-206ENST00000505226 PLA2G1BP04054 148 aaKnown RBP6.61□□□□□ -1.35
UBE3D-206ENST00000505226 UQCR11O14957 56 aa6.61□□□□□ -1.35
UBE3D-206ENST00000505226 PKHD1P08F94 4074 aa6.6□□□□□ -1.35
UBE3D-206ENST00000505226 Q8N1X5 172 aa6.58□□□□□ -1.36
UBE3D-206ENST00000505226 H3BS24 57 aa6.57□□□□□ -1.36
UBE3D-206ENST00000505226 SPINK1P00995 79 aa6.57□□□□□ -1.36
UBE3D-206ENST00000505226 A0A0A0MQY5 61 aa6.55□□□□□ -1.36
UBE3D-206ENST00000505226 TYMSOSQ8TAI1 123 aa6.55□□□□□ -1.36
UBE3D-206ENST00000505226 LINC01554Q52M75 96 aa6.52□□□□□ -1.36
UBE3D-206ENST00000505226 SACSQ9NZJ4 4579 aa6.51□□□□□ -1.37
UBE3D-206ENST00000505226 FAT1Q14517 4588 aa6.47□□□□□ -1.37
UBE3D-206ENST00000505226 KRTAP3-1Q9BYR8 98 aa6.46□□□□□ -1.38
UBE3D-206ENST00000505226 CSAG1Q6PB30 78 aa6.45□□□□□ -1.38
UBE3D-206ENST00000505226 H0YAA0 97 aa6.44□□□□□ -1.38
UBE3D-206ENST00000505226 LINC00304Q8N9R0 145 aa6.44□□□□□ -1.38
UBE3D-206ENST00000505226 PKHD1L1Q86WI1 4243 aa6.44□□□□□ -1.38
UBE3D-206ENST00000505226 DYNC1H1Q14204 4646 aaKnown RBP6.44□□□□□ -1.38
UBE3D-206ENST00000505226 C9orf92A6NGG3 77 aa6.44□□□□□ -1.38
UBE3D-206ENST00000505226 APOBP04114 4563 aaKnown RBP6.39□□□□□ -1.39
UBE3D-206ENST00000505226 SMR3BP02814 79 aaPredicted RBP6.38□□□□□ -1.39
UBE3D-206ENST00000505226 A8MUU9 505 aa6.38□□□□□ -1.39
UBE3D-206ENST00000505226 RPS29P62273 56 aaKnown RBP6.38□□□□□ -1.39
UBE3D-206ENST00000505226 C20orf166-AS1Q96NR2 134 aa6.38□□□□□ -1.39
UBE3D-206ENST00000505226 A0A1B0GU33 70 aa6.33□□□□□ -1.4
UBE3D-206ENST00000505226 H1FX-AS1Q4G0G2 97 aa6.3□□□□□ -1.4
UBE3D-206ENST00000505226 KRTAP10-4P60372 401 aaPredicted RBP6.3□□□□□ -1.4
UBE3D-206ENST00000505226 FLG2Q5D862 2391 aaPredicted RBP6.28□□□□□ -1.4
UBE3D-206ENST00000505226 HSPG2P98160 4391 aa6.25□□□□□ -1.41
UBE3D-206ENST00000505226 FAT3Q8TDW7 4589 aa6.25□□□□□ -1.41
UBE3D-206ENST00000505226 LRP1Q07954 4544 aaKnown RBP6.24□□□□□ -1.41
UBE3D-206ENST00000505226 KRTAP25-1Q3LHN0 102 aa6.23□□□□□ -1.41
UBE3D-206ENST00000505226 COX6B2Q6YFQ2 88 aa6.23□□□□□ -1.41
UBE3D-206ENST00000505226 CRIPTQ9P021 101 aa6.2□□□□□ -1.42
UBE3D-206ENST00000505226 TNXBP22105 4242 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms